Protein–RNA interactions for Protein: P62891

RPL39, 60S ribosomal protein L39, humanhuman

Known RBP Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P62891 C14orf2-209ENST00000554880 707 ntAPPRIS P1 TSL 3 BASIC4.79□□□□□ -1.64
RPL39P62891 SAXO2-204ENST00000565432 811 ntAPPRIS ALT2 TSL 4 BASIC4.79□□□□□ -1.64
RPL39P62891 RN7SL199P-201ENST00000578752 281 ntBASIC4.79□□□□□ -1.64
RPL39P62891 RN7SL656P-201ENST00000579044 281 ntBASIC4.79□□□□□ -1.64
RPL39P62891 RN7SL786P-201ENST00000579130 298 ntBASIC4.79□□□□□ -1.64
RPL39P62891 RN7SL404P-201ENST00000582421 281 ntBASIC4.79□□□□□ -1.64
RPL39P62891 AC008759.2-201ENST00000585880 600 ntTSL 5 BASIC4.79□□□□□ -1.64
RPL39P62891 MIR663AHG-237ENST00000615682 1030 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
RPL39P62891 Six3os1_4.1-201ENST00000615706 324 ntBASIC4.79□□□□□ -1.64
RPL39P62891 Metazoa_SRP.42-201ENST00000621081 348 ntBASIC4.79□□□□□ -1.64
RPL39P62891 SMIM11B-203ENST00000622934 1193 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
RPL39P62891 AL359745.1-201ENST00000626943 760 ntTSL 5 BASIC4.79□□□□□ -1.64
RPL39P62891 AL513283.1-203ENST00000640010 891 ntTSL 5 BASIC4.79□□□□□ -1.64
RPL39P62891 GCNT2-218ENST00000640968 939 ntTSL 5 BASIC4.79□□□□□ -1.64
RPL39P62891 NFIB-221ENST00000637742 2166 ntTSL 5 BASIC4.79□□□□□ -1.64
RPL39P62891 CYLD-201ENST00000311559 5371 ntTSL 5 BASIC4.79□□□□□ -1.64
RPL39P62891 AFF2-203ENST00000370457 3952 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
RPL39P62891 RAB9B-201ENST00000243298 3748 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
RPL39P62891 KAT14-201ENST00000377681 3483 ntAPPRIS ALT1 TSL 5 BASIC4.79□□□□□ -1.64
RPL39P62891 ZMYND11-216ENST00000602682 1687 ntTSL 5 BASIC4.79□□□□□ -1.64
RPL39P62891 AC096992.2-201ENST00000609553 1684 ntBASIC4.79□□□□□ -1.64
RPL39P62891 AJ009632.2-208ENST00000635525 4123 ntTSL 5 BASIC4.79□□□□□ -1.64
RPL39P62891 ATAD1-202ENST00000328142 2939 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
RPL39P62891 NOX4-214ENST00000532825 2039 ntTSL 2 BASIC4.79□□□□□ -1.64
RPL39P62891 AC105749.1-201ENST00000631338 2008 ntBASIC4.79□□□□□ -1.64
RPL39P62891 AC093227.1-201ENST00000588040 1360 ntTSL 3 BASIC4.78□□□□□ -1.64
RPL39P62891 CDKL4-201ENST00000378803 1567 ntAPPRIS P2 TSL 1 (best) BASIC4.78□□□□□ -1.64
RPL39P62891 ZMYND11-204ENST00000381604 4066 ntTSL 5 BASIC4.78□□□□□ -1.64
RPL39P62891 TMCC1P1-201ENST00000518897 1980 ntBASIC4.78□□□□□ -1.64
RPL39P62891 WDCP-201ENST00000295148 3817 ntAPPRIS P3 TSL 2 BASIC4.78□□□□□ -1.64
RPL39P62891 ZNF615-204ENST00000594083 4020 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
RPL39P62891 RFTN2-201ENST00000295049 5827 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
RPL39P62891 PAICS-201ENST00000264221 3339 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
RPL39P62891 LINC02547-201ENST00000531559 3308 ntTSL 2 BASIC4.78□□□□□ -1.64
RPL39P62891 AL731556.1-201ENST00000394628 3711 ntBASIC4.78□□□□□ -1.64
RPL39P62891 CLCC1-205ENST00000369969 4343 ntTSL 5 BASIC4.78□□□□□ -1.64
RPL39P62891 PYHIN1-203ENST00000368140 2083 ntAPPRIS P4 TSL 1 (best) BASIC4.78□□□□□ -1.64
RPL39P62891 AC007012.2-201ENST00000623206 1676 ntBASIC4.78□□□□□ -1.64
RPL39P62891 GJA10-203ENST00000638915 1479 ntAPPRIS ALT2 TSL 5 BASIC4.78□□□□□ -1.64
RPL39P62891 PPP1R17-202ENST00000409146 569 ntTSL 2 BASIC4.78□□□□□ -1.64
RPL39P62891 RN7SKP89-201ENST00000410774 242 ntBASIC4.78□□□□□ -1.64
RPL39P62891 LINC00463-201ENST00000413501 1147 ntTSL 3 BASIC4.78□□□□□ -1.64
RPL39P62891 CHL1-AS1-201ENST00000417612 913 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
RPL39P62891 AL138828.1-207ENST00000417643 734 ntTSL 5 BASIC4.78□□□□□ -1.64
RPL39P62891 AL162582.1-201ENST00000419196 467 ntTSL 3 BASIC4.78□□□□□ -1.64
RPL39P62891 HLA-DQB1-AS1-201ENST00000419852 552 ntBASIC4.78□□□□□ -1.64
RPL39P62891 OR13C7-201ENST00000424348 959 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
RPL39P62891 AC130472.1-201ENST00000427885 309 ntBASIC4.78□□□□□ -1.64
RPL39P62891 KCNQ5-AS1-201ENST00000429832 1101 ntTSL 5 BASIC4.78□□□□□ -1.64
RPL39P62891 MTRF1-204ENST00000430347 557 ntTSL 5 BASIC4.78□□□□□ -1.64
RPL39P62891 NQO1-204ENST00000439109 924 ntTSL 2 BASIC4.78□□□□□ -1.64
RPL39P62891 AC108039.2-201ENST00000440214 359 ntBASIC4.78□□□□□ -1.64
RPL39P62891 CRYGGP-201ENST00000443337 145 ntBASIC4.78□□□□□ -1.64
RPL39P62891 AC083864.2-201ENST00000446024 482 ntTSL 3 BASIC4.78□□□□□ -1.64
RPL39P62891 HSPA8P3-201ENST00000449300 780 ntBASIC4.78□□□□□ -1.64
RPL39P62891 AC010878.1-201ENST00000456500 1047 ntBASIC4.78□□□□□ -1.64
RPL39P62891 AC127024.1-201ENST00000490847 418 ntBASIC4.78□□□□□ -1.64
RPL39P62891 RN7SL775P-201ENST00000498361 336 ntBASIC4.78□□□□□ -1.64
RPL39P62891 AC112206.2-201ENST00000503106 557 ntTSL 4 BASIC4.78□□□□□ -1.64
RPL39P62891 AC007106.1-201ENST00000509666 600 ntTSL 4 BASIC4.78□□□□□ -1.64
RPL39P62891 AC022639.1-204ENST00000520365 569 ntTSL 4 BASIC4.78□□□□□ -1.64
RPL39P62891 AC008676.1-202ENST00000520658 545 ntTSL 4 BASIC4.78□□□□□ -1.64
RPL39P62891 IGLV3-6-201ENST00000523937 250 ntBASIC4.78□□□□□ -1.64
RPL39P62891 AP001007.2-201ENST00000525429 593 ntTSL 3 BASIC4.78□□□□□ -1.64
RPL39P62891 AP003032.1-201ENST00000526730 277 ntTSL 3 BASIC4.78□□□□□ -1.64
RPL39P62891 AC018523.1-201ENST00000534211 512 ntBASIC4.78□□□□□ -1.64
RPL39P62891 AC079866.1-201ENST00000534985 1220 ntBASIC4.78□□□□□ -1.64
RPL39P62891 AC068790.1-201ENST00000536166 355 ntBASIC4.78□□□□□ -1.64
RPL39P62891 AC084361.1-201ENST00000537730 607 ntTSL 3 BASIC4.78□□□□□ -1.64
RPL39P62891 AC084816.1-211ENST00000540994 485 ntTSL 3 BASIC4.78□□□□□ -1.64
RPL39P62891 AC137767.1-202ENST00000543072 752 ntTSL 2 BASIC4.78□□□□□ -1.64
RPL39P62891 NXPE2P1-201ENST00000543705 726 ntBASIC4.78□□□□□ -1.64
RPL39P62891 FLVCR2-204ENST00000553587 584 ntTSL 2 BASIC4.78□□□□□ -1.64
RPL39P62891 SPATA8-202ENST00000558553 406 ntAPPRIS ALT2 TSL 2 BASIC4.78□□□□□ -1.64
RPL39P62891 AC090181.1-201ENST00000560446 264 ntTSL 3 BASIC4.78□□□□□ -1.64
RPL39P62891 AC004232.1-201ENST00000571388 208 ntBASIC4.78□□□□□ -1.64
RPL39P62891 AC138207.8-206ENST00000580053 637 ntTSL 5 BASIC4.78□□□□□ -1.64
RPL39P62891 IZUMO3-203ENST00000604921 743 ntAPPRIS P2 TSL 5 BASIC4.78□□□□□ -1.64
RPL39P62891 AL109936.2-201ENST00000605350 650 ntBASIC4.78□□□□□ -1.64
RPL39P62891 RN7SL760P-201ENST00000607344 270 ntBASIC4.78□□□□□ -1.64
RPL39P62891 AC027271.1-201ENST00000610270 610 ntBASIC4.78□□□□□ -1.64
RPL39P62891 AC079779.3-218ENST00000612487 940 ntTSL 5 BASIC4.78□□□□□ -1.64
RPL39P62891 EDRF1-AS1-210ENST00000613304 569 ntTSL 5 BASIC4.78□□□□□ -1.64
RPL39P62891 AC068234.2-201ENST00000619646 522 ntBASIC4.78□□□□□ -1.64
RPL39P62891 PPP3CB-AS1-215ENST00000620559 656 ntTSL 5 BASIC4.78□□□□□ -1.64
RPL39P62891 AC079456.1-201ENST00000624010 480 ntBASIC4.78□□□□□ -1.64
RPL39P62891 AL353608.4-201ENST00000624487 1188 ntBASIC4.78□□□□□ -1.64
RPL39P62891 NPLOC4-221ENST00000625705 405 ntTSL 5 BASIC4.78□□□□□ -1.64
RPL39P62891 LAMTOR5-AS1-248ENST00000630488 703 ntTSL 5 BASIC4.78□□□□□ -1.64
RPL39P62891 PDZRN4-201ENST00000298919 3411 ntTSL 2 BASIC4.78□□□□□ -1.64
RPL39P62891 LRRTM4-205ENST00000409911 2976 ntAPPRIS ALT1 TSL 5 BASIC4.78□□□□□ -1.64
RPL39P62891 OSER1-202ENST00000372970 1616 ntAPPRIS P1 TSL 3 BASIC4.78□□□□□ -1.64
RPL39P62891 MYO3B-202ENST00000408978 5529 ntAPPRIS P3 TSL 1 (best) BASIC4.78□□□□□ -1.64
RPL39P62891 AC006511.3-201ENST00000624929 1783 ntBASIC4.78□□□□□ -1.64
RPL39P62891 GCSAML-210ENST00000536561 4063 ntAPPRIS P3 TSL 4 BASIC4.77□□□□□ -1.65
RPL39P62891 ANO4-201ENST00000392977 3509 ntAPPRIS ALT2 TSL 2 BASIC4.77□□□□□ -1.65
RPL39P62891 CDC7-203ENST00000428239 3313 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
RPL39P62891 FGG-204ENST00000405164 1539 ntTSL 5 BASIC4.77□□□□□ -1.65
RPL39P62891 DCC-202ENST00000412726 9525 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
RPL39P62891 DPY19L1P1-201ENST00000417811 2594 ntBASIC4.77□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 142.3 ms