Protein–RNA interactions for Protein: P61024

CKS1B, Cyclin-dependent kinases regulatory subunit 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP61024 FBXO43-201ENST00000428847 2886 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
CKS1BP61024 CNTNAP4-205ENST00000476707 4355 ntTSL 2 BASIC4.91□□□□□ -1.62
CKS1BP61024 RAD54B-202ENST00000336148 3068 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
CKS1BP61024 PRLR-216ENST00000542609 1764 ntTSL 5 BASIC4.91□□□□□ -1.62
CKS1BP61024 RND3-201ENST00000263895 2711 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
CKS1BP61024 GABRR3-202ENST00000472788 1416 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
CKS1BP61024 PSG9-206ENST00000593948 1429 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
CKS1BP61024 KARSP2-201ENST00000415696 1639 ntBASIC4.91□□□□□ -1.62
CKS1BP61024 AL450426.1-201ENST00000635678 1602 ntTSL 5 BASIC4.91□□□□□ -1.62
CKS1BP61024 ICE2P1-201ENST00000512800 1849 ntBASIC4.91□□□□□ -1.62
CKS1BP61024 IL5RA-201ENST00000256452 2001 ntAPPRIS P4 TSL 1 (best) BASIC4.91□□□□□ -1.62
CKS1BP61024 FANCD2-203ENST00000419585 5185 ntAPPRIS ALT2 TSL 1 (best) BASIC4.91□□□□□ -1.62
CKS1BP61024 CSAG4-201ENST00000361201 755 ntTSL 2 BASIC4.91□□□□□ -1.62
CKS1BP61024 AC092952.1-201ENST00000397646 1209 ntBASIC4.91□□□□□ -1.62
CKS1BP61024 C1D-203ENST00000409302 772 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
CKS1BP61024 HSPE1-202ENST00000409468 570 ntTSL 2 BASIC4.91□□□□□ -1.62
CKS1BP61024 AC099560.1-201ENST00000412811 500 ntTSL 4 BASIC4.91□□□□□ -1.62
CKS1BP61024 OR10U1P-201ENST00000414690 905 ntBASIC4.91□□□□□ -1.62
CKS1BP61024 SLC8A1-AS1-202ENST00000417875 344 ntTSL 2 BASIC4.91□□□□□ -1.62
CKS1BP61024 AL929472.2-201ENST00000419993 481 ntTSL 5 BASIC4.91□□□□□ -1.62
CKS1BP61024 RPL4P4-201ENST00000422486 1284 ntBASIC4.91□□□□□ -1.62
CKS1BP61024 SPCS1-202ENST00000423431 822 ntTSL 3 BASIC4.91□□□□□ -1.62
CKS1BP61024 CYP4F32P-201ENST00000426492 504 ntBASIC4.91□□□□□ -1.62
CKS1BP61024 RNF11P2-201ENST00000427702 440 ntBASIC4.91□□□□□ -1.62
CKS1BP61024 RPL35P8-201ENST00000433284 337 ntBASIC4.91□□□□□ -1.62
CKS1BP61024 NEURL1-AS1-201ENST00000447820 439 ntTSL 2 BASIC4.91□□□□□ -1.62
CKS1BP61024 AC096543.2-201ENST00000449140 859 ntTSL 3 BASIC4.91□□□□□ -1.62
CKS1BP61024 AC012493.1-201ENST00000453252 760 ntBASIC4.91□□□□□ -1.62
CKS1BP61024 AZI2-207ENST00000457172 1136 ntTSL 5 BASIC4.91□□□□□ -1.62
CKS1BP61024 C1orf112-208ENST00000496973 782 ntAPPRIS ALT2 TSL 1 (best) BASIC4.91□□□□□ -1.62
CKS1BP61024 GSTO3P-201ENST00000504733 718 ntBASIC4.91□□□□□ -1.62
CKS1BP61024 AC097375.1-201ENST00000507949 488 ntTSL 3 BASIC4.91□□□□□ -1.62
CKS1BP61024 AC112225.1-201ENST00000508230 297 ntBASIC4.91□□□□□ -1.62
CKS1BP61024 LINC00499-203ENST00000510736 587 ntTSL 5 BASIC4.91□□□□□ -1.62
CKS1BP61024 AC106800.3-201ENST00000511389 308 ntBASIC4.91□□□□□ -1.62
CKS1BP61024 NR1I3-233ENST00000515452 1093 ntTSL 2 BASIC4.91□□□□□ -1.62
CKS1BP61024 IGKV2-29-201ENST00000521304 372 ntBASIC4.91□□□□□ -1.62
CKS1BP61024 KLRK1-204ENST00000540818 951 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
CKS1BP61024 LINC02325-203ENST00000554862 733 ntTSL 4 BASIC4.91□□□□□ -1.62
CKS1BP61024 AL132712.1-201ENST00000555967 582 ntTSL 4 BASIC4.91□□□□□ -1.62
CKS1BP61024 AC099524.1-206ENST00000568131 407 ntTSL 3 BASIC4.91□□□□□ -1.62
CKS1BP61024 AC104581.3-201ENST00000573621 348 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
CKS1BP61024 DLGAP1-AS3-201ENST00000577649 1258 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
CKS1BP61024 MIR3135A-201ENST00000578460 77 ntBASIC4.91□□□□□ -1.62
CKS1BP61024 CSAG4-202ENST00000583763 237 ntBASIC4.91□□□□□ -1.62
CKS1BP61024 RN7SL192P-201ENST00000584303 299 ntBASIC4.91□□□□□ -1.62
CKS1BP61024 ZNF528-AS1-204ENST00000601562 1069 ntTSL 5 BASIC4.91□□□□□ -1.62
CKS1BP61024 AP003481.1-202ENST00000608214 503 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
CKS1BP61024 5S_rRNA.20-201ENST00000612104 118 ntBASIC4.91□□□□□ -1.62
CKS1BP61024 AL731556.2-201ENST00000615610 770 ntBASIC4.91□□□□□ -1.62
CKS1BP61024 AC090373.1-201ENST00000623955 603 ntBASIC4.91□□□□□ -1.62
CKS1BP61024 AC073488.5-201ENST00000631993 754 ntBASIC4.91□□□□□ -1.62
CKS1BP61024 LINC01606-203ENST00000519160 2292 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
CKS1BP61024 RAB3B-201ENST00000371655 12844 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
CKS1BP61024 KIN-201ENST00000379562 6348 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
CKS1BP61024 AC011416.1-201ENST00000514947 1732 ntBASIC4.91□□□□□ -1.62
CKS1BP61024 AP000473.2-201ENST00000602659 1537 ntBASIC4.91□□□□□ -1.62
CKS1BP61024 CHMP1B2P-202ENST00000614414 6813 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
CKS1BP61024 LINGO2-204ENST00000613945 2981 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
CKS1BP61024 LNX2-201ENST00000316334 4627 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
CKS1BP61024 LGI1-202ENST00000371418 2381 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
CKS1BP61024 MCF2L2-202ENST00000414362 3031 ntTSL 2 BASIC4.91□□□□□ -1.62
CKS1BP61024 PUS3-203ENST00000530811 1792 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
CKS1BP61024 PRDM2-206ENST00000413440 6175 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
CKS1BP61024 ZNF121-201ENST00000320451 1563 ntAPPRIS P1 TSL 3 BASIC4.91□□□□□ -1.62
CKS1BP61024 CASC23-201ENST00000534076 1563 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
CKS1BP61024 PSMC6-219ENST00000612399 1590 ntAPPRIS P2 TSL 1 (best) BASIC4.91□□□□□ -1.62
CKS1BP61024 C2CD5-206ENST00000536386 3496 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
CKS1BP61024 LINC01844-201ENST00000432677 2237 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
CKS1BP61024 CLK1-215ENST00000621181 1843 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
CKS1BP61024 PCLO-201ENST00000333891 20329 ntAPPRIS P1 TSL 2 BASIC4.9□□□□□ -1.62
CKS1BP61024 ELAVL4-202ENST00000371819 2467 ntAPPRIS ALT1 TSL 2 BASIC4.9□□□□□ -1.62
CKS1BP61024 RALGAPA1P1-201ENST00000443361 6232 ntBASIC4.9□□□□□ -1.62
CKS1BP61024 ZNF600-201ENST00000338230 3829 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
CKS1BP61024 OR56A4-204ENST00000641835 3613 ntAPPRIS P1 BASIC4.9□□□□□ -1.62
CKS1BP61024 SLFN13-201ENST00000285013 8469 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
CKS1BP61024 ADAM29-203ENST00000445694 3244 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
CKS1BP61024 LINC02119-201ENST00000508853 2573 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
CKS1BP61024 TC2N-203ENST00000435962 5146 ntAPPRIS P1 TSL 2 BASIC4.9□□□□□ -1.62
CKS1BP61024 AC133552.1-201ENST00000569988 4007 ntBASIC4.9□□□□□ -1.62
CKS1BP61024 TMEM135-201ENST00000305494 2433 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
CKS1BP61024 OCM-201ENST00000242104 695 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
CKS1BP61024 AL078621.1-201ENST00000272567 768 ntBASIC4.9□□□□□ -1.63
CKS1BP61024 OR51L1-201ENST00000321543 948 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
CKS1BP61024 OR51J1-201ENST00000332043 951 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
CKS1BP61024 RIT1-201ENST00000368322 855 ntTSL 3 BASIC4.9□□□□□ -1.63
CKS1BP61024 COQ3-202ENST00000369240 646 ntTSL 5 BASIC4.9□□□□□ -1.63
CKS1BP61024 IL36G-202ENST00000376489 989 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
CKS1BP61024 PHACTR1-204ENST00000379348 795 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
CKS1BP61024 IFNA16-201ENST00000380216 939 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
CKS1BP61024 IGKV3-15-201ENST00000390252 442 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
CKS1BP61024 TRBV9-201ENST00000390363 390 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
CKS1BP61024 NDUFV2-202ENST00000400033 942 ntTSL 3 BASIC4.9□□□□□ -1.63
CKS1BP61024 RNA5SP251-201ENST00000410614 137 ntBASIC4.9□□□□□ -1.63
CKS1BP61024 AL008626.1-201ENST00000412357 775 ntTSL 2 BASIC4.9□□□□□ -1.63
CKS1BP61024 RPL7AP72-201ENST00000417266 768 ntBASIC4.9□□□□□ -1.63
CKS1BP61024 IYD-207ENST00000425615 684 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
CKS1BP61024 AC004160.2-201ENST00000425837 563 ntTSL 4 BASIC4.9□□□□□ -1.63
CKS1BP61024 BMS1P12-201ENST00000428213 706 ntBASIC4.9□□□□□ -1.63
CKS1BP61024 RPL7P7-201ENST00000428803 703 ntBASIC4.9□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 91.5 ms