Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 CFAP61-210ENST00000451767 1946 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
CD40P25942 RPSAP44-201ENST00000406712 884 ntBASIC6.61□□□□□ -1.35
CD40P25942 AC092042.2-201ENST00000417304 331 ntBASIC6.61□□□□□ -1.35
CD40P25942 AC008173.1-201ENST00000418901 264 ntBASIC6.61□□□□□ -1.35
CD40P25942 RPL36P1-201ENST00000419720 225 ntBASIC6.61□□□□□ -1.35
CD40P25942 AC008758.2-201ENST00000420038 695 ntTSL 2 BASIC6.61□□□□□ -1.35
CD40P25942 LINC01497-201ENST00000420427 665 ntTSL 3 BASIC6.61□□□□□ -1.35
CD40P25942 AC074035.1-201ENST00000420725 1184 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
CD40P25942 AC012560.1-202ENST00000421324 535 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
CD40P25942 AC092162.2-203ENST00000430460 579 ntTSL 4 BASIC6.61□□□□□ -1.35
CD40P25942 AC019055.1-201ENST00000432822 443 ntTSL 3 BASIC6.61□□□□□ -1.35
CD40P25942 AL162231.2-201ENST00000434627 665 ntTSL 2 BASIC6.61□□□□□ -1.35
CD40P25942 LINC01688-201ENST00000435492 259 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
CD40P25942 AL355306.2-209ENST00000437803 357 ntTSL 2 BASIC6.61□□□□□ -1.35
CD40P25942 CR391992.1-201ENST00000438601 394 ntBASIC6.61□□□□□ -1.35
CD40P25942 NDUFAF4P2-201ENST00000445374 520 ntBASIC6.61□□□□□ -1.35
CD40P25942 AC005358.1-201ENST00000445508 1143 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
CD40P25942 AL358794.1-201ENST00000445689 381 ntBASIC6.61□□□□□ -1.35
CD40P25942 AC013399.1-201ENST00000450311 418 ntBASIC6.61□□□□□ -1.35
CD40P25942 AC108868.2-201ENST00000451464 511 ntTSL 2 BASIC6.61□□□□□ -1.35
CD40P25942 AC121764.2-201ENST00000469806 587 ntTSL 2 BASIC6.61□□□□□ -1.35
CD40P25942 FCRL2-205ENST00000469986 902 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
CD40P25942 GRHL1-206ENST00000480736 572 ntTSL 4 BASIC6.61□□□□□ -1.35
CD40P25942 MTCO3P35-201ENST00000485582 781 ntBASIC6.61□□□□□ -1.35
CD40P25942 AC097263.1-201ENST00000496795 606 ntBASIC6.61□□□□□ -1.35
CD40P25942 AC096576.3-201ENST00000505528 721 ntTSL 5 BASIC6.61□□□□□ -1.35
CD40P25942 AC104803.1-201ENST00000506917 529 ntTSL 3 BASIC6.61□□□□□ -1.35
CD40P25942 AC139720.1-201ENST00000509497 512 ntTSL 3 BASIC6.61□□□□□ -1.35
CD40P25942 AP003110.1-201ENST00000526976 717 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
CD40P25942 DHX8-202ENST00000540306 3809 ntTSL 2 BASIC6.61□□□□□ -1.35
CD40P25942 FOXG1-AS1-203ENST00000551395 602 ntTSL 4 BASIC6.61□□□□□ -1.35
CD40P25942 AL358332.1-201ENST00000555649 813 ntTSL 5 BASIC6.61□□□□□ -1.35
CD40P25942 AC093524.1-201ENST00000564266 1094 ntBASIC6.61□□□□□ -1.35
CD40P25942 AC114488.2-207ENST00000585660 700 ntTSL 5 BASIC6.61□□□□□ -1.35
CD40P25942 ZNF585A-205ENST00000588354 596 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
CD40P25942 AC007136.1-201ENST00000589141 199 ntBASIC6.61□□□□□ -1.35
CD40P25942 UBA52-209ENST00000597451 514 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
CD40P25942 AC012370.2-202ENST00000600508 1099 ntTSL 5 BASIC6.61□□□□□ -1.35
CD40P25942 AL353804.2-201ENST00000603360 347 ntTSL 5 BASIC6.61□□□□□ -1.35
CD40P25942 AC093783.1-201ENST00000612976 329 ntBASIC6.61□□□□□ -1.35
CD40P25942 VN1R9P-201ENST00000614184 867 ntBASIC6.61□□□□□ -1.35
CD40P25942 FAM27E3-202ENST00000614611 340 ntBASIC6.61□□□□□ -1.35
CD40P25942 Metazoa_SRP.167-201ENST00000614947 260 ntBASIC6.61□□□□□ -1.35
CD40P25942 AC006449.1-201ENST00000616263 571 ntTSL 4 BASIC6.61□□□□□ -1.35
CD40P25942 MALAT1-208ENST00000616527 572 ntTSL 3 BASIC6.61□□□□□ -1.35
CD40P25942 AC011330.2-201ENST00000621680 635 ntBASIC6.61□□□□□ -1.35
CD40P25942 AL451054.1-201ENST00000621770 772 ntBASIC6.61□□□□□ -1.35
CD40P25942 AC007204.1-201ENST00000621794 555 ntBASIC6.61□□□□□ -1.35
CD40P25942 AC119674.1-209ENST00000642031 997 ntBASIC6.61□□□□□ -1.35
CD40P25942 AC096564.2-201ENST00000512428 3147 ntTSL 5 BASIC6.61□□□□□ -1.35
CD40P25942 CCDC73-203ENST00000531481 4381 ntAPPRIS ALT2 TSL 2 BASIC6.61□□□□□ -1.35
CD40P25942 MAGEB18-201ENST00000325250 1811 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
CD40P25942 MORF4L2-208ENST00000441076 1828 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
CD40P25942 TM4SF1-201ENST00000305366 1771 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
CD40P25942 NBR1-201ENST00000341165 4656 ntAPPRIS P3 TSL 1 (best) BASIC6.61□□□□□ -1.35
CD40P25942 ATP2B4-201ENST00000341360 4658 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
CD40P25942 AC008498.2-201ENST00000624033 2322 ntBASIC6.61□□□□□ -1.35
CD40P25942 ZMYND8-221ENST00000619049 4027 ntTSL 5 BASIC6.61□□□□□ -1.35
CD40P25942 CCAR1-218ENST00000630771 4540 ntTSL 5 BASIC6.61□□□□□ -1.35
CD40P25942 NAV2-202ENST00000360655 10667 ntAPPRIS ALT2 TSL 1 (best) BASIC6.61□□□□□ -1.35
CD40P25942 STXBP4-203ENST00000405898 2229 ntTSL 5 BASIC6.61□□□□□ -1.35
CD40P25942 GABRB3-225ENST00000638099 2752 ntTSL 5 BASIC6.61□□□□□ -1.35
CD40P25942 UBAP2L-203ENST00000361546 3864 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
CD40P25942 GNG12-201ENST00000370982 4404 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
CD40P25942 BRD8-202ENST00000254900 4388 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
CD40P25942 SLC4A4-203ENST00000351898 3771 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
CD40P25942 GTF2IP1-202ENST00000614592 2047 ntBASIC6.6□□□□□ -1.35
CD40P25942 DAZ2-208ENST00000400493 3516 ntAPPRIS ALT2 TSL 1 (best) BASIC6.6□□□□□ -1.35
CD40P25942 MRPS31-201ENST00000323563 1462 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
CD40P25942 SEC23IP-208ENST00000543134 1461 ntTSL 5 BASIC6.6□□□□□ -1.35
CD40P25942 PLCB1-202ENST00000378637 3864 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
CD40P25942 GRAMD1B-207ENST00000529750 7723 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
CD40P25942 AC087280.2-201ENST00000637205 4822 ntTSL 5 BASIC6.6□□□□□ -1.35
CD40P25942 AC000099.1-202ENST00000413812 1912 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
CD40P25942 SH3D19-203ENST00000409598 5284 ntAPPRIS ALT1 TSL 1 (best) BASIC6.6□□□□□ -1.35
CD40P25942 ANKS1B-215ENST00000549493 3328 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
CD40P25942 TMPRSS11D-201ENST00000283916 2817 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
CD40P25942 SKA2-201ENST00000330137 2798 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
CD40P25942 IRAK4-201ENST00000431837 4147 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
CD40P25942 AC021074.3-201ENST00000476385 1825 ntTSL 2 BASIC6.6□□□□□ -1.35
CD40P25942 AL034397.3-202ENST00000621933 1815 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
CD40P25942 WDR75-201ENST00000314761 2701 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
CD40P25942 PLA2R1-201ENST00000283243 14371 ntAPPRIS P3 TSL 1 (best) BASIC6.6□□□□□ -1.35
CD40P25942 CASP8-203ENST00000323492 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC6.6□□□□□ -1.35
CD40P25942 TAF12-202ENST00000373824 1334 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
CD40P25942 CCL13-201ENST00000225844 851 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
CD40P25942 PPBP-201ENST00000296028 715 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
CD40P25942 PPP1R42-201ENST00000324682 1084 ntAPPRIS P2 TSL 1 (best) BASIC6.6□□□□□ -1.35
CD40P25942 SP140-202ENST00000373645 814 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
CD40P25942 MIR555-201ENST00000384987 96 ntBASIC6.6□□□□□ -1.35
CD40P25942 S100A13-202ENST00000392622 547 ntAPPRIS P1 TSL 2 BASIC6.6□□□□□ -1.35
CD40P25942 ATF1P1-201ENST00000406040 927 ntBASIC6.6□□□□□ -1.35
CD40P25942 RPSAP72-201ENST00000407020 358 ntBASIC6.6□□□□□ -1.35
CD40P25942 U3.31-201ENST00000408113 216 ntBASIC6.6□□□□□ -1.35
CD40P25942 CDY17P-201ENST00000414121 1282 ntBASIC6.6□□□□□ -1.35
CD40P25942 NENFP1-201ENST00000419476 466 ntBASIC6.6□□□□□ -1.35
CD40P25942 AC118470.1-201ENST00000419891 453 ntAPPRIS P1 TSL 3 BASIC6.6□□□□□ -1.35
CD40P25942 RNF11P2-201ENST00000427702 440 ntBASIC6.6□□□□□ -1.35
CD40P25942 CDY8P-201ENST00000428380 1279 ntBASIC6.6□□□□□ -1.35
CD40P25942 AC105393.2-201ENST00000431911 549 ntTSL 4 BASIC6.6□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 66.9 ms