Protein–RNA interactions for Protein: P17096

HMGA1, High mobility group protein HMG-I/HMG-Y, humanhuman

Known RBP Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P17096 AL445465.1-204ENST00000440220 447 ntTSL 3 BASIC7.1□□□□□ -1.27
HMGA1P17096 NDUFB3-204ENST00000454214 547 ntAPPRIS P1 TSL 2 BASIC7.1□□□□□ -1.27
HMGA1P17096 RBMY2HP-201ENST00000457961 720 ntBASIC7.1□□□□□ -1.27
HMGA1P17096 AC078785.2-201ENST00000462010 1253 ntTSL 3 BASIC7.1□□□□□ -1.27
HMGA1P17096 RPS7P10-201ENST00000464254 603 ntBASIC7.1□□□□□ -1.27
HMGA1P17096 PGAP2-210ENST00000464441 699 ntTSL 5 BASIC7.1□□□□□ -1.27
HMGA1P17096 GPX6-202ENST00000474923 716 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
HMGA1P17096 QTRT2-209ENST00000479882 1196 ntTSL 2 BASIC7.1□□□□□ -1.27
HMGA1P17096 TAS2R50-201ENST00000506868 1000 ntAPPRIS P1 BASIC7.1□□□□□ -1.27
HMGA1P17096 AC021220.1-201ENST00000507445 630 ntBASIC7.1□□□□□ -1.27
HMGA1P17096 COPZ1-218ENST00000553231 551 ntTSL 5 BASIC7.1□□□□□ -1.27
HMGA1P17096 AC138811.2-201ENST00000567078 764 ntAPPRIS P1 TSL 3 BASIC7.1□□□□□ -1.27
HMGA1P17096 STRADA-207ENST00000578008 1153 ntTSL 5 BASIC7.1□□□□□ -1.27
HMGA1P17096 ZNF790-AS1-201ENST00000587278 653 ntTSL 5 BASIC7.1□□□□□ -1.27
HMGA1P17096 AC091133.5-201ENST00000603088 301 ntBASIC7.1□□□□□ -1.27
HMGA1P17096 Z98949.1-213ENST00000608921 856 ntTSL 5 BASIC7.1□□□□□ -1.27
HMGA1P17096 OFCC1-218ENST00000622909 754 ntAPPRIS ALT2 TSL 5 BASIC7.1□□□□□ -1.27
HMGA1P17096 AL049767.1-201ENST00000636811 514 ntTSL 5 BASIC7.1□□□□□ -1.27
HMGA1P17096 TAF1-203ENST00000373790 7629 ntAPPRIS ALT2 TSL 1 (best) BASIC7.1□□□□□ -1.27
HMGA1P17096 ZNF519-207ENST00000590202 2830 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
HMGA1P17096 OR51M1-203ENST00000642046 4092 ntAPPRIS P1 BASIC7.1□□□□□ -1.27
HMGA1P17096 DOCK2-211ENST00000520908 4654 ntTSL 2 BASIC7.1□□□□□ -1.27
HMGA1P17096 AMOT-202ENST00000371958 2462 ntAPPRIS ALT2 TSL 5 BASIC7.1□□□□□ -1.27
HMGA1P17096 PSD3-220ENST00000615573 5843 ntTSL 5 BASIC7.1□□□□□ -1.27
HMGA1P17096 GPCPD1-201ENST00000379019 5489 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
HMGA1P17096 LINC00907-205ENST00000589068 1812 ntTSL 2 BASIC7.1□□□□□ -1.27
HMGA1P17096 TTC21A-203ENST00000431162 4209 ntAPPRIS ALT2 TSL 1 (best) BASIC7.1□□□□□ -1.27
HMGA1P17096 FAM13A-218ENST00000511976 3579 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
HMGA1P17096 CHORDC1-201ENST00000320585 2654 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
HMGA1P17096 GPR19-203ENST00000540510 1751 ntAPPRIS P1 TSL 2 BASIC7.1□□□□□ -1.27
HMGA1P17096 LIN7A-204ENST00000552864 6112 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
HMGA1P17096 DZANK1-203ENST00000357236 3739 ntAPPRIS ALT2 TSL 5 BASIC7.1□□□□□ -1.27
HMGA1P17096 ADH7-201ENST00000209665 2289 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
HMGA1P17096 GRIA4-206ENST00000525187 2822 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
HMGA1P17096 CYP2C8-212ENST00000623108 1962 ntTSL 2 BASIC7.09□□□□□ -1.27
HMGA1P17096 LINC01505-203ENST00000435485 1686 ntTSL 5 BASIC7.09□□□□□ -1.27
HMGA1P17096 SGO1-AS1-205ENST00000634837 1677 ntTSL 5 BASIC7.09□□□□□ -1.27
HMGA1P17096 GRPR-201ENST00000380289 1929 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
HMGA1P17096 OR14A16-202ENST00000641093 1367 ntAPPRIS P1 BASIC7.09□□□□□ -1.27
HMGA1P17096 AC034111.1-201ENST00000562143 3770 ntBASIC7.09□□□□□ -1.27
HMGA1P17096 ZNF410-205ENST00000442160 2076 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
HMGA1P17096 ROBO1-202ENST00000464233 6742 ntAPPRIS ALT2 TSL 5 BASIC7.09□□□□□ -1.27
HMGA1P17096 TRPS1-212ENST00000640765 9514 ntTSL 2 BASIC7.09□□□□□ -1.27
HMGA1P17096 OR13F1-201ENST00000334726 960 ntAPPRIS P1 BASIC7.09□□□□□ -1.27
HMGA1P17096 RNA5SP321-201ENST00000362722 111 ntBASIC7.09□□□□□ -1.27
HMGA1P17096 LYZL1-201ENST00000375500 815 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
HMGA1P17096 VIM2P-201ENST00000402383 1294 ntBASIC7.09□□□□□ -1.27
HMGA1P17096 CYCSP17-201ENST00000407870 315 ntBASIC7.09□□□□□ -1.27
HMGA1P17096 RN7SKP188-201ENST00000410789 317 ntBASIC7.09□□□□□ -1.27
HMGA1P17096 RNU2-18P-201ENST00000411224 162 ntBASIC7.09□□□□□ -1.27
HMGA1P17096 AL359962.1-201ENST00000417969 303 ntTSL 5 BASIC7.09□□□□□ -1.27
HMGA1P17096 PAICSP2-201ENST00000429118 1150 ntBASIC7.09□□□□□ -1.27
HMGA1P17096 CLNS1AP1-201ENST00000435954 682 ntBASIC7.09□□□□□ -1.27
HMGA1P17096 AC091849.1-201ENST00000509920 121 ntBASIC7.09□□□□□ -1.27
HMGA1P17096 CENPK-211ENST00000510693 1040 ntTSL 5 BASIC7.09□□□□□ -1.27
HMGA1P17096 RN7SKP183-201ENST00000517169 324 ntBASIC7.09□□□□□ -1.27
HMGA1P17096 AP003033.2-201ENST00000528901 805 ntBASIC7.09□□□□□ -1.27
HMGA1P17096 MIR9-3HG-211ENST00000561037 779 ntTSL 5 BASIC7.09□□□□□ -1.27
HMGA1P17096 AC015923.1-202ENST00000581421 491 ntTSL 2 BASIC7.09□□□□□ -1.27
HMGA1P17096 AC087575.1-201ENST00000585087 229 ntBASIC7.09□□□□□ -1.27
HMGA1P17096 AC023421.2-202ENST00000586213 547 ntTSL 3 BASIC7.09□□□□□ -1.27
HMGA1P17096 AC006262.3-201ENST00000597337 258 ntTSL 3 BASIC7.09□□□□□ -1.27
HMGA1P17096 AC011500.1-201ENST00000601963 469 ntBASIC7.09□□□□□ -1.27
HMGA1P17096 AC026951.2-201ENST00000613847 241 ntBASIC7.09□□□□□ -1.27
HMGA1P17096 AC004241.2-201ENST00000614562 444 ntBASIC7.09□□□□□ -1.27
HMGA1P17096 ZNF268-209ENST00000541009 3773 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
HMGA1P17096 GOLGA6L6-201ENST00000619213 4013 ntAPPRIS P1 TSL 5 BASIC7.09□□□□□ -1.27
HMGA1P17096 TMC3-AS1-206ENST00000612811 2726 ntBASIC7.09□□□□□ -1.27
HMGA1P17096 WDPCP-204ENST00000409199 2466 ntTSL 2 BASIC7.09□□□□□ -1.27
HMGA1P17096 KIF27-201ENST00000297814 4653 ntAPPRIS P3 TSL 1 (best) BASIC7.09□□□□□ -1.27
HMGA1P17096 AL096816.1-201ENST00000623300 2920 ntBASIC7.09□□□□□ -1.27
HMGA1P17096 SLC3A1-204ENST00000409380 2424 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
HMGA1P17096 KCNMA1-212ENST00000406533 5639 ntAPPRIS ALT2 TSL 5 BASIC7.09□□□□□ -1.28
HMGA1P17096 HSD17B4-212ENST00000509514 2314 ntTSL 1 (best) BASIC7.09□□□□□ -1.28
HMGA1P17096 BRD8-202ENST00000254900 4388 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
HMGA1P17096 ZNF841-202ENST00000426391 3620 ntTSL 2 BASIC7.08□□□□□ -1.28
HMGA1P17096 AL008638.3-201ENST00000623027 5182 ntBASIC7.08□□□□□ -1.28
HMGA1P17096 CTNNA1-244ENST00000627109 3831 ntTSL 5 BASIC7.08□□□□□ -1.28
HMGA1P17096 OR8H1-203ENST00000641600 2927 ntAPPRIS P2 BASIC7.08□□□□□ -1.28
HMGA1P17096 LINC01105-203ENST00000431188 3329 ntTSL 5 BASIC7.08□□□□□ -1.28
HMGA1P17096 TLN2-209ENST00000561311 11880 ntAPPRIS P1 TSL 5 BASIC7.08□□□□□ -1.28
HMGA1P17096 SERPINB8-203ENST00000397985 3477 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
HMGA1P17096 SIPA1L1-203ENST00000537413 4129 ntTSL 2 BASIC7.08□□□□□ -1.28
HMGA1P17096 LYSMD3-203ENST00000500869 3863 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
HMGA1P17096 PPM1L-205ENST00000498165 10934 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
HMGA1P17096 MAPK6-201ENST00000261845 5345 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
HMGA1P17096 ATP6V0E1-201ENST00000265093 773 ntTSL 2 BASIC7.08□□□□□ -1.28
HMGA1P17096 SCGB1D4-201ENST00000358585 439 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
HMGA1P17096 SNORA64.3-201ENST00000365647 134 ntBASIC7.08□□□□□ -1.28
HMGA1P17096 AC104823.1-201ENST00000413290 989 ntTSL 2 BASIC7.08□□□□□ -1.28
HMGA1P17096 AL358394.1-201ENST00000422807 535 ntTSL 2 BASIC7.08□□□□□ -1.28
HMGA1P17096 LINC00575-201ENST00000426551 910 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
HMGA1P17096 LINC00328-2P-201ENST00000436585 219 ntBASIC7.08□□□□□ -1.28
HMGA1P17096 SNRPBP1-201ENST00000443634 282 ntBASIC7.08□□□□□ -1.28
HMGA1P17096 RPL26P30-201ENST00000453533 435 ntBASIC7.08□□□□□ -1.28
HMGA1P17096 GUSBP9-201ENST00000510138 584 ntBASIC7.08□□□□□ -1.28
HMGA1P17096 ZFAND1-204ENST00000517588 633 ntTSL 2 BASIC7.08□□□□□ -1.28
HMGA1P17096 AC084855.1-201ENST00000528696 572 ntTSL 2 BASIC7.08□□□□□ -1.28
HMGA1P17096 C14orf119-202ENST00000554203 725 ntAPPRIS P1 TSL 2 BASIC7.08□□□□□ -1.28
HMGA1P17096 AL445383.1-201ENST00000554689 874 ntBASIC7.08□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 94.2 ms