Protein–RNA interactions for Protein: Q96CF2

CHMP4C, Charged multivesicular body protein 4c, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4CQ96CF2 AC090826.1-201ENST00000564109 915 ntTSL 2 BASIC8.54□□□□□ -1.04
CHMP4CQ96CF2 AC015911.3-201ENST00000592908 849 ntTSL 5 BASIC8.54□□□□□ -1.04
CHMP4CQ96CF2 AL583859.2-202ENST00000602311 505 ntTSL 5 BASIC8.54□□□□□ -1.04
CHMP4CQ96CF2 AL023806.2-201ENST00000603042 263 ntBASIC8.54□□□□□ -1.04
CHMP4CQ96CF2 MIR7515HG-257ENST00000625915 852 ntTSL 5 BASIC8.54□□□□□ -1.04
CHMP4CQ96CF2 RMDN2-AS1-210ENST00000630021 1053 ntTSL 5 BASIC8.54□□□□□ -1.04
CHMP4CQ96CF2 ENSA-201ENST00000271690 2818 ntAPPRIS ALT1 TSL 1 (best) BASIC8.54□□□□□ -1.04
CHMP4CQ96CF2 IBTK-201ENST00000306270 6054 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
CHMP4CQ96CF2 MDM4-203ENST00000367182 10073 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
CHMP4CQ96CF2 NPHP1-203ENST00000393272 2752 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
CHMP4CQ96CF2 ORC3-206ENST00000546266 2470 ntTSL 2 BASIC8.54□□□□□ -1.04
CHMP4CQ96CF2 ZG16-201ENST00000400752 3132 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
CHMP4CQ96CF2 ELOVL5-201ENST00000304434 2827 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
CHMP4CQ96CF2 DLC1-215ENST00000520226 3556 ntTSL 2 BASIC8.53□□□□□ -1.04
CHMP4CQ96CF2 ZNF211-202ENST00000254182 1959 ntTSL 2 BASIC8.53□□□□□ -1.04
CHMP4CQ96CF2 TMC3-AS1-206ENST00000612811 2726 ntBASIC8.53□□□□□ -1.04
CHMP4CQ96CF2 ADAM3A-207ENST00000490268 2627 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
CHMP4CQ96CF2 TGFBR3-202ENST00000370399 4550 ntAPPRIS ALT1 TSL 1 (best) BASIC8.53□□□□□ -1.04
CHMP4CQ96CF2 PSG6-201ENST00000187910 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC8.53□□□□□ -1.04
CHMP4CQ96CF2 BDNF-AS-201ENST00000499008 2324 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
CHMP4CQ96CF2 SMC1A-201ENST00000322213 9784 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
CHMP4CQ96CF2 DNM1L-202ENST00000358214 3229 ntTSL 5 BASIC8.53□□□□□ -1.04
CHMP4CQ96CF2 WDPCP-204ENST00000409199 2466 ntTSL 2 BASIC8.53□□□□□ -1.04
CHMP4CQ96CF2 NFAT5-202ENST00000354436 13229 ntAPPRIS P4 TSL 1 (best) BASIC8.53□□□□□ -1.04
CHMP4CQ96CF2 LRRTM3-201ENST00000361320 4358 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
CHMP4CQ96CF2 OR5A1-201ENST00000302030 1051 ntAPPRIS P1 BASIC8.53□□□□□ -1.04
CHMP4CQ96CF2 MKX-AS1-201ENST00000412244 745 ntTSL 3 BASIC8.53□□□□□ -1.04
CHMP4CQ96CF2 CASKP1-201ENST00000412870 582 ntBASIC8.53□□□□□ -1.04
CHMP4CQ96CF2 AP001043.1-203ENST00000415824 407 ntTSL 5 BASIC8.53□□□□□ -1.04
CHMP4CQ96CF2 NDUFB3-202ENST00000433898 503 ntAPPRIS P1 TSL 2 BASIC8.53□□□□□ -1.04
CHMP4CQ96CF2 IGKV1OR10-1-201ENST00000442306 329 ntBASIC8.53□□□□□ -1.04
CHMP4CQ96CF2 ST13P21-201ENST00000453250 1098 ntBASIC8.53□□□□□ -1.04
CHMP4CQ96CF2 IGKV1OR22-5-201ENST00000458718 354 ntBASIC8.53□□□□□ -1.04
CHMP4CQ96CF2 AC093627.1-201ENST00000465755 877 ntTSL 3 BASIC8.53□□□□□ -1.04
CHMP4CQ96CF2 AC093766.1-201ENST00000502606 866 ntTSL 3 BASIC8.53□□□□□ -1.04
CHMP4CQ96CF2 AC023078.5-201ENST00000528646 707 ntTSL 3 BASIC8.53□□□□□ -1.04
CHMP4CQ96CF2 AC004494.1-202ENST00000573820 480 ntTSL 4 BASIC8.53□□□□□ -1.04
CHMP4CQ96CF2 ZRANB2-AS2-220ENST00000623721 1133 ntTSL 5 BASIC8.53□□□□□ -1.04
CHMP4CQ96CF2 HIPK2-202ENST00000406875 15049 ntAPPRIS P4 TSL 1 (best) BASIC8.53□□□□□ -1.04
CHMP4CQ96CF2 UTP4-204ENST00000563094 4183 ntTSL 2 BASIC8.53□□□□□ -1.04
CHMP4CQ96CF2 CDY7P-201ENST00000429883 1604 ntBASIC8.53□□□□□ -1.04
CHMP4CQ96CF2 LINC00310-204ENST00000430922 2086 ntTSL 2 BASIC8.53□□□□□ -1.04
CHMP4CQ96CF2 STK4-207ENST00000499879 6161 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
CHMP4CQ96CF2 TTC26-203ENST00000464848 4299 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
CHMP4CQ96CF2 FBXO3-209ENST00000531080 1448 ntTSL 2 BASIC8.53□□□□□ -1.04
CHMP4CQ96CF2 DCAF10-201ENST00000242323 7393 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
CHMP4CQ96CF2 SLC14A1-201ENST00000321925 3971 ntAPPRIS P3 TSL 1 (best) BASIC8.53□□□□□ -1.04
CHMP4CQ96CF2 RRM2-213ENST00000641198 3431 ntAPPRIS P1 BASIC8.52□□□□□ -1.04
CHMP4CQ96CF2 CACNB2-215ENST00000615785 3707 ntTSL 5 BASIC8.52□□□□□ -1.05
CHMP4CQ96CF2 AC092646.2-201ENST00000431242 2095 ntBASIC8.52□□□□□ -1.05
CHMP4CQ96CF2 AC013562.1-201ENST00000519427 1722 ntTSL 2 BASIC8.52□□□□□ -1.05
CHMP4CQ96CF2 ZNF532-224ENST00000591808 5171 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
CHMP4CQ96CF2 ANKRD31-201ENST00000274361 6036 ntAPPRIS P2 TSL 5 BASIC8.52□□□□□ -1.05
CHMP4CQ96CF2 ZNF268-209ENST00000541009 3773 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
CHMP4CQ96CF2 NUMB-201ENST00000355058 3342 ntAPPRIS ALT1 TSL 5 BASIC8.52□□□□□ -1.05
CHMP4CQ96CF2 AL157698.1-201ENST00000415190 1011 ntBASIC8.52□□□□□ -1.05
CHMP4CQ96CF2 NPIPB5-205ENST00000424340 3801 ntAPPRIS P2 TSL 1 (best) BASIC8.52□□□□□ -1.05
CHMP4CQ96CF2 CYP4F32P-201ENST00000426492 504 ntBASIC8.52□□□□□ -1.05
CHMP4CQ96CF2 AL121916.1-201ENST00000429405 308 ntBASIC8.52□□□□□ -1.05
CHMP4CQ96CF2 RPL29P7-201ENST00000440227 457 ntBASIC8.52□□□□□ -1.05
CHMP4CQ96CF2 LINC01431-203ENST00000452395 505 ntTSL 2 BASIC8.52□□□□□ -1.05
CHMP4CQ96CF2 AC000061.1-201ENST00000456270 376 ntTSL 3 BASIC8.52□□□□□ -1.05
CHMP4CQ96CF2 AP005202.1-201ENST00000489915 867 ntBASIC8.52□□□□□ -1.05
CHMP4CQ96CF2 AC008967.1-201ENST00000504843 163 ntBASIC8.52□□□□□ -1.05
CHMP4CQ96CF2 AC011333.1-201ENST00000520587 436 ntTSL 3 BASIC8.52□□□□□ -1.05
CHMP4CQ96CF2 AC107952.1-201ENST00000524200 376 ntBASIC8.52□□□□□ -1.05
CHMP4CQ96CF2 PEX11A-205ENST00000561257 978 ntTSL 2 BASIC8.52□□□□□ -1.05
CHMP4CQ96CF2 AL139317.4-201ENST00000605879 760 ntBASIC8.52□□□□□ -1.05
CHMP4CQ96CF2 CCL23-203ENST00000615050 624 ntAPPRIS P3 TSL 1 (best) BASIC8.52□□□□□ -1.05
CHMP4CQ96CF2 AP003108.4-201ENST00000623917 878 ntBASIC8.52□□□□□ -1.05
CHMP4CQ96CF2 AL132796.3-201ENST00000624703 900 ntBASIC8.52□□□□□ -1.05
CHMP4CQ96CF2 APOL4-203ENST00000352371 3227 ntAPPRIS P4 TSL 1 (best) BASIC8.52□□□□□ -1.05
CHMP4CQ96CF2 SMG1-210ENST00000565224 2372 ntTSL 5 BASIC8.52□□□□□ -1.05
CHMP4CQ96CF2 CFAP65-201ENST00000295729 2259 ntAPPRIS ALT2 TSL 1 (best) BASIC8.52□□□□□ -1.05
CHMP4CQ96CF2 ZCCHC6-204ENST00000375957 2262 ntTSL 2 BASIC8.52□□□□□ -1.05
CHMP4CQ96CF2 ERVW-1-202ENST00000603053 2763 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
CHMP4CQ96CF2 UIMC1-207ENST00000506128 1945 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
CHMP4CQ96CF2 ZHX3-205ENST00000432768 3551 ntAPPRIS P1 TSL 2 BASIC8.52□□□□□ -1.05
CHMP4CQ96CF2 GABRA1-211ENST00000635880 1739 ntAPPRIS P1 TSL 5 BASIC8.51□□□□□ -1.05
CHMP4CQ96CF2 ANGEL2-201ENST00000360506 4323 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
CHMP4CQ96CF2 SETDB1-201ENST00000271640 4437 ntAPPRIS ALT1 TSL 1 (best) BASIC8.51□□□□□ -1.05
CHMP4CQ96CF2 NPHP1-201ENST00000316534 3756 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
CHMP4CQ96CF2 ADAL-202ENST00000422466 3767 ntTSL 5 BASIC8.51□□□□□ -1.05
CHMP4CQ96CF2 C9orf57-201ENST00000377024 1502 ntAPPRIS P2 TSL 1 (best) BASIC8.51□□□□□ -1.05
CHMP4CQ96CF2 SLC36A4-206ENST00000529184 1917 ntTSL 2 BASIC8.51□□□□□ -1.05
CHMP4CQ96CF2 CFAP61-201ENST00000245957 4082 ntAPPRIS P2 TSL 1 (best) BASIC8.51□□□□□ -1.05
CHMP4CQ96CF2 NPPA-AS1-201ENST00000400892 936 ntTSL 3 BASIC8.51□□□□□ -1.05
CHMP4CQ96CF2 RNU4ATAC2P-201ENST00000408674 126 ntBASIC8.51□□□□□ -1.05
CHMP4CQ96CF2 RN7SKP137-201ENST00000411074 307 ntBASIC8.51□□□□□ -1.05
CHMP4CQ96CF2 OR52N3P-201ENST00000413417 934 ntBASIC8.51□□□□□ -1.05
CHMP4CQ96CF2 AL022100.2-201ENST00000422548 389 ntTSL 3 BASIC8.51□□□□□ -1.05
CHMP4CQ96CF2 LINC01762-201ENST00000423907 454 ntTSL 5 BASIC8.51□□□□□ -1.05
CHMP4CQ96CF2 UQCRHP1-204ENST00000424609 274 ntBASIC8.51□□□□□ -1.05
CHMP4CQ96CF2 AL592114.2-201ENST00000440142 532 ntBASIC8.51□□□□□ -1.05
CHMP4CQ96CF2 AC019186.1-201ENST00000447019 545 ntTSL 3 BASIC8.51□□□□□ -1.05
CHMP4CQ96CF2 AC068491.1-201ENST00000449539 1241 ntBASIC8.51□□□□□ -1.05
CHMP4CQ96CF2 LINC00533-201ENST00000456103 537 ntTSL 3 BASIC8.51□□□□□ -1.05
CHMP4CQ96CF2 AC021074.2-201ENST00000468434 172 ntBASIC8.51□□□□□ -1.05
CHMP4CQ96CF2 AL158068.2-201ENST00000510632 563 ntTSL 4 BASIC8.51□□□□□ -1.05
CHMP4CQ96CF2 AC105999.2-203ENST00000521030 663 ntTSL 3 BASIC8.51□□□□□ -1.05
Retrieved 100 of 98,524 protein–RNA pairs in 101.7 ms