Protein–RNA interactions for Protein: Q6P9A3

ZNF549, Zinc finger protein 549, humanhuman

Predictions only

Length 640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF549Q6P9A3 MAGT1-204ENST00000610432 4019 ntAPPRIS P2 TSL 1 (best) BASIC6.88□□□□□ -1.31
ZNF549Q6P9A3 GABRA6-207ENST00000523217 2393 ntTSL 5 BASIC6.88□□□□□ -1.31
ZNF549Q6P9A3 TLR4-202ENST00000394487 3908 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
ZNF549Q6P9A3 AC099062.1-202ENST00000640362 3864 ntTSL 5 BASIC6.88□□□□□ -1.31
ZNF549Q6P9A3 VTCN1-201ENST00000328189 2289 ntTSL 5 BASIC6.88□□□□□ -1.31
ZNF549Q6P9A3 FMO4-201ENST00000367749 2252 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
ZNF549Q6P9A3 STS-201ENST00000217961 6521 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
ZNF549Q6P9A3 CDH19-203ENST00000540086 1963 ntTSL 2 BASIC6.88□□□□□ -1.31
ZNF549Q6P9A3 TCF4-278ENST00000636400 8343 ntTSL 5 BASIC6.88□□□□□ -1.31
ZNF549Q6P9A3 NCOR1-205ENST00000395857 9501 ntTSL 5 BASIC6.87□□□□□ -1.31
ZNF549Q6P9A3 AMY1B-202ENST00000370080 1787 ntAPPRIS P1 TSL 2 BASIC6.87□□□□□ -1.31
ZNF549Q6P9A3 OLFM4-201ENST00000219022 2897 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
ZNF549Q6P9A3 RBM28-201ENST00000223073 15507 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
ZNF549Q6P9A3 CA1-222ENST00000523953 2785 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
ZNF549Q6P9A3 ZMYM4-201ENST00000314607 6994 ntAPPRIS P1 TSL 2 BASIC6.87□□□□□ -1.31
ZNF549Q6P9A3 PBRM1-202ENST00000337303 4825 ntAPPRIS ALT1 TSL 1 (best) BASIC6.87□□□□□ -1.31
ZNF549Q6P9A3 MROH3P-201ENST00000435735 2676 ntBASIC6.87□□□□□ -1.31
ZNF549Q6P9A3 MDM4-203ENST00000367182 10073 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
ZNF549Q6P9A3 ZNF385B-201ENST00000336917 2610 ntTSL 5 BASIC6.87□□□□□ -1.31
ZNF549Q6P9A3 L3MBTL3-201ENST00000361794 4217 ntAPPRIS P4 TSL 5 BASIC6.87□□□□□ -1.31
ZNF549Q6P9A3 LINC02532-207ENST00000436659 1387 ntTSL 2 BASIC6.87□□□□□ -1.31
ZNF549Q6P9A3 SGK3-201ENST00000345714 4055 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
ZNF549Q6P9A3 PIGN-207ENST00000586566 3891 ntTSL 5 BASIC6.87□□□□□ -1.31
ZNF549Q6P9A3 KLRF1-201ENST00000279545 1091 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
ZNF549Q6P9A3 GNG3-201ENST00000294117 882 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
ZNF549Q6P9A3 SPRR2D-202ENST00000368756 788 ntAPPRIS P1 TSL 2 BASIC6.87□□□□□ -1.31
ZNF549Q6P9A3 RSPH14-202ENST00000406876 519 ntTSL 3 BASIC6.87□□□□□ -1.31
ZNF549Q6P9A3 LINC02257-201ENST00000412445 605 ntTSL 2 BASIC6.87□□□□□ -1.31
ZNF549Q6P9A3 LINC00362-201ENST00000414345 264 ntTSL 2 BASIC6.87□□□□□ -1.31
ZNF549Q6P9A3 CHL1-AS1-201ENST00000417612 913 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
ZNF549Q6P9A3 CENPN-204ENST00000428963 971 ntTSL 2 BASIC6.87□□□□□ -1.31
ZNF549Q6P9A3 AC019185.3-201ENST00000438805 323 ntBASIC6.87□□□□□ -1.31
ZNF549Q6P9A3 AL353803.3-201ENST00000444641 335 ntBASIC6.87□□□□□ -1.31
ZNF549Q6P9A3 LINC01105-205ENST00000450794 580 ntTSL 4 BASIC6.87□□□□□ -1.31
ZNF549Q6P9A3 PCMTD1P3-201ENST00000451824 472 ntBASIC6.87□□□□□ -1.31
ZNF549Q6P9A3 SETP4-201ENST00000455717 868 ntBASIC6.87□□□□□ -1.31
ZNF549Q6P9A3 AC018980.1-201ENST00000457848 862 ntTSL 3 BASIC6.87□□□□□ -1.31
ZNF549Q6P9A3 LINC01006-207ENST00000458645 738 ntTSL 4 BASIC6.87□□□□□ -1.31
ZNF549Q6P9A3 CBX5P1-201ENST00000468470 561 ntBASIC6.87□□□□□ -1.31
ZNF549Q6P9A3 AC026254.2-201ENST00000475295 371 ntBASIC6.87□□□□□ -1.31
ZNF549Q6P9A3 HLTF-AS1-201ENST00000492461 415 ntTSL 3 BASIC6.87□□□□□ -1.31
ZNF549Q6P9A3 EGFLAM-211ENST00000514476 676 ntTSL 2 BASIC6.87□□□□□ -1.31
ZNF549Q6P9A3 AC022784.5-201ENST00000522241 437 ntBASIC6.87□□□□□ -1.31
ZNF549Q6P9A3 AC011410.1-201ENST00000524175 705 ntTSL 5 BASIC6.87□□□□□ -1.31
ZNF549Q6P9A3 OR9L1P-201ENST00000529493 933 ntBASIC6.87□□□□□ -1.31
ZNF549Q6P9A3 AC006518.1-201ENST00000541449 943 ntBASIC6.87□□□□□ -1.31
ZNF549Q6P9A3 AC005736.2-201ENST00000571302 774 ntTSL 2 BASIC6.87□□□□□ -1.31
ZNF549Q6P9A3 ARL17A-205ENST00000573185 581 ntAPPRIS ALT2 TSL 3 BASIC6.87□□□□□ -1.31
ZNF549Q6P9A3 ARL17B-206ENST00000575698 581 ntTSL 3 BASIC6.87□□□□□ -1.31
ZNF549Q6P9A3 AC005837.2-201ENST00000587459 479 ntAPPRIS P1 TSL 5 BASIC6.87□□□□□ -1.31
ZNF549Q6P9A3 SIGLEC31P-201ENST00000594237 551 ntBASIC6.87□□□□□ -1.31
ZNF549Q6P9A3 SIGLECL1-205ENST00000597824 870 ntAPPRIS ALT2 TSL 1 (best) BASIC6.87□□□□□ -1.31
ZNF549Q6P9A3 AL031777.2-201ENST00000611953 196 ntBASIC6.87□□□□□ -1.31
ZNF549Q6P9A3 KLRF1-208ENST00000617889 1241 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
ZNF549Q6P9A3 AP005212.3-201ENST00000619964 528 ntBASIC6.87□□□□□ -1.31
ZNF549Q6P9A3 PPP3CB-AS1-215ENST00000620559 656 ntTSL 5 BASIC6.87□□□□□ -1.31
ZNF549Q6P9A3 AC131009.3-201ENST00000621809 287 ntBASIC6.87□□□□□ -1.31
ZNF549Q6P9A3 AL132796.3-201ENST00000624703 900 ntBASIC6.87□□□□□ -1.31
ZNF549Q6P9A3 ABI1-207ENST00000376142 3576 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
ZNF549Q6P9A3 CACNA1E-209ENST00000621551 14886 ntAPPRIS ALT2 TSL 5 BASIC6.87□□□□□ -1.31
ZNF549Q6P9A3 AC021078.1-201ENST00000499521 8636 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
ZNF549Q6P9A3 USP32-214ENST00000592339 4045 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
ZNF549Q6P9A3 NF1-202ENST00000358273 12425 ntAPPRIS ALT1 TSL 1 (best) BASIC6.87□□□□□ -1.31
ZNF549Q6P9A3 LPAL2-203ENST00000454031 2498 ntBASIC6.87□□□□□ -1.31
ZNF549Q6P9A3 MC2R-201ENST00000327606 3656 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
ZNF549Q6P9A3 PYHIN1-204ENST00000392252 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC6.86□□□□□ -1.31
ZNF549Q6P9A3 IL1RAP-212ENST00000443369 2760 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
ZNF549Q6P9A3 MCCC1-210ENST00000492597 2774 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
ZNF549Q6P9A3 CYP3A5-202ENST00000339843 3320 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
ZNF549Q6P9A3 NPIPB5-205ENST00000424340 3801 ntAPPRIS P2 TSL 1 (best) BASIC6.86□□□□□ -1.31
ZNF549Q6P9A3 ANKS4B-201ENST00000311620 4352 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
ZNF549Q6P9A3 ODF2L-202ENST00000317336 4376 ntTSL 5 BASIC6.86□□□□□ -1.31
ZNF549Q6P9A3 NPIPB15-201ENST00000429990 1428 ntAPPRIS P1 TSL 5 BASIC6.86□□□□□ -1.31
ZNF549Q6P9A3 FMN1-211ENST00000561249 4251 ntAPPRIS ALT2 TSL 5 BASIC6.86□□□□□ -1.31
ZNF549Q6P9A3 RAD17P2-201ENST00000451754 1977 ntBASIC6.86□□□□□ -1.31
ZNF549Q6P9A3 VN1R1-201ENST00000321039 2353 ntAPPRIS P1 BASIC6.86□□□□□ -1.31
ZNF549Q6P9A3 PEX13-201ENST00000295030 4470 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
ZNF549Q6P9A3 HESX1-201ENST00000295934 981 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
ZNF549Q6P9A3 RNA5SP114-201ENST00000363780 113 ntBASIC6.86□□□□□ -1.31
ZNF549Q6P9A3 SNORA70G-201ENST00000383923 142 ntBASIC6.86□□□□□ -1.31
ZNF549Q6P9A3 RPL12P10-201ENST00000413498 498 ntBASIC6.86□□□□□ -1.31
ZNF549Q6P9A3 AP001468.1-201ENST00000415026 557 ntTSL 4 BASIC6.86□□□□□ -1.31
ZNF549Q6P9A3 AC018804.1-201ENST00000430381 618 ntBASIC6.86□□□□□ -1.31
ZNF549Q6P9A3 LINC01221-201ENST00000432488 662 ntTSL 3 BASIC6.86□□□□□ -1.31
ZNF549Q6P9A3 AP001048.1-201ENST00000436359 280 ntTSL 2 BASIC6.86□□□□□ -1.31
ZNF549Q6P9A3 TRMT2B-AS1-201ENST00000443801 205 ntTSL 5 BASIC6.86□□□□□ -1.31
ZNF549Q6P9A3 STARD13-IT1-201ENST00000456087 452 ntTSL 5 BASIC6.86□□□□□ -1.31
ZNF549Q6P9A3 AC079193.1-201ENST00000460497 588 ntBASIC6.86□□□□□ -1.31
ZNF549Q6P9A3 AL049650.1-201ENST00000461548 823 ntAPPRIS P1 TSL 5 BASIC6.86□□□□□ -1.31
ZNF549Q6P9A3 RPSAP48-201ENST00000466509 889 ntBASIC6.86□□□□□ -1.31
ZNF549Q6P9A3 CADM2-AS2-201ENST00000467225 768 ntTSL 5 BASIC6.86□□□□□ -1.31
ZNF549Q6P9A3 RN7SL379P-201ENST00000479912 293 ntBASIC6.86□□□□□ -1.31
ZNF549Q6P9A3 OR10J9P-201ENST00000511932 987 ntBASIC6.86□□□□□ -1.31
ZNF549Q6P9A3 RN7SKP11-201ENST00000517018 287 ntBASIC6.86□□□□□ -1.31
ZNF549Q6P9A3 AC016813.1-201ENST00000521511 735 ntTSL 3 BASIC6.86□□□□□ -1.31
ZNF549Q6P9A3 AC103681.2-201ENST00000527450 567 ntTSL 4 BASIC6.86□□□□□ -1.31
ZNF549Q6P9A3 AP006587.5-201ENST00000532033 739 ntBASIC6.86□□□□□ -1.31
ZNF549Q6P9A3 AC068205.2-201ENST00000532864 771 ntTSL 5 BASIC6.86□□□□□ -1.31
ZNF549Q6P9A3 NXPE2P1-201ENST00000543705 726 ntBASIC6.86□□□□□ -1.31
ZNF549Q6P9A3 AC090673.2-201ENST00000544279 454 ntTSL 3 BASIC6.86□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 130.1 ms