Protein–RNA interactions for Protein: P58872

RHBDL3, Rhomboid-related protein 3, humanhuman

Predictions only

Length 404 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDL3P58872 LINC01919-203ENST00000581198 598 ntTSL 3 BASIC8.3□□□□□ -1.08
RHBDL3P58872 PPP4R1-AS1-201ENST00000582435 379 ntTSL 2 BASIC8.3□□□□□ -1.08
RHBDL3P58872 AC012593.1-208ENST00000587791 696 ntTSL 5 BASIC8.3□□□□□ -1.08
RHBDL3P58872 AC010615.3-201ENST00000597319 394 ntBASIC8.3□□□□□ -1.08
RHBDL3P58872 PRL-202ENST00000615510 1268 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
RHBDL3P58872 AC091544.5-201ENST00000620192 3815 ntBASIC8.3□□□□□ -1.08
RHBDL3P58872 LINC02073-201ENST00000588341 2845 ntTSL 2 BASIC8.3□□□□□ -1.08
RHBDL3P58872 RAB11A-201ENST00000261890 4930 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
RHBDL3P58872 ARHGAP42P4-201ENST00000549782 2934 ntBASIC8.3□□□□□ -1.08
RHBDL3P58872 MAPK10-392ENST00000642103 3126 ntAPPRIS P2 BASIC8.3□□□□□ -1.08
RHBDL3P58872 TANC1-201ENST00000263635 7470 ntAPPRIS P1 TSL 5 BASIC8.3□□□□□ -1.08
RHBDL3P58872 PPARA-203ENST00000407236 9995 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
RHBDL3P58872 LRRC37B-220ENST00000584368 2773 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
RHBDL3P58872 LIG3-202ENST00000378526 8400 ntAPPRIS P4 TSL 1 (best) BASIC8.3□□□□□ -1.08
RHBDL3P58872 AL512329.1-201ENST00000404600 1592 ntBASIC8.3□□□□□ -1.08
RHBDL3P58872 KCNMB2-202ENST00000420517 1563 ntAPPRIS P1 TSL 5 BASIC8.3□□□□□ -1.08
RHBDL3P58872 AC092701.1-201ENST00000623627 1551 ntBASIC8.3□□□□□ -1.08
RHBDL3P58872 PLCG2-201ENST00000359376 3819 ntTSL 5 BASIC8.3□□□□□ -1.08
RHBDL3P58872 LSM8-204ENST00000424702 4030 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
RHBDL3P58872 ZNF415-204ENST00000594011 2630 ntTSL 2 BASIC8.3□□□□□ -1.08
RHBDL3P58872 SCN9A-203ENST00000409672 9768 ntAPPRIS P2 TSL 5 BASIC8.3□□□□□ -1.08
RHBDL3P58872 AMBN-203ENST00000613447 1997 ntAPPRIS ALT2 TSL 5 BASIC8.3□□□□□ -1.08
RHBDL3P58872 ATG2B-202ENST00000359933 13684 ntAPPRIS P1 TSL 5 BASIC8.3□□□□□ -1.08
RHBDL3P58872 LYPD6B-202ENST00000409029 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC8.29□□□□□ -1.08
RHBDL3P58872 AC009690.2-201ENST00000570175 3148 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
RHBDL3P58872 C14orf37-201ENST00000267485 6495 ntAPPRIS P2 TSL 1 (best) BASIC8.29□□□□□ -1.08
RHBDL3P58872 OR5AQ1P-202ENST00000641257 1534 ntBASIC8.29□□□□□ -1.08
RHBDL3P58872 CLSPN-201ENST00000251195 4769 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
RHBDL3P58872 ALS2CR12-207ENST00000439709 1626 ntAPPRIS ALT2 TSL 2 BASIC8.29□□□□□ -1.08
RHBDL3P58872 AP000866.1-202ENST00000529392 2792 ntTSL 2 BASIC8.29□□□□□ -1.08
RHBDL3P58872 PSG1-203ENST00000403380 1722 ntTSL 2 BASIC8.29□□□□□ -1.08
RHBDL3P58872 NUMB-223ENST00000556772 5172 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
RHBDL3P58872 ZNF229-204ENST00000614049 4507 ntAPPRIS P3 TSL 1 (best) BASIC8.29□□□□□ -1.08
RHBDL3P58872 ZCCHC11-201ENST00000257177 5743 ntAPPRIS P4 TSL 1 (best) BASIC8.29□□□□□ -1.08
RHBDL3P58872 SH2D1B-201ENST00000367929 2523 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
RHBDL3P58872 HRH1-203ENST00000431010 4278 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
RHBDL3P58872 TLR1-201ENST00000308979 2849 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
RHBDL3P58872 DOCK5-201ENST00000276440 10075 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
RHBDL3P58872 OR2L2-201ENST00000366479 1134 ntAPPRIS P1 BASIC8.29□□□□□ -1.08
RHBDL3P58872 MLXIP-203ENST00000377037 805 ntTSL 5 BASIC8.29□□□□□ -1.08
RHBDL3P58872 NQO1-202ENST00000379046 1105 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
RHBDL3P58872 CD200R1L-201ENST00000398214 1296 ntAPPRIS P3 TSL 1 (best) BASIC8.29□□□□□ -1.08
RHBDL3P58872 RN7SKP205-201ENST00000410999 307 ntBASIC8.29□□□□□ -1.08
RHBDL3P58872 AL138828.1-204ENST00000413745 898 ntTSL 5 BASIC8.29□□□□□ -1.08
RHBDL3P58872 SMARCE1P1-201ENST00000417747 1186 ntBASIC8.29□□□□□ -1.08
RHBDL3P58872 CDC42P6-201ENST00000421246 576 ntBASIC8.29□□□□□ -1.08
RHBDL3P58872 AL121916.1-201ENST00000429405 308 ntBASIC8.29□□□□□ -1.08
RHBDL3P58872 OSTN-AS1-201ENST00000430375 515 ntTSL 5 BASIC8.29□□□□□ -1.08
RHBDL3P58872 RPEP4-201ENST00000437636 602 ntBASIC8.29□□□□□ -1.08
RHBDL3P58872 AC004470.1-201ENST00000442155 382 ntTSL 5 BASIC8.29□□□□□ -1.08
RHBDL3P58872 RNU7-157P-201ENST00000459600 66 ntBASIC8.29□□□□□ -1.08
RHBDL3P58872 AL133372.1-201ENST00000493565 745 ntBASIC8.29□□□□□ -1.08
RHBDL3P58872 AL117692.1-201ENST00000494283 713 ntBASIC8.29□□□□□ -1.08
RHBDL3P58872 AC008906.1-201ENST00000512856 993 ntTSL 5 BASIC8.29□□□□□ -1.08
RHBDL3P58872 AC010442.1-201ENST00000515583 816 ntBASIC8.29□□□□□ -1.08
RHBDL3P58872 AC087752.2-201ENST00000521219 281 ntBASIC8.29□□□□□ -1.08
RHBDL3P58872 NAV2-IT1-201ENST00000528204 506 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
RHBDL3P58872 AC084851.2-201ENST00000530377 364 ntBASIC8.29□□□□□ -1.08
RHBDL3P58872 AC234775.3-201ENST00000564612 656 ntBASIC8.29□□□□□ -1.08
RHBDL3P58872 AC092376.1-201ENST00000569677 335 ntTSL 2 BASIC8.29□□□□□ -1.08
RHBDL3P58872 MIR3157-201ENST00000578688 85 ntBASIC8.29□□□□□ -1.08
RHBDL3P58872 CCL2-202ENST00000580907 736 ntTSL 2 BASIC8.29□□□□□ -1.08
RHBDL3P58872 AC073539.3-201ENST00000601905 386 ntTSL 3 BASIC8.29□□□□□ -1.08
RHBDL3P58872 AL121583.1-201ENST00000612444 682 ntBASIC8.29□□□□□ -1.08
RHBDL3P58872 CCL15-204ENST00000617897 1073 ntAPPRIS P2 TSL 1 (best) BASIC8.29□□□□□ -1.08
RHBDL3P58872 EDRF1-AS1-214ENST00000622798 526 ntTSL 5 BASIC8.29□□□□□ -1.08
RHBDL3P58872 LINC01141-204ENST00000635564 1008 ntTSL 5 BASIC8.29□□□□□ -1.08
RHBDL3P58872 CALB1-208ENST00000518457 1490 ntTSL 2 BASIC8.29□□□□□ -1.08
RHBDL3P58872 AC009948.5-201ENST00000624360 4406 ntBASIC8.29□□□□□ -1.08
RHBDL3P58872 OR12D2-207ENST00000642051 1496 ntAPPRIS P1 BASIC8.29□□□□□ -1.08
RHBDL3P58872 MAMDC2-AS1-202ENST00000414515 2097 ntTSL 5 BASIC8.29□□□□□ -1.08
RHBDL3P58872 SPAG6-209ENST00000538630 2376 ntTSL 5 BASIC8.29□□□□□ -1.08
RHBDL3P58872 DPCR1-201ENST00000304311 2658 ntAPPRIS ALT2 TSL 5 BASIC8.29□□□□□ -1.08
RHBDL3P58872 NBPF26-204ENST00000615145 2656 ntTSL 5 BASIC8.29□□□□□ -1.08
RHBDL3P58872 ADGRE1-203ENST00000381404 3056 ntTSL 2 BASIC8.29□□□□□ -1.08
RHBDL3P58872 ST18-201ENST00000276480 6187 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
RHBDL3P58872 ZC3H11B-202ENST00000636126 4432 ntAPPRIS ALT1 TSL 2 BASIC8.29□□□□□ -1.08
RHBDL3P58872 DNM1L-205ENST00000414834 4211 ntTSL 2 BASIC8.29□□□□□ -1.08
RHBDL3P58872 GCSAML-202ENST00000366489 4030 ntAPPRIS ALT2 TSL 2 BASIC8.29□□□□□ -1.08
RHBDL3P58872 AC007938.1-201ENST00000562524 2902 ntBASIC8.29□□□□□ -1.08
RHBDL3P58872 CDH18-205ENST00000506372 2432 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
RHBDL3P58872 PIGA-216ENST00000637296 2113 ntTSL 5 BASIC8.29□□□□□ -1.08
RHBDL3P58872 ZCCHC2-204ENST00000586834 4765 ntAPPRIS ALT2 TSL 1 (best) BASIC8.29□□□□□ -1.08
RHBDL3P58872 PRLR-212ENST00000513753 1525 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
RHBDL3P58872 VDAC2-214ENST00000543351 1424 ntAPPRIS P1 TSL 5 BASIC8.29□□□□□ -1.08
RHBDL3P58872 COL24A1-201ENST00000370571 6825 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
RHBDL3P58872 SSX7-201ENST00000298181 1311 ntAPPRIS P1 TSL 5 BASIC8.29□□□□□ -1.08
RHBDL3P58872 SRBD1-201ENST00000263736 3681 ntAPPRIS P1 TSL 2 BASIC8.28□□□□□ -1.08
RHBDL3P58872 UNC79-206ENST00000621021 7377 ntAPPRIS P2 TSL 5 BASIC8.28□□□□□ -1.08
RHBDL3P58872 NR1H4-206ENST00000548884 2884 ntAPPRIS P3 TSL 1 (best) BASIC8.28□□□□□ -1.08
RHBDL3P58872 GCNT3-209ENST00000560585 2360 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
RHBDL3P58872 OPALIN-203ENST00000393871 3545 ntTSL 2 BASIC8.28□□□□□ -1.08
RHBDL3P58872 DHX57-203ENST00000457308 4859 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
RHBDL3P58872 CNNM2-202ENST00000369878 15857 ntAPPRIS P4 TSL 1 (best) BASIC8.28□□□□□ -1.08
RHBDL3P58872 DEUP1-209ENST00000531792 1656 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
RHBDL3P58872 MKI67P1-201ENST00000604297 1460 ntBASIC8.28□□□□□ -1.08
RHBDL3P58872 DRP2-202ENST00000395209 7277 ntAPPRIS P3 TSL 1 (best) BASIC8.28□□□□□ -1.08
RHBDL3P58872 B3GALT1-201ENST00000392690 5094 ntAPPRIS P1 BASIC8.28□□□□□ -1.08
RHBDL3P58872 ADGRL3-213ENST00000509896 5069 ntTSL 5 BASIC8.28□□□□□ -1.08
RHBDL3P58872 AC010894.1-201ENST00000313760 361 ntBASIC8.28□□□□□ -1.08
Retrieved 100 of 98,524 protein–RNA pairs in 75.5 ms