Protein–RNA interactions for Protein: P24928

POLR2A, DNA-directed RNA polymerase II subunit RPB1, humanhuman

Known RBP Predictions only

Length 1,970 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2AP24928 CU638689.1-201ENST00000623225 897 ntTSL 3 BASIC7.98□□□□□ -1.13
POLR2AP24928 AC079298.3-203ENST00000623269 555 ntTSL 3 BASIC7.98□□□□□ -1.13
POLR2AP24928 CU634019.4-201ENST00000623347 897 ntTSL 3 BASIC7.98□□□□□ -1.13
POLR2AP24928 SNORA17.5-201ENST00000630429 132 ntBASIC7.98□□□□□ -1.13
POLR2AP24928 AC119674.1-201ENST00000641611 1210 ntBASIC7.98□□□□□ -1.13
POLR2AP24928 CCPG1-202ENST00000425574 1945 ntTSL 2 BASIC7.98□□□□□ -1.13
POLR2AP24928 USF3-201ENST00000316407 13708 ntAPPRIS P2 TSL 5 BASIC7.98□□□□□ -1.13
POLR2AP24928 OR1C1-201ENST00000408896 1307 ntAPPRIS P1 BASIC7.98□□□□□ -1.13
POLR2AP24928 BTN3A2-205ENST00000508906 3733 ntAPPRIS ALT2 TSL 2 BASIC7.97□□□□□ -1.13
POLR2AP24928 MAGEB10-202ENST00000614159 1389 ntAPPRIS P1 BASIC7.97□□□□□ -1.13
POLR2AP24928 WDR31-203ENST00000374195 3101 ntAPPRIS P3 TSL 5 BASIC7.97□□□□□ -1.13
POLR2AP24928 UBE2D3-204ENST00000349311 838 ntAPPRIS ALT1 TSL 2 BASIC7.97□□□□□ -1.13
POLR2AP24928 AL451046.1-201ENST00000406097 534 ntBASIC7.97□□□□□ -1.13
POLR2AP24928 Z68694.1-201ENST00000413929 841 ntBASIC7.97□□□□□ -1.13
POLR2AP24928 BX284668.3-201ENST00000414128 882 ntTSL 5 BASIC7.97□□□□□ -1.13
POLR2AP24928 AL360013.1-201ENST00000419031 858 ntBASIC7.97□□□□□ -1.13
POLR2AP24928 LYPLA1P1-201ENST00000434514 622 ntBASIC7.97□□□□□ -1.13
POLR2AP24928 PPIAP27-201ENST00000453800 265 ntBASIC7.97□□□□□ -1.13
POLR2AP24928 AL358176.1-201ENST00000457477 357 ntTSL 5 BASIC7.97□□□□□ -1.13
POLR2AP24928 GM2AP2-201ENST00000491764 562 ntBASIC7.97□□□□□ -1.13
POLR2AP24928 LINC02114-201ENST00000503757 801 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
POLR2AP24928 ZNF519P4-201ENST00000514008 125 ntBASIC7.97□□□□□ -1.13
POLR2AP24928 NPIPB14P-203ENST00000532298 987 ntBASIC7.97□□□□□ -1.13
POLR2AP24928 AC022509.3-201ENST00000535914 436 ntTSL 3 BASIC7.97□□□□□ -1.13
POLR2AP24928 AC079950.1-201ENST00000551229 568 ntTSL 4 BASIC7.97□□□□□ -1.13
POLR2AP24928 LINC02457-201ENST00000552992 596 ntTSL 4 BASIC7.97□□□□□ -1.13
POLR2AP24928 AC009852.1-201ENST00000564058 465 ntTSL 3 BASIC7.97□□□□□ -1.13
POLR2AP24928 AC139099.3-202ENST00000574856 439 ntTSL 2 BASIC7.97□□□□□ -1.13
POLR2AP24928 AL136097.3-201ENST00000611097 505 ntBASIC7.97□□□□□ -1.13
POLR2AP24928 SMR3B-204ENST00000614072 783 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
POLR2AP24928 AP000720.1-201ENST00000625091 483 ntBASIC7.97□□□□□ -1.13
POLR2AP24928 AC024475.3-203ENST00000634971 854 ntTSL 5 BASIC7.97□□□□□ -1.13
POLR2AP24928 AC125603.4-201ENST00000621942 2699 ntBASIC7.97□□□□□ -1.13
POLR2AP24928 CRB1-210ENST00000538660 3397 ntTSL 2 BASIC7.97□□□□□ -1.13
POLR2AP24928 PTP4A2-218ENST00000602725 3353 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
POLR2AP24928 TMEM230-204ENST00000379277 1536 ntAPPRIS P1 TSL 3 BASIC7.97□□□□□ -1.13
POLR2AP24928 PSG6-201ENST00000187910 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC7.97□□□□□ -1.13
POLR2AP24928 GPR1-AS-201ENST00000623040 3708 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
POLR2AP24928 ZNF234-201ENST00000426739 4551 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
POLR2AP24928 METTL8-201ENST00000375258 8203 ntTSL 5 BASIC7.97□□□□□ -1.13
POLR2AP24928 NUMB-217ENST00000555738 1553 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
POLR2AP24928 LRRC37A-202ENST00000393465 4997 ntAPPRIS ALT2 TSL 5 BASIC7.97□□□□□ -1.13
POLR2AP24928 KIF1B-211ENST00000620295 8624 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
POLR2AP24928 EIF1-203ENST00000469257 2330 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
POLR2AP24928 AC008163.1-201ENST00000636281 1455 ntTSL 5 BASIC7.97□□□□□ -1.13
POLR2AP24928 F5-202ENST00000367797 7024 ntAPPRIS P2 TSL 1 (best) BASIC7.97□□□□□ -1.13
POLR2AP24928 ANKRD20A5P-201ENST00000431648 3556 ntBASIC7.97□□□□□ -1.13
POLR2AP24928 PSMD6-AS2-201ENST00000472046 2456 ntTSL 2 BASIC7.97□□□□□ -1.13
POLR2AP24928 SPARC-201ENST00000231061 3701 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
POLR2AP24928 MSL3-206ENST00000380693 2377 ntTSL 2 BASIC7.97□□□□□ -1.13
POLR2AP24928 RNPC3-208ENST00000533099 3641 ntAPPRIS P2 TSL 5 BASIC7.97□□□□□ -1.13
POLR2AP24928 NR1H4-206ENST00000548884 2884 ntAPPRIS P3 TSL 1 (best) BASIC7.97□□□□□ -1.13
POLR2AP24928 AC123912.3-201ENST00000600907 1367 ntBASIC7.97□□□□□ -1.13
POLR2AP24928 OR1D2-202ENST00000641064 4882 ntAPPRIS P1 BASIC7.97□□□□□ -1.13
POLR2AP24928 AC135012.3-201ENST00000599841 4039 ntTSL 4 BASIC7.97□□□□□ -1.13
POLR2AP24928 HDAC9-201ENST00000401921 3254 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
POLR2AP24928 MET-204ENST00000436117 2295 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
POLR2AP24928 SNORA38B-201ENST00000363524 131 ntBASIC7.97□□□□□ -1.13
POLR2AP24928 S100A1-202ENST00000368696 522 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
POLR2AP24928 FAIM-204ENST00000393035 946 ntAPPRIS P3 TSL 1 (best) BASIC7.97□□□□□ -1.13
POLR2AP24928 AL359694.1-201ENST00000403247 604 ntBASIC7.97□□□□□ -1.13
POLR2AP24928 AL359382.1-201ENST00000417838 426 ntTSL 5 BASIC7.97□□□□□ -1.13
POLR2AP24928 CDY8P-201ENST00000428380 1279 ntBASIC7.97□□□□□ -1.13
POLR2AP24928 AKR1D1-203ENST00000432161 1236 ntTSL 2 BASIC7.97□□□□□ -1.13
POLR2AP24928 RPL23AP19-201ENST00000436229 369 ntBASIC7.97□□□□□ -1.13
POLR2AP24928 AC073109.1-201ENST00000445066 978 ntBASIC7.97□□□□□ -1.13
POLR2AP24928 CDY20P-201ENST00000447528 1279 ntBASIC7.97□□□□□ -1.13
POLR2AP24928 EEF1B2P2-201ENST00000519625 676 ntBASIC7.97□□□□□ -1.13
POLR2AP24928 AC007207.2-201ENST00000543206 542 ntTSL 3 BASIC7.97□□□□□ -1.13
POLR2AP24928 UBE2N-204ENST00000549833 960 ntTSL 3 BASIC7.97□□□□□ -1.13
POLR2AP24928 TRIM37-212ENST00000584889 353 ntTSL 2 BASIC7.97□□□□□ -1.13
POLR2AP24928 AL035587.1-202ENST00000607218 984 ntTSL 3 BASIC7.97□□□□□ -1.13
POLR2AP24928 AL121583.1-201ENST00000612444 682 ntBASIC7.97□□□□□ -1.13
POLR2AP24928 AL390882.1-201ENST00000618821 594 ntBASIC7.97□□□□□ -1.13
POLR2AP24928 AL031665.2-201ENST00000620712 209 ntTSL 3 BASIC7.97□□□□□ -1.13
POLR2AP24928 DRG1-207ENST00000629688 309 ntTSL 5 BASIC7.97□□□□□ -1.13
POLR2AP24928 MOCS2-201ENST00000361377 3568 ntTSL 4 BASIC7.97□□□□□ -1.13
POLR2AP24928 ABI1-202ENST00000359188 3492 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
POLR2AP24928 ABCC5-205ENST00000427120 4697 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
POLR2AP24928 CLASP1-202ENST00000397587 7915 ntTSL 5 BASIC7.97□□□□□ -1.13
POLR2AP24928 TBC1D5-219ENST00000446818 3124 ntTSL 1 (best) BASIC7.96□□□□□ -1.13
POLR2AP24928 OR7A10-202ENST00000641129 1847 ntAPPRIS P1 BASIC7.96□□□□□ -1.13
POLR2AP24928 KBTBD11-OT1-204ENST00000635855 6169 ntAPPRIS P5 TSL 5 BASIC7.96□□□□□ -1.13
POLR2AP24928 ZNF667-206ENST00000591790 5250 ntTSL 2 BASIC7.96□□□□□ -1.13
POLR2AP24928 INTS4-209ENST00000534064 3156 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.13
POLR2AP24928 PLEKHG4B-204ENST00000637938 12612 ntAPPRIS ALT2 TSL 5 BASIC7.96□□□□□ -1.13
POLR2AP24928 KAT14-201ENST00000377681 3483 ntAPPRIS ALT1 TSL 5 BASIC7.96□□□□□ -1.13
POLR2AP24928 VSIG1-201ENST00000217957 2997 ntAPPRIS P3 TSL 1 (best) BASIC7.96□□□□□ -1.13
POLR2AP24928 GPR89A-213ENST00000534502 1644 ntTSL 2 BASIC7.96□□□□□ -1.13
POLR2AP24928 AL031594.1-201ENST00000417123 1932 ntTSL 2 BASIC7.96□□□□□ -1.13
POLR2AP24928 SORBS1-211ENST00000371247 7354 ntAPPRIS ALT2 TSL 5 BASIC7.96□□□□□ -1.14
POLR2AP24928 FRMPD2-213ENST00000636244 4194 ntAPPRIS ALT2 TSL 5 BASIC7.96□□□□□ -1.14
POLR2AP24928 SLC8A1-201ENST00000332839 2922 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.14
POLR2AP24928 CBFA2T2-209ENST00000492345 7803 ntTSL 5 BASIC7.96□□□□□ -1.14
POLR2AP24928 TMPRSS11D-201ENST00000283916 2817 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.14
POLR2AP24928 C3orf49-201ENST00000295896 1292 ntAPPRIS P5 TSL 2 BASIC7.96□□□□□ -1.14
POLR2AP24928 RNA5SP321-201ENST00000362722 111 ntBASIC7.96□□□□□ -1.14
POLR2AP24928 FAM183A-205ENST00000410048 500 ntTSL 3 BASIC7.96□□□□□ -1.14
POLR2AP24928 LINC01811-201ENST00000415991 594 ntTSL 5 BASIC7.96□□□□□ -1.14
POLR2AP24928 AL121578.1-201ENST00000428051 892 ntBASIC7.96□□□□□ -1.14
Retrieved 100 of 98,524 protein–RNA pairs in 114 ms