Protein–RNA interactions for Protein: P02649

APOE, Apolipoprotein E, humanhuman

Predictions only

Length 317 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOEP02649 MED1-201ENST00000300651 5844 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
APOEP02649 SLC2A14-201ENST00000340749 3699 ntAPPRIS ALT2 TSL 2 BASIC7.36□□□□□ -1.23
APOEP02649 ASCC1-203ENST00000342444 2270 ntTSL 2 BASIC7.36□□□□□ -1.23
APOEP02649 CS-201ENST00000351328 2975 ntAPPRIS P2 TSL 1 (best) BASIC7.36□□□□□ -1.23
APOEP02649 UIMC1-207ENST00000506128 1945 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
APOEP02649 AC015871.3-201ENST00000618835 2261 ntBASIC7.36□□□□□ -1.23
APOEP02649 IRF6-201ENST00000367021 4306 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
APOEP02649 RAB2B-201ENST00000397762 2928 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
APOEP02649 OSBPL1A-202ENST00000357041 1869 ntTSL 2 BASIC7.36□□□□□ -1.23
APOEP02649 DYDC2-201ENST00000256039 1842 ntAPPRIS P3 TSL 2 BASIC7.36□□□□□ -1.23
APOEP02649 ARF4-209ENST00000496292 1467 ntTSL 5 BASIC7.36□□□□□ -1.23
APOEP02649 ABCA11P-202ENST00000504019 2110 ntBASIC7.36□□□□□ -1.23
APOEP02649 SUN3-203ENST00000412142 1448 ntTSL 5 BASIC7.35□□□□□ -1.23
APOEP02649 KIF1B-204ENST00000377086 10669 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
APOEP02649 AC090774.4-201ENST00000578888 1372 ntBASIC7.35□□□□□ -1.23
APOEP02649 SYTL5-201ENST00000297875 4722 ntTSL 5 BASIC7.35□□□□□ -1.23
APOEP02649 PPP3R2-201ENST00000374806 3387 ntAPPRIS P1 BASIC7.35□□□□□ -1.23
APOEP02649 AQP4-AS1-202ENST00000578701 2177 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
APOEP02649 GJC1-207ENST00000590758 7566 ntAPPRIS P1 TSL 3 BASIC7.35□□□□□ -1.23
APOEP02649 MIR431-201ENST00000385266 114 ntBASIC7.35□□□□□ -1.23
APOEP02649 AL773545.3-201ENST00000414297 706 ntBASIC7.35□□□□□ -1.23
APOEP02649 CCR8-202ENST00000414803 1078 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
APOEP02649 GAPDHP69-201ENST00000425504 1008 ntBASIC7.35□□□□□ -1.23
APOEP02649 OSTN-AS1-201ENST00000430375 515 ntTSL 5 BASIC7.35□□□□□ -1.23
APOEP02649 GAS5-211ENST00000432536 959 ntTSL 2 BASIC7.35□□□□□ -1.23
APOEP02649 AL035691.1-201ENST00000434562 595 ntTSL 3 BASIC7.35□□□□□ -1.23
APOEP02649 AL592114.2-201ENST00000440142 532 ntBASIC7.35□□□□□ -1.23
APOEP02649 CFLAR-212ENST00000440180 1198 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
APOEP02649 RPL7L1P7-201ENST00000509986 724 ntBASIC7.35□□□□□ -1.23
APOEP02649 SCARNA6-201ENST00000515982 265 ntBASIC7.35□□□□□ -1.23
APOEP02649 AC113423.2-201ENST00000517582 545 ntTSL 2 BASIC7.35□□□□□ -1.23
APOEP02649 OXR1-212ENST00000521592 993 ntTSL 5 BASIC7.35□□□□□ -1.23
APOEP02649 IGHVIII-25-1-201ENST00000522143 241 ntBASIC7.35□□□□□ -1.23
APOEP02649 ETFBKMT-204ENST00000538391 1067 ntTSL 3 BASIC7.35□□□□□ -1.23
APOEP02649 AC096708.2-201ENST00000577676 512 ntBASIC7.35□□□□□ -1.23
APOEP02649 AC005899.3-201ENST00000580360 271 ntTSL 3 BASIC7.35□□□□□ -1.23
APOEP02649 AC011476.3-203ENST00000586961 346 ntTSL 5 BASIC7.35□□□□□ -1.23
APOEP02649 AC010463.3-201ENST00000594077 500 ntBASIC7.35□□□□□ -1.23
APOEP02649 ZNF415-218ENST00000599261 601 ntTSL 3 BASIC7.35□□□□□ -1.23
APOEP02649 ACTG1P22-201ENST00000603793 1099 ntBASIC7.35□□□□□ -1.23
APOEP02649 AP005328.2-201ENST00000606879 657 ntTSL 3 BASIC7.35□□□□□ -1.23
APOEP02649 AC063962.1-201ENST00000608199 521 ntBASIC7.35□□□□□ -1.23
APOEP02649 AP003108.4-201ENST00000623917 878 ntBASIC7.35□□□□□ -1.23
APOEP02649 AC087565.2-201ENST00000637695 952 ntTSL 5 BASIC7.35□□□□□ -1.23
APOEP02649 AC183089.2-201ENST00000637931 916 ntBASIC7.35□□□□□ -1.23
APOEP02649 LINC01772-201ENST00000457898 3245 ntTSL 2 BASIC7.35□□□□□ -1.23
APOEP02649 UBR4-204ENST00000375254 15906 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
APOEP02649 TAT-201ENST00000355962 3983 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
APOEP02649 OR4F17-203ENST00000618231 2586 ntAPPRIS P1 BASIC7.35□□□□□ -1.23
APOEP02649 CYLD-203ENST00000427738 8503 ntTSL 5 BASIC7.35□□□□□ -1.23
APOEP02649 HTR1D-201ENST00000374619 2835 ntAPPRIS P1 BASIC7.35□□□□□ -1.23
APOEP02649 NPHP1-203ENST00000393272 2752 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
APOEP02649 ZRANB3-210ENST00000536680 6943 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
APOEP02649 LARP1B-203ENST00000432347 2707 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
APOEP02649 PGK2-201ENST00000304801 1657 ntAPPRIS P1 BASIC7.35□□□□□ -1.23
APOEP02649 RDH11-203ENST00000553384 1926 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
APOEP02649 ARHGEF3-214ENST00000497267 2197 ntTSL 2 BASIC7.35□□□□□ -1.23
APOEP02649 CLEC7A-205ENST00000353231 2446 ntAPPRIS P3 TSL 1 (best) BASIC7.35□□□□□ -1.23
APOEP02649 ZNF532-224ENST00000591808 5171 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
APOEP02649 AC092725.2-201ENST00000567658 1389 ntBASIC7.34□□□□□ -1.23
APOEP02649 CDC7-203ENST00000428239 3313 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
APOEP02649 TIMM21-201ENST00000169551 3095 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
APOEP02649 GALNT11-201ENST00000415421 2555 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
APOEP02649 AC132219.2-201ENST00000624416 2327 ntBASIC7.34□□□□□ -1.23
APOEP02649 USP1-202ENST00000371146 3507 ntAPPRIS P1 TSL 5 BASIC7.34□□□□□ -1.23
APOEP02649 PCDH11Y-204ENST00000400457 9039 ntAPPRIS P5 TSL 1 (best) BASIC7.34□□□□□ -1.23
APOEP02649 OR11G2-203ENST00000641879 4415 ntAPPRIS P1 BASIC7.34□□□□□ -1.23
APOEP02649 POT1-AS1-204ENST00000449642 3238 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
APOEP02649 CTPS1-201ENST00000372616 2037 ntAPPRIS P1 TSL 2 BASIC7.34□□□□□ -1.23
APOEP02649 DCAF13-210ENST00000618975 2038 ntTSL 2 BASIC7.34□□□□□ -1.23
APOEP02649 LRRTM4-205ENST00000409911 2976 ntAPPRIS ALT1 TSL 5 BASIC7.34□□□□□ -1.23
APOEP02649 AC007091.1-201ENST00000412563 566 ntTSL 5 BASIC7.34□□□□□ -1.23
APOEP02649 VN1R66P-201ENST00000412929 916 ntBASIC7.34□□□□□ -1.23
APOEP02649 PGM5-AS1-202ENST00000420855 572 ntTSL 3 BASIC7.34□□□□□ -1.23
APOEP02649 CYP4F32P-201ENST00000426492 504 ntBASIC7.34□□□□□ -1.23
APOEP02649 AL139042.1-201ENST00000429137 305 ntTSL 3 BASIC7.34□□□□□ -1.23
APOEP02649 MIR181A1HG-202ENST00000432296 930 ntTSL 3 BASIC7.34□□□□□ -1.23
APOEP02649 AC019211.1-201ENST00000432993 754 ntTSL 3 BASIC7.34□□□□□ -1.23
APOEP02649 SEPT7P2-208ENST00000444755 505 ntTSL 3 BASIC7.34□□□□□ -1.23
APOEP02649 AGKP1-201ENST00000455254 1263 ntBASIC7.34□□□□□ -1.23
APOEP02649 SEC11A-202ENST00000455959 1223 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
APOEP02649 AL135933.1-201ENST00000498657 802 ntBASIC7.34□□□□□ -1.23
APOEP02649 RN7SKP233-201ENST00000517005 110 ntBASIC7.34□□□□□ -1.23
APOEP02649 IGHVII-51-2-201ENST00000519778 259 ntBASIC7.34□□□□□ -1.23
APOEP02649 LINC00964-204ENST00000528090 572 ntTSL 4 BASIC7.34□□□□□ -1.23
APOEP02649 AC073896.2-202ENST00000549860 437 ntTSL 2 BASIC7.34□□□□□ -1.23
APOEP02649 SEC11A-209ENST00000560266 1089 ntTSL 5 BASIC7.34□□□□□ -1.23
APOEP02649 AC090181.1-201ENST00000560446 264 ntTSL 3 BASIC7.34□□□□□ -1.23
APOEP02649 AC026458.1-201ENST00000564330 438 ntBASIC7.34□□□□□ -1.23
APOEP02649 FCGR1CP-201ENST00000579737 1127 ntBASIC7.34□□□□□ -1.23
APOEP02649 ZNF677-211ENST00000601828 719 ntTSL 2 BASIC7.34□□□□□ -1.23
APOEP02649 AL050403.2-202ENST00000603462 492 ntTSL 5 BASIC7.34□□□□□ -1.23
APOEP02649 MIR8082-201ENST00000612488 81 ntBASIC7.34□□□□□ -1.23
APOEP02649 Metazoa_SRP.195-201ENST00000612667 287 ntBASIC7.34□□□□□ -1.23
APOEP02649 RN7SL126P-201ENST00000616400 299 ntBASIC7.34□□□□□ -1.23
APOEP02649 AC127071.1-201ENST00000624997 712 ntBASIC7.34□□□□□ -1.23
APOEP02649 LINC00466-206ENST00000634576 1279 ntTSL 5 BASIC7.34□□□□□ -1.23
APOEP02649 MIR665-201ENST00000635949 72 ntBASIC7.34□□□□□ -1.23
APOEP02649 ESRRG-201ENST00000359162 5197 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
APOEP02649 AQR-201ENST00000156471 9694 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
Retrieved 100 of 98,524 protein–RNA pairs in 95.7 ms