Protein–RNA interactions for Protein: O60224

SSX4, Protein SSX4, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX4O60224 AP000722.1-201ENST00000531176 775 ntTSL 3 BASIC6.44□□□□□ -1.38
SSX4O60224 AP002833.2-201ENST00000531585 462 ntTSL 3 BASIC6.44□□□□□ -1.38
SSX4O60224 FXYD2-206ENST00000532119 562 ntAPPRIS P1 TSL 3 BASIC6.44□□□□□ -1.38
SSX4O60224 AC022075.2-201ENST00000535911 562 ntTSL 4 BASIC6.44□□□□□ -1.38
SSX4O60224 KLRD1-209ENST00000543420 802 ntTSL 5 BASIC6.44□□□□□ -1.38
SSX4O60224 AC010333.1-201ENST00000563116 563 ntTSL 4 BASIC6.44□□□□□ -1.38
SSX4O60224 LINC01989-201ENST00000566930 1081 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
SSX4O60224 AC005736.2-201ENST00000571302 774 ntTSL 2 BASIC6.44□□□□□ -1.38
SSX4O60224 AC087392.1-201ENST00000576252 820 ntTSL 2 BASIC6.44□□□□□ -1.38
SSX4O60224 MIR1273F-201ENST00000580581 99 ntBASIC6.44□□□□□ -1.38
SSX4O60224 RPS4XP16-202ENST00000595905 807 ntTSL 5 BASIC6.44□□□□□ -1.38
SSX4O60224 AL078624.2-201ENST00000605063 554 ntBASIC6.44□□□□□ -1.38
SSX4O60224 AC233702.2-201ENST00000618784 583 ntTSL 4 BASIC6.44□□□□□ -1.38
SSX4O60224 Metazoa_SRP.96-201ENST00000621315 318 ntBASIC6.44□□□□□ -1.38
SSX4O60224 LINC00595-211ENST00000634735 535 ntTSL 3 BASIC6.44□□□□□ -1.38
SSX4O60224 OR5M2P-202ENST00000641241 4242 ntBASIC6.44□□□□□ -1.38
SSX4O60224 DPYD-202ENST00000370192 4412 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
SSX4O60224 LAMA2-201ENST00000421865 9640 ntAPPRIS P2 TSL 5 BASIC6.44□□□□□ -1.38
SSX4O60224 GABRR3-203ENST00000621172 1521 ntAPPRIS P1 TSL 5 BASIC6.44□□□□□ -1.38
SSX4O60224 HERC4-211ENST00000492996 3385 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
SSX4O60224 AC022034.1-201ENST00000512867 2156 ntBASIC6.44□□□□□ -1.38
SSX4O60224 PYROXD1-205ENST00000538582 3639 ntTSL 2 BASIC6.44□□□□□ -1.38
SSX4O60224 POF1B-202ENST00000373145 1972 ntAPPRIS ALT2 TSL 1 (best) BASIC6.44□□□□□ -1.38
SSX4O60224 AC113146.2-201ENST00000560743 1961 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
SSX4O60224 AP005131.1-201ENST00000585366 4745 ntTSL 5 BASIC6.44□□□□□ -1.38
SSX4O60224 OR51E2-203ENST00000641638 2626 ntAPPRIS P1 BASIC6.44□□□□□ -1.38
SSX4O60224 NHS-202ENST00000398097 8213 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
SSX4O60224 CDY7P-201ENST00000429883 1604 ntBASIC6.43□□□□□ -1.38
SSX4O60224 CEACAM6-201ENST00000199764 2700 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
SSX4O60224 SLC14A1-221ENST00000619403 3823 ntTSL 5 BASIC6.43□□□□□ -1.38
SSX4O60224 AC015969.1-201ENST00000366218 1416 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
SSX4O60224 TRIM60P14-201ENST00000513444 1419 ntBASIC6.43□□□□□ -1.38
SSX4O60224 LINC02324-201ENST00000531609 1442 ntTSL 2 BASIC6.43□□□□□ -1.38
SSX4O60224 SLC4A4-204ENST00000425175 7596 ntTSL 5 BASIC6.43□□□□□ -1.38
SSX4O60224 AP2B1-211ENST00000610402 3204 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
SSX4O60224 HIPK1-211ENST00000626993 8016 ntTSL 5 BASIC6.43□□□□□ -1.38
SSX4O60224 NEMF-201ENST00000298310 6234 ntAPPRIS P1 TSL 5 BASIC6.43□□□□□ -1.38
SSX4O60224 WASF5P-205ENST00000428639 1455 ntBASIC6.43□□□□□ -1.38
SSX4O60224 ZNF790-206ENST00000613249 2183 ntAPPRIS P1 TSL 4 BASIC6.43□□□□□ -1.38
SSX4O60224 SORBS1-207ENST00000371239 2436 ntAPPRIS ALT2 TSL 5 BASIC6.43□□□□□ -1.38
SSX4O60224 RNU1-122P-201ENST00000365538 156 ntBASIC6.43□□□□□ -1.38
SSX4O60224 MIR199B-201ENST00000384849 110 ntBASIC6.43□□□□□ -1.38
SSX4O60224 RBBP4P4-201ENST00000398588 1289 ntBASIC6.43□□□□□ -1.38
SSX4O60224 SUMO2P13-201ENST00000403109 272 ntBASIC6.43□□□□□ -1.38
SSX4O60224 TYMSP1-201ENST00000407851 869 ntBASIC6.43□□□□□ -1.38
SSX4O60224 AC244033.1-201ENST00000426826 870 ntBASIC6.43□□□□□ -1.38
SSX4O60224 SDHC-204ENST00000432287 460 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
SSX4O60224 AP000534.1-201ENST00000444162 1294 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
SSX4O60224 GTF2F2P2-201ENST00000445825 721 ntBASIC6.43□□□□□ -1.38
SSX4O60224 AGKP1-201ENST00000455254 1263 ntBASIC6.43□□□□□ -1.38
SSX4O60224 OR7E62P-201ENST00000456741 477 ntBASIC6.43□□□□□ -1.38
SSX4O60224 TREML3P-201ENST00000457327 501 ntBASIC6.43□□□□□ -1.38
SSX4O60224 RPL7AP30-201ENST00000482859 796 ntBASIC6.43□□□□□ -1.38
SSX4O60224 MTND6P8-201ENST00000503471 522 ntBASIC6.43□□□□□ -1.38
SSX4O60224 AC095059.2-201ENST00000510601 933 ntBASIC6.43□□□□□ -1.38
SSX4O60224 ETFBKMT-204ENST00000538391 1067 ntTSL 3 BASIC6.43□□□□□ -1.38
SSX4O60224 AC068631.3-201ENST00000538831 225 ntBASIC6.43□□□□□ -1.38
SSX4O60224 LRTOMT-217ENST00000539587 428 ntTSL 2 BASIC6.43□□□□□ -1.38
SSX4O60224 NDFIP1P1-201ENST00000543144 525 ntBASIC6.43□□□□□ -1.38
SSX4O60224 AC079313.2-201ENST00000550474 564 ntTSL 4 BASIC6.43□□□□□ -1.38
SSX4O60224 SRSF5-209ENST00000555349 565 ntTSL 4 BASIC6.43□□□□□ -1.38
SSX4O60224 SEC11A-209ENST00000560266 1089 ntTSL 5 BASIC6.43□□□□□ -1.38
SSX4O60224 AL137802.2-201ENST00000562878 1110 ntBASIC6.43□□□□□ -1.38
SSX4O60224 LINC02180-201ENST00000566439 1010 ntTSL 3 BASIC6.43□□□□□ -1.38
SSX4O60224 AC114488.3-201ENST00000581333 480 ntTSL 4 BASIC6.43□□□□□ -1.38
SSX4O60224 AC012370.2-202ENST00000600508 1099 ntTSL 5 BASIC6.43□□□□□ -1.38
SSX4O60224 LAMTOR5-207ENST00000602858 553 ntTSL 2 BASIC6.43□□□□□ -1.38
SSX4O60224 AC004852.1-201ENST00000605206 154 ntBASIC6.43□□□□□ -1.38
SSX4O60224 AC079791.1-201ENST00000605356 973 ntBASIC6.43□□□□□ -1.38
SSX4O60224 AP005329.3-201ENST00000609924 686 ntBASIC6.43□□□□□ -1.38
SSX4O60224 AL109924.4-201ENST00000623089 670 ntBASIC6.43□□□□□ -1.38
SSX4O60224 MIR7515HG-257ENST00000625915 852 ntTSL 5 BASIC6.43□□□□□ -1.38
SSX4O60224 OR13D1-202ENST00000641530 945 ntAPPRIS P1 BASIC6.43□□□□□ -1.38
SSX4O60224 MSH6-209ENST00000538136 4055 ntTSL 2 BASIC6.43□□□□□ -1.38
SSX4O60224 OAS2-201ENST00000342315 3613 ntAPPRIS P3 TSL 1 (best) BASIC6.43□□□□□ -1.38
SSX4O60224 AP003175.1-201ENST00000641383 6658 ntBASIC6.43□□□□□ -1.38
SSX4O60224 AC010329.1-201ENST00000593903 8328 ntBASIC6.43□□□□□ -1.38
SSX4O60224 TGFBR3-202ENST00000370399 4550 ntAPPRIS ALT1 TSL 1 (best) BASIC6.43□□□□□ -1.38
SSX4O60224 PCBP1-AS1-210ENST00000416395 2451 ntTSL 2 BASIC6.43□□□□□ -1.38
SSX4O60224 SORCS1-210ENST00000622431 6701 ntTSL 5 BASIC6.43□□□□□ -1.38
SSX4O60224 TIMM21-201ENST00000169551 3095 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
SSX4O60224 NCALD-203ENST00000395923 3808 ntAPPRIS P1 TSL 5 BASIC6.43□□□□□ -1.38
SSX4O60224 CBWD6-203ENST00000456520 1608 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
SSX4O60224 OR4K13-202ENST00000641664 5980 ntAPPRIS P1 BASIC6.43□□□□□ -1.38
SSX4O60224 TIAL1-205ENST00000436547 1401 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
SSX4O60224 FGD6-205ENST00000549499 3757 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
SSX4O60224 MUC5B-204ENST00000529681 17911 ntAPPRIS P1 TSL 5 BASIC6.42□□□□□ -1.38
SSX4O60224 BCL2L14-201ENST00000266434 2039 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
SSX4O60224 NACA-203ENST00000454682 6629 ntTSL 5 BASIC6.42□□□□□ -1.38
SSX4O60224 CACNB4-225ENST00000636442 4232 ntTSL 5 BASIC6.42□□□□□ -1.38
SSX4O60224 PIGN-238ENST00000639758 4239 ntTSL 5 BASIC6.42□□□□□ -1.38
SSX4O60224 AC099654.3-201ENST00000447087 1546 ntBASIC6.42□□□□□ -1.38
SSX4O60224 AL591848.4-201ENST00000567832 3472 ntBASIC6.42□□□□□ -1.38
SSX4O60224 RNA5SP396-201ENST00000364834 120 ntBASIC6.42□□□□□ -1.38
SSX4O60224 NR1I3-203ENST00000367981 1076 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
SSX4O60224 MAML3-201ENST00000398940 831 ntTSL 5 BASIC6.42□□□□□ -1.38
SSX4O60224 RPL5P28-201ENST00000418634 693 ntBASIC6.42□□□□□ -1.38
SSX4O60224 AF274573.1-201ENST00000430535 494 ntBASIC6.42□□□□□ -1.38
SSX4O60224 TPTE2P1-204ENST00000435256 593 ntBASIC6.42□□□□□ -1.38
SSX4O60224 AF196972.1-201ENST00000445586 653 ntTSL 3 BASIC6.42□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 124.2 ms