Protein–RNA interactions for Protein: P58872

RHBDL3, Rhomboid-related protein 3, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDL3P58872 FAM49B-229ENST00000615041 750 ntTSL 5 BASIC8.32□□□□□ -1.08
RHBDL3P58872 OR1N2-202ENST00000616791 993 ntAPPRIS P2 BASIC8.32□□□□□ -1.08
RHBDL3P58872 AC130456.6-201ENST00000623745 765 ntBASIC8.32□□□□□ -1.08
RHBDL3P58872 LINC02536-201ENST00000625799 625 ntTSL 3 BASIC8.32□□□□□ -1.08
RHBDL3P58872 VIPR1-AS1-221ENST00000626992 602 ntTSL 5 BASIC8.32□□□□□ -1.08
RHBDL3P58872 SCRN1-210ENST00000631335 423 ntTSL 5 BASIC8.32□□□□□ -1.08
RHBDL3P58872 AC007012.2-201ENST00000623206 1676 ntBASIC8.32□□□□□ -1.08
RHBDL3P58872 ZNF761-202ENST00000432094 4061 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
RHBDL3P58872 GABRA2-215ENST00000540012 2588 ntTSL 5 BASIC8.32□□□□□ -1.08
RHBDL3P58872 AL590065.1-201ENST00000603371 4774 ntBASIC8.32□□□□□ -1.08
RHBDL3P58872 RPGRIP1L-202ENST00000379925 5297 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
RHBDL3P58872 DDX46-201ENST00000354283 3821 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
RHBDL3P58872 TRAPPC11-209ENST00000512476 2546 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
RHBDL3P58872 CLUL1-201ENST00000338387 1897 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
RHBDL3P58872 MUC21-201ENST00000376296 3651 ntAPPRIS P2 TSL 1 (best) BASIC8.32□□□□□ -1.08
RHBDL3P58872 UGT2B4-201ENST00000305107 2103 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
RHBDL3P58872 FKBP5-202ENST00000536438 3940 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
RHBDL3P58872 MAP4K4-201ENST00000302217 6624 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
RHBDL3P58872 NAPEPLD-209ENST00000465647 2380 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
RHBDL3P58872 SYCP1-202ENST00000369522 3522 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
RHBDL3P58872 NCKAP1L-201ENST00000293373 9016 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
RHBDL3P58872 PAIP1-202ENST00000338972 1814 ntAPPRIS P3 TSL 5 BASIC8.31□□□□□ -1.08
RHBDL3P58872 PNN-201ENST00000216832 3576 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
RHBDL3P58872 KAT6B-205ENST00000372725 6944 ntAPPRIS ALT2 TSL 5 BASIC8.31□□□□□ -1.08
RHBDL3P58872 BRD8-201ENST00000230901 3198 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
RHBDL3P58872 AL031594.1-201ENST00000417123 1932 ntTSL 2 BASIC8.31□□□□□ -1.08
RHBDL3P58872 LCP1-201ENST00000323076 3787 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
RHBDL3P58872 MAPK10-270ENST00000641102 3538 ntBASIC8.31□□□□□ -1.08
RHBDL3P58872 AL139352.1-201ENST00000255183 1001 ntTSL 2 BASIC8.31□□□□□ -1.08
RHBDL3P58872 AC022826.2-201ENST00000358757 776 ntAPPRIS P1 TSL 4 BASIC8.31□□□□□ -1.08
RHBDL3P58872 AC000089.1-201ENST00000424559 801 ntBASIC8.31□□□□□ -1.08
RHBDL3P58872 LRTOMT-209ENST00000440313 253 ntTSL 3 BASIC8.31□□□□□ -1.08
RHBDL3P58872 AC099677.4-201ENST00000446786 380 ntTSL 3 BASIC8.31□□□□□ -1.08
RHBDL3P58872 DPP10-AS1-202ENST00000448663 644 ntTSL 3 BASIC8.31□□□□□ -1.08
RHBDL3P58872 AC016822.1-201ENST00000457975 439 ntTSL 3 BASIC8.31□□□□□ -1.08
RHBDL3P58872 RN7SKP198-201ENST00000459286 306 ntBASIC8.31□□□□□ -1.08
RHBDL3P58872 RN7SL502P-201ENST00000481857 290 ntBASIC8.31□□□□□ -1.08
RHBDL3P58872 AC096743.1-201ENST00000485172 319 ntBASIC8.31□□□□□ -1.08
RHBDL3P58872 MTERF4-220ENST00000495694 909 ntTSL 5 BASIC8.31□□□□□ -1.08
RHBDL3P58872 AC010834.1-201ENST00000517998 696 ntTSL 2 BASIC8.31□□□□□ -1.08
RHBDL3P58872 BAALC-AS1-208ENST00000523614 582 ntTSL 5 BASIC8.31□□□□□ -1.08
RHBDL3P58872 TMEM126B-211ENST00000534341 1273 ntTSL 2 BASIC8.31□□□□□ -1.08
RHBDL3P58872 AC156455.1-201ENST00000538790 851 ntTSL 2 BASIC8.31□□□□□ -1.08
RHBDL3P58872 LINC02392-202ENST00000549313 574 ntTSL 4 BASIC8.31□□□□□ -1.08
RHBDL3P58872 AL133163.3-201ENST00000556448 504 ntTSL 5 BASIC8.31□□□□□ -1.08
RHBDL3P58872 AC026462.3-201ENST00000565153 557 ntTSL 2 BASIC8.31□□□□□ -1.08
RHBDL3P58872 MIR3135A-201ENST00000578460 77 ntBASIC8.31□□□□□ -1.08
RHBDL3P58872 AC138207.8-204ENST00000579588 527 ntBASIC8.31□□□□□ -1.08
RHBDL3P58872 AC036176.3-201ENST00000602456 418 ntBASIC8.31□□□□□ -1.08
RHBDL3P58872 5S_rRNA.23-201ENST00000612086 102 ntBASIC8.31□□□□□ -1.08
RHBDL3P58872 Metazoa_SRP.77-201ENST00000616915 252 ntBASIC8.31□□□□□ -1.08
RHBDL3P58872 PPP3CB-AS1-215ENST00000620559 656 ntTSL 5 BASIC8.31□□□□□ -1.08
RHBDL3P58872 AC005858.3-201ENST00000624756 589 ntBASIC8.31□□□□□ -1.08
RHBDL3P58872 BCL2L14-203ENST00000308721 1897 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
RHBDL3P58872 MEIOB-205ENST00000470044 1857 ntTSL 2 BASIC8.31□□□□□ -1.08
RHBDL3P58872 MKL2-209ENST00000574045 3309 ntAPPRIS P3 TSL 1 (best) BASIC8.31□□□□□ -1.08
RHBDL3P58872 AMD1-203ENST00000368882 3059 ntTSL 2 BASIC8.31□□□□□ -1.08
RHBDL3P58872 CDY7P-201ENST00000429883 1604 ntBASIC8.31□□□□□ -1.08
RHBDL3P58872 LRRC8B-203ENST00000439853 7474 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
RHBDL3P58872 DCAF5-205ENST00000554215 4803 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
RHBDL3P58872 CACHD1-201ENST00000290039 5275 ntAPPRIS P1 TSL 5 BASIC8.31□□□□□ -1.08
RHBDL3P58872 MSH6-209ENST00000538136 4055 ntTSL 2 BASIC8.31□□□□□ -1.08
RHBDL3P58872 HIPK1-201ENST00000340480 6997 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
RHBDL3P58872 CD163-209ENST00000541972 3590 ntAPPRIS ALT2 TSL 5 BASIC8.31□□□□□ -1.08
RHBDL3P58872 HIPK1-211ENST00000626993 8016 ntTSL 5 BASIC8.31□□□□□ -1.08
RHBDL3P58872 C8orf34-208ENST00000523686 1948 ntAPPRIS ALT2 TSL 2 BASIC8.31□□□□□ -1.08
RHBDL3P58872 EFTUD2-220ENST00000591382 3675 ntAPPRIS P1 TSL 2 BASIC8.31□□□□□ -1.08
RHBDL3P58872 GRIA3-204ENST00000541091 2740 ntAPPRIS P5 TSL 1 (best) BASIC8.31□□□□□ -1.08
RHBDL3P58872 FHL5-201ENST00000326771 2031 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
RHBDL3P58872 AC129502.1-201ENST00000623261 1654 ntBASIC8.3□□□□□ -1.08
RHBDL3P58872 INTS7-203ENST00000366994 4417 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
RHBDL3P58872 C11orf54-207ENST00000528288 4094 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
RHBDL3P58872 LINC01697-202ENST00000426534 1764 ntTSL 2 BASIC8.3□□□□□ -1.08
RHBDL3P58872 LZIC-203ENST00000400903 1405 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
RHBDL3P58872 FANCD2P2-201ENST00000437591 1400 ntBASIC8.3□□□□□ -1.08
RHBDL3P58872 PTPRG-AS1-204ENST00000474795 2661 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
RHBDL3P58872 LRRC37A4P-201ENST00000579913 3243 ntTSL 2 BASIC8.3□□□□□ -1.08
RHBDL3P58872 LINC01252-201ENST00000499291 3673 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
RHBDL3P58872 PLEKHA5-216ENST00000540972 1954 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
RHBDL3P58872 CACNB4-225ENST00000636442 4232 ntTSL 5 BASIC8.3□□□□□ -1.08
RHBDL3P58872 NT5DC1-201ENST00000319550 6923 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
RHBDL3P58872 ALG13-201ENST00000251943 3997 ntTSL 2 BASIC8.3□□□□□ -1.08
RHBDL3P58872 RIF1-205ENST00000444746 7897 ntAPPRIS P3 TSL 1 (best) BASIC8.3□□□□□ -1.08
RHBDL3P58872 CCDC129-205ENST00000451887 3611 ntAPPRIS ALT2 TSL 2 BASIC8.3□□□□□ -1.08
RHBDL3P58872 SNTN-203ENST00000496807 3746 ntTSL 4 BASIC8.3□□□□□ -1.08
RHBDL3P58872 RNU1-5P-201ENST00000362684 144 ntBASIC8.3□□□□□ -1.08
RHBDL3P58872 RNA5SP172-201ENST00000365061 118 ntBASIC8.3□□□□□ -1.08
RHBDL3P58872 FABP3-201ENST00000373713 725 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
RHBDL3P58872 SNORD94-201ENST00000386037 137 ntBASIC8.3□□□□□ -1.08
RHBDL3P58872 TRAV13-1-201ENST00000390436 360 ntAPPRIS P1 BASIC8.3□□□□□ -1.08
RHBDL3P58872 RPL31-202ENST00000409000 641 ntTSL 2 BASIC8.3□□□□□ -1.08
RHBDL3P58872 VWC2L-IT1-201ENST00000416430 467 ntTSL 3 BASIC8.3□□□□□ -1.08
RHBDL3P58872 AC004870.2-202ENST00000423781 706 ntTSL 3 BASIC8.3□□□□□ -1.08
RHBDL3P58872 TRGV7-201ENST00000427089 353 ntBASIC8.3□□□□□ -1.08
RHBDL3P58872 MAGEC3-203ENST00000443323 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC8.3□□□□□ -1.08
RHBDL3P58872 AC084033.1-201ENST00000550830 633 ntBASIC8.3□□□□□ -1.08
RHBDL3P58872 AC130650.1-201ENST00000570581 415 ntTSL 2 BASIC8.3□□□□□ -1.08
RHBDL3P58872 MRPS21P9-201ENST00000571150 257 ntBASIC8.3□□□□□ -1.08
RHBDL3P58872 AC139099.1-201ENST00000573737 976 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
RHBDL3P58872 AC005899.3-201ENST00000580360 271 ntTSL 3 BASIC8.3□□□□□ -1.08
Retrieved 100 of 98,524 protein–RNA pairs in 161.4 ms