Protein–RNA interactions for Protein: P17096

HMGA1, High mobility group protein HMG-I/HMG-Y, humanhuman

Known RBP Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P17096 AP001000.1-201ENST00000526843 742 ntBASIC7.14□□□□□ -1.27
HMGA1P17096 AP006587.5-201ENST00000532033 739 ntBASIC7.14□□□□□ -1.27
HMGA1P17096 OR5BK1P-201ENST00000550421 823 ntBASIC7.14□□□□□ -1.27
HMGA1P17096 FLVCR2-204ENST00000553587 584 ntTSL 2 BASIC7.14□□□□□ -1.27
HMGA1P17096 AL390718.1-201ENST00000566904 506 ntTSL 3 BASIC7.14□□□□□ -1.27
HMGA1P17096 CA10-204ENST00000570565 2276 ntTSL 5 BASIC7.14□□□□□ -1.27
HMGA1P17096 MKL2-205ENST00000572567 2185 ntTSL 2 BASIC7.14□□□□□ -1.27
HMGA1P17096 AC012254.2-203ENST00000588705 561 ntAPPRIS P5 TSL 2 BASIC7.14□□□□□ -1.27
HMGA1P17096 SPATA31A7-206ENST00000619167 4256 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
HMGA1P17096 LINC01876-209ENST00000638047 1983 ntTSL 5 BASIC7.14□□□□□ -1.27
HMGA1P17096 GCNT2-218ENST00000640968 939 ntTSL 5 BASIC7.14□□□□□ -1.27
HMGA1P17096 TLR10-202ENST00000361424 3484 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
HMGA1P17096 LINC01579-207ENST00000557481 3480 ntTSL 5 BASIC7.14□□□□□ -1.27
HMGA1P17096 AC007938.1-201ENST00000562524 2902 ntBASIC7.14□□□□□ -1.27
HMGA1P17096 BMS1-201ENST00000374518 7753 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
HMGA1P17096 CTAGE5-201ENST00000280082 2554 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
HMGA1P17096 TPRG1-204ENST00000433971 2296 ntAPPRIS P1 TSL 2 BASIC7.13□□□□□ -1.27
HMGA1P17096 LINC01492-201ENST00000411575 3738 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
HMGA1P17096 RUNX1T1-201ENST00000265814 7284 ntAPPRIS P3 TSL 5 BASIC7.13□□□□□ -1.27
HMGA1P17096 CELF2-203ENST00000416382 6894 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
HMGA1P17096 TEKT1-201ENST00000338694 3421 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
HMGA1P17096 GLRA2-201ENST00000218075 3216 ntAPPRIS P3 TSL 1 (best) BASIC7.13□□□□□ -1.27
HMGA1P17096 CD46-203ENST00000354848 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC7.13□□□□□ -1.27
HMGA1P17096 AC020978.6-201ENST00000571197 3177 ntBASIC7.13□□□□□ -1.27
HMGA1P17096 AQP4-205ENST00000581374 1586 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
HMGA1P17096 PDE4DIP-205ENST00000369354 8262 ntAPPRIS ALT2 TSL 1 (best) BASIC7.13□□□□□ -1.27
HMGA1P17096 COL21A1-203ENST00000370819 4094 ntAPPRIS ALT1 TSL 1 (best) BASIC7.13□□□□□ -1.27
HMGA1P17096 AL121985.1-201ENST00000598917 1308 ntTSL 5 BASIC7.13□□□□□ -1.27
HMGA1P17096 OR5B2-201ENST00000302581 1049 ntAPPRIS P1 BASIC7.13□□□□□ -1.27
HMGA1P17096 CAV1-203ENST00000393468 845 ntAPPRIS ALT1 TSL 1 (best) BASIC7.13□□□□□ -1.27
HMGA1P17096 RPL7AP51-201ENST00000422016 760 ntBASIC7.13□□□□□ -1.27
HMGA1P17096 LINC00433-201ENST00000424165 888 ntTSL 2 BASIC7.13□□□□□ -1.27
HMGA1P17096 HNRNPA1P30-201ENST00000424329 751 ntTSL 3 BASIC7.13□□□□□ -1.27
HMGA1P17096 CYP4F32P-201ENST00000426492 504 ntBASIC7.13□□□□□ -1.27
HMGA1P17096 GTF2A1-202ENST00000434192 1199 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
HMGA1P17096 AL136460.1-201ENST00000442389 473 ntTSL 3 BASIC7.13□□□□□ -1.27
HMGA1P17096 AL354989.1-201ENST00000448245 635 ntTSL 3 BASIC7.13□□□□□ -1.27
HMGA1P17096 VNN3-210ENST00000450865 596 ntTSL 4 BASIC7.13□□□□□ -1.27
HMGA1P17096 RPS14P8-201ENST00000478778 369 ntBASIC7.13□□□□□ -1.27
HMGA1P17096 RN7SL741P-201ENST00000482473 289 ntBASIC7.13□□□□□ -1.27
HMGA1P17096 MBNL1-217ENST00000485509 1023 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
HMGA1P17096 MBNL1-219ENST00000492948 1054 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
HMGA1P17096 AC004063.1-201ENST00000508358 547 ntTSL 4 BASIC7.13□□□□□ -1.27
HMGA1P17096 SNRPCP6-201ENST00000528310 210 ntBASIC7.13□□□□□ -1.27
HMGA1P17096 TMEM116-208ENST00000549537 1229 ntAPPRIS ALT2 TSL 2 BASIC7.13□□□□□ -1.27
HMGA1P17096 AC005519.1-201ENST00000554490 601 ntBASIC7.13□□□□□ -1.27
HMGA1P17096 SEC11A-209ENST00000560266 1089 ntTSL 5 BASIC7.13□□□□□ -1.27
HMGA1P17096 AC068831.6-201ENST00000560522 795 ntTSL 3 BASIC7.13□□□□□ -1.27
HMGA1P17096 AC087286.3-201ENST00000561409 953 ntTSL 3 BASIC7.13□□□□□ -1.27
HMGA1P17096 MDFIC2-201ENST00000567252 778 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
HMGA1P17096 CTSLP2-201ENST00000580501 394 ntBASIC7.13□□□□□ -1.27
HMGA1P17096 HNRNPA3P9-201ENST00000604913 979 ntBASIC7.13□□□□□ -1.27
HMGA1P17096 AL008582.1-201ENST00000609612 442 ntBASIC7.13□□□□□ -1.27
HMGA1P17096 OR51B2-201ENST00000624187 939 ntAPPRIS P1 BASIC7.13□□□□□ -1.27
HMGA1P17096 ABCD3-202ENST00000370214 3538 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
HMGA1P17096 ZFP90-201ENST00000398253 4384 ntAPPRIS P1 TSL 4 BASIC7.13□□□□□ -1.27
HMGA1P17096 CFI-201ENST00000394634 2159 ntAPPRIS P3 TSL 1 (best) BASIC7.13□□□□□ -1.27
HMGA1P17096 AC096564.2-201ENST00000512428 3147 ntTSL 5 BASIC7.13□□□□□ -1.27
HMGA1P17096 PTPRR-202ENST00000342084 2037 ntAPPRIS ALT2 TSL 2 BASIC7.13□□□□□ -1.27
HMGA1P17096 SECISBP2L-201ENST00000261847 6779 ntAPPRIS P3 TSL 1 (best) BASIC7.13□□□□□ -1.27
HMGA1P17096 ZRANB1-201ENST00000359653 5695 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
HMGA1P17096 AKR1C2-201ENST00000380753 3756 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
HMGA1P17096 AC005614.1-201ENST00000598952 3653 ntBASIC7.13□□□□□ -1.27
HMGA1P17096 ZNF480-201ENST00000334564 1843 ntAPPRIS ALT2 TSL 2 BASIC7.13□□□□□ -1.27
HMGA1P17096 UTY-216ENST00000624098 3636 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
HMGA1P17096 KIDINS220-206ENST00000473731 7248 ntTSL 5 BASIC7.13□□□□□ -1.27
HMGA1P17096 LINC01138-210ENST00000640832 1709 ntTSL 5 BASIC7.13□□□□□ -1.27
HMGA1P17096 SRPX2-201ENST00000373004 6679 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
HMGA1P17096 A2M-201ENST00000318602 4844 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
HMGA1P17096 AL356019.2-201ENST00000556738 3829 ntBASIC7.12□□□□□ -1.27
HMGA1P17096 CD200R1-202ENST00000308611 2299 ntAPPRIS P4 TSL 1 (best) BASIC7.12□□□□□ -1.27
HMGA1P17096 AC217777.1-201ENST00000570034 1471 ntBASIC7.12□□□□□ -1.27
HMGA1P17096 COL6A4P1-202ENST00000487147 4317 ntBASIC7.12□□□□□ -1.27
HMGA1P17096 C11orf1-203ENST00000529270 1437 ntTSL 2 BASIC7.12□□□□□ -1.27
HMGA1P17096 HIVEP2-202ENST00000367603 9724 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
HMGA1P17096 DMC1-203ENST00000428462 2082 ntTSL 2 BASIC7.12□□□□□ -1.27
HMGA1P17096 AP002026.1-201ENST00000500358 4825 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
HMGA1P17096 CLASP2-213ENST00000480013 5972 ntTSL 5 BASIC7.12□□□□□ -1.27
HMGA1P17096 MUC3A-203ENST00000483366 9944 ntAPPRIS ALT2 TSL 5 BASIC7.12□□□□□ -1.27
HMGA1P17096 HIST1H2BA-201ENST00000274764 516 ntAPPRIS P1 BASIC7.12□□□□□ -1.27
HMGA1P17096 RNA5SP140-201ENST00000364524 92 ntBASIC7.12□□□□□ -1.27
HMGA1P17096 SNORA70.3-201ENST00000365075 132 ntBASIC7.12□□□□□ -1.27
HMGA1P17096 C1orf194-202ENST00000369945 534 ntTSL 5 BASIC7.12□□□□□ -1.27
HMGA1P17096 NUDT5-203ENST00000378940 1126 ntTSL 5 BASIC7.12□□□□□ -1.27
HMGA1P17096 GAPDHP57-201ENST00000424400 585 ntBASIC7.12□□□□□ -1.27
HMGA1P17096 AL513348.1-201ENST00000435554 440 ntTSL 3 BASIC7.12□□□□□ -1.27
HMGA1P17096 AL138767.3-201ENST00000438082 495 ntTSL 3 BASIC7.12□□□□□ -1.27
HMGA1P17096 AC114812.2-201ENST00000439336 663 ntTSL 2 BASIC7.12□□□□□ -1.27
HMGA1P17096 LINC02384-202ENST00000441255 567 ntTSL 4 BASIC7.12□□□□□ -1.27
HMGA1P17096 GAPDHP37-201ENST00000442317 968 ntBASIC7.12□□□□□ -1.27
HMGA1P17096 AC092164.1-201ENST00000452212 726 ntTSL 2 BASIC7.12□□□□□ -1.27
HMGA1P17096 PTTG2-201ENST00000504686 691 ntAPPRIS P1 BASIC7.12□□□□□ -1.27
HMGA1P17096 SSX8-201ENST00000506270 579 ntBASIC7.12□□□□□ -1.27
HMGA1P17096 AC008957.1-203ENST00000508745 589 ntTSL 3 BASIC7.12□□□□□ -1.27
HMGA1P17096 AC097494.1-201ENST00000512898 732 ntTSL 3 BASIC7.12□□□□□ -1.27
HMGA1P17096 AC026774.2-201ENST00000513990 1098 ntBASIC7.12□□□□□ -1.27
HMGA1P17096 AC022973.4-201ENST00000524100 917 ntTSL 2 BASIC7.12□□□□□ -1.27
HMGA1P17096 AP001831.1-201ENST00000524610 411 ntTSL 3 BASIC7.12□□□□□ -1.27
HMGA1P17096 RPL27A-210ENST00000531978 867 ntTSL 2 BASIC7.12□□□□□ -1.27
HMGA1P17096 MIR4732-201ENST00000581873 76 ntBASIC7.12□□□□□ -1.27
Retrieved 100 of 98,524 protein–RNA pairs in 85.9 ms