Protein–RNA interactions for Protein: P0C091

FREM3, FRAS1-related extracellular matrix protein 3, humanhuman

Predictions only

Length 2,139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM3P0C091 AL138974.1-201ENST00000551227 741 ntTSL 5 BASIC6.3□□□□□ -1.4
FREM3P0C091 AC027801.5-201ENST00000574365 416 ntTSL 3 BASIC6.3□□□□□ -1.4
FREM3P0C091 AC104984.3-201ENST00000581946 546 ntTSL 5 BASIC6.3□□□□□ -1.4
FREM3P0C091 CLK4-214ENST00000611575 1206 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
FREM3P0C091 PFKM-232ENST00000629846 381 ntTSL 4 BASIC6.3□□□□□ -1.4
FREM3P0C091 VANGL1-202ENST00000355485 8691 ntAPPRIS P3 TSL 1 (best) BASIC6.3□□□□□ -1.4
FREM3P0C091 EHBP1-203ENST00000405289 3591 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
FREM3P0C091 NUMB-217ENST00000555738 1553 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
FREM3P0C091 NUMB-232ENST00000560335 1586 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
FREM3P0C091 AC012668.3-202ENST00000417485 1642 ntTSL 5 BASIC6.3□□□□□ -1.4
FREM3P0C091 SLF2-202ENST00000370269 3712 ntAPPRIS ALT2 TSL 1 (best) BASIC6.3□□□□□ -1.4
FREM3P0C091 AC096582.3-201ENST00000636578 3716 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
FREM3P0C091 SLC25A40-201ENST00000341119 4045 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
FREM3P0C091 MAPRE2-203ENST00000436190 4323 ntTSL 2 BASIC6.3□□□□□ -1.4
FREM3P0C091 FAM83B-201ENST00000306858 3167 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
FREM3P0C091 AL450327.1-201ENST00000430931 2632 ntTSL 5 BASIC6.3□□□□□ -1.4
FREM3P0C091 PTPRG-AS1-204ENST00000474795 2661 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
FREM3P0C091 OR2L13-203ENST00000641893 1817 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
FREM3P0C091 ATXN2-214ENST00000535949 3205 ntAPPRIS ALT2 TSL 1 (best) BASIC6.3□□□□□ -1.4
FREM3P0C091 ATP5BP1-201ENST00000411980 1574 ntBASIC6.29□□□□□ -1.4
FREM3P0C091 MKL2-201ENST00000318282 8608 ntAPPRIS P3 TSL 5 BASIC6.29□□□□□ -1.4
FREM3P0C091 TAS2R7-201ENST00000240687 1096 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
FREM3P0C091 OR52H1-201ENST00000322653 1057 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
FREM3P0C091 AC096571.1-201ENST00000325407 306 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
FREM3P0C091 ERMN-202ENST00000409216 746 ntTSL 4 BASIC6.29□□□□□ -1.4
FREM3P0C091 Z82198.3-201ENST00000421145 199 ntBASIC6.29□□□□□ -1.4
FREM3P0C091 AL358394.1-201ENST00000422807 535 ntTSL 2 BASIC6.29□□□□□ -1.4
FREM3P0C091 AC004470.1-201ENST00000442155 382 ntTSL 5 BASIC6.29□□□□□ -1.4
FREM3P0C091 PRDX1P1-201ENST00000449329 596 ntBASIC6.29□□□□□ -1.4
FREM3P0C091 KF459542.1-201ENST00000450908 553 ntBASIC6.29□□□□□ -1.4
FREM3P0C091 RN7SL518P-201ENST00000491887 280 ntBASIC6.29□□□□□ -1.4
FREM3P0C091 EIF4E2P2-201ENST00000492033 736 ntBASIC6.29□□□□□ -1.4
FREM3P0C091 AC010834.1-201ENST00000517998 696 ntTSL 2 BASIC6.29□□□□□ -1.4
FREM3P0C091 AC107909.1-201ENST00000523226 595 ntTSL 5 BASIC6.29□□□□□ -1.4
FREM3P0C091 AC116903.1-201ENST00000557683 539 ntTSL 4 BASIC6.29□□□□□ -1.4
FREM3P0C091 MIR3135A-201ENST00000578460 77 ntBASIC6.29□□□□□ -1.4
FREM3P0C091 RPL7AP69-201ENST00000595306 806 ntBASIC6.29□□□□□ -1.4
FREM3P0C091 MIR6780B-201ENST00000610307 79 ntBASIC6.29□□□□□ -1.4
FREM3P0C091 AC211486.4-201ENST00000621495 113 ntBASIC6.29□□□□□ -1.4
FREM3P0C091 CYP2C8-213ENST00000628935 924 ntTSL 5 BASIC6.29□□□□□ -1.4
FREM3P0C091 FAM111B-201ENST00000343597 3488 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
FREM3P0C091 FKBP5-202ENST00000536438 3940 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
FREM3P0C091 AC022819.1-201ENST00000563495 3910 ntBASIC6.29□□□□□ -1.4
FREM3P0C091 LRRC37A4P-201ENST00000579913 3243 ntTSL 2 BASIC6.29□□□□□ -1.4
FREM3P0C091 FGF10-201ENST00000264664 2193 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
FREM3P0C091 SUPT6H-201ENST00000314616 6523 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
FREM3P0C091 NPHP1-201ENST00000316534 3756 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
FREM3P0C091 EBF1-203ENST00000517373 2277 ntTSL 5 BASIC6.29□□□□□ -1.4
FREM3P0C091 RSC1A1-201ENST00000345034 1854 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
FREM3P0C091 MAML2-202ENST00000618849 3154 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
FREM3P0C091 CYP4A22-206ENST00000619754 2351 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
FREM3P0C091 PPP2R5C-205ENST00000445439 1526 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
FREM3P0C091 SP110-201ENST00000258381 2426 ntAPPRIS P4 TSL 2 BASIC6.29□□□□□ -1.4
FREM3P0C091 DDX18-201ENST00000263239 3796 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
FREM3P0C091 FAM71F1-207ENST00000485070 1574 ntTSL 2 BASIC6.29□□□□□ -1.4
FREM3P0C091 KANTR-203ENST00000604062 4251 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
FREM3P0C091 FAM71F1-209ENST00000621392 1591 ntTSL 5 BASIC6.29□□□□□ -1.4
FREM3P0C091 AL590065.1-201ENST00000603371 4774 ntBASIC6.29□□□□□ -1.4
FREM3P0C091 CCDC152-201ENST00000361970 3431 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
FREM3P0C091 MAGT1-201ENST00000358075 4047 ntAPPRIS P2 TSL 1 (best) BASIC6.29□□□□□ -1.4
FREM3P0C091 PHKB-201ENST00000299167 5464 ntTSL 5 BASIC6.29□□□□□ -1.4
FREM3P0C091 CD96-202ENST00000352690 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC6.29□□□□□ -1.4
FREM3P0C091 KAT14-202ENST00000435364 3618 ntAPPRIS P2 TSL 1 (best) BASIC6.29□□□□□ -1.4
FREM3P0C091 BORCS7-ASMT-201ENST00000299353 2670 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
FREM3P0C091 AMPD3-209ENST00000529507 3156 ntAPPRIS P1 TSL 2 BASIC6.29□□□□□ -1.4
FREM3P0C091 SLC4A4-204ENST00000425175 7596 ntTSL 5 BASIC6.29□□□□□ -1.4
FREM3P0C091 AC092634.1-201ENST00000366505 199 ntBASIC6.29□□□□□ -1.4
FREM3P0C091 RSPO3-202ENST00000368317 1290 ntTSL 2 BASIC6.29□□□□□ -1.4
FREM3P0C091 AP000812.1-201ENST00000378140 477 ntTSL 3 BASIC6.29□□□□□ -1.4
FREM3P0C091 MIR551B-201ENST00000384984 96 ntBASIC6.29□□□□□ -1.4
FREM3P0C091 RN7SKP205-201ENST00000410999 307 ntBASIC6.29□□□□□ -1.4
FREM3P0C091 NUCB1-AS1-201ENST00000416432 433 ntTSL 2 BASIC6.29□□□□□ -1.4
FREM3P0C091 CHL1-AS1-201ENST00000417612 913 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
FREM3P0C091 SUMO2P8-201ENST00000434672 286 ntBASIC6.29□□□□□ -1.4
FREM3P0C091 RAB7A-205ENST00000485280 507 ntTSL 3 BASIC6.29□□□□□ -1.4
FREM3P0C091 AP000426.1-201ENST00000518749 361 ntTSL 3 BASIC6.29□□□□□ -1.4
FREM3P0C091 AC012065.3-201ENST00000602736 439 ntBASIC6.29□□□□□ -1.4
FREM3P0C091 PRSS3P3-201ENST00000612253 692 ntTSL 5 BASIC6.29□□□□□ -1.4
FREM3P0C091 OR4X2-201ENST00000624868 1025 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
FREM3P0C091 AC007359.1-202ENST00000419158 2939 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
FREM3P0C091 AC008175.1-201ENST00000446299 2939 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
FREM3P0C091 TDP1-213ENST00000555880 1894 ntTSL 5 BASIC6.29□□□□□ -1.4
FREM3P0C091 ACKR2-201ENST00000422265 2956 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
FREM3P0C091 PGAP1-201ENST00000354764 11114 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
FREM3P0C091 ADH1B-201ENST00000305046 4072 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
FREM3P0C091 AC010132.4-201ENST00000569883 1368 ntBASIC6.29□□□□□ -1.4
FREM3P0C091 PTPRB-209ENST00000550857 5839 ntAPPRIS ALT2 TSL 1 (best) BASIC6.29□□□□□ -1.4
FREM3P0C091 FAM227A-205ENST00000535113 10322 ntAPPRIS ALT2 TSL 5 BASIC6.29□□□□□ -1.4
FREM3P0C091 RBMY1A3P-201ENST00000382670 1404 ntBASIC6.29□□□□□ -1.4
FREM3P0C091 SRPX2-201ENST00000373004 6679 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
FREM3P0C091 CHORDC1-201ENST00000320585 2654 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
FREM3P0C091 KLHL5-204ENST00000504108 2690 ntTSL 2 BASIC6.29□□□□□ -1.4
FREM3P0C091 ADAMTS3-204ENST00000622135 4479 ntAPPRIS P1 TSL 2 BASIC6.29□□□□□ -1.4
FREM3P0C091 SENP1-201ENST00000448372 4679 ntAPPRIS P2 TSL 1 (best) BASIC6.29□□□□□ -1.4
FREM3P0C091 ZNF519-207ENST00000590202 2830 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
FREM3P0C091 SLC9A9-201ENST00000316549 3627 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
FREM3P0C091 AC008937.3-201ENST00000606813 1700 ntBASIC6.28□□□□□ -1.4
FREM3P0C091 AMY1A-201ENST00000370083 1790 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
FREM3P0C091 SLC11A2-201ENST00000262051 3986 ntAPPRIS ALT1 TSL 1 (best) BASIC6.28□□□□□ -1.4
FREM3P0C091 SYTL5-202ENST00000456733 4704 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 77.5 ms