Protein–RNA interactions for Protein: Q9Y6Z2

LINC01558, Uncharacterized protein encoded by LINC01558, humanhuman

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01558Q9Y6Z2 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC3.4□□□□□ -1.86
LINC01558Q9Y6Z2 ZNF761-202ENST00000432094 4061 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.86
LINC01558Q9Y6Z2 RAET1L-201ENST00000286380 802 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
LINC01558Q9Y6Z2 FCHO2-201ENST00000287761 1287 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
LINC01558Q9Y6Z2 BOLA3-201ENST00000295326 444 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
LINC01558Q9Y6Z2 OR4D5-201ENST00000307033 1095 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
LINC01558Q9Y6Z2 NAP1L4P1-201ENST00000319092 1157 ntBASIC3.4□□□□□ -1.87
LINC01558Q9Y6Z2 SERF2-202ENST00000339624 506 ntTSL 2 BASIC3.4□□□□□ -1.87
LINC01558Q9Y6Z2 SEC31A-204ENST00000355196 4104 ntAPPRIS P4 TSL 2 BASIC3.4□□□□□ -1.87
LINC01558Q9Y6Z2 U3.7-201ENST00000363668 216 ntBASIC3.4□□□□□ -1.87
LINC01558Q9Y6Z2 GPX2-201ENST00000389614 990 ntAPPRIS P2 TSL 1 (best) BASIC3.4□□□□□ -1.87
LINC01558Q9Y6Z2 IGLV3-25-201ENST00000390305 380 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
LINC01558Q9Y6Z2 TBC1D23-202ENST00000394144 3677 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
LINC01558Q9Y6Z2 VIM2P-201ENST00000402383 1294 ntBASIC3.4□□□□□ -1.87
LINC01558Q9Y6Z2 RN7SKP97-201ENST00000410966 333 ntBASIC3.4□□□□□ -1.87
LINC01558Q9Y6Z2 NPM1P40-201ENST00000412758 733 ntBASIC3.4□□□□□ -1.87
LINC01558Q9Y6Z2 KCNMA1-AS3-201ENST00000418515 701 ntTSL 3 BASIC3.4□□□□□ -1.87
LINC01558Q9Y6Z2 AL365204.1-201ENST00000423440 1430 ntTSL 5 BASIC3.4□□□□□ -1.87
LINC01558Q9Y6Z2 ELOA-AS1-201ENST00000427796 1074 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
LINC01558Q9Y6Z2 AL139220.2-213ENST00000431800 674 ntTSL 3 BASIC3.4□□□□□ -1.87
LINC01558Q9Y6Z2 TEX41-206ENST00000432608 661 ntTSL 3 BASIC3.4□□□□□ -1.87
LINC01558Q9Y6Z2 USP24P1-201ENST00000433802 779 ntBASIC3.4□□□□□ -1.87
LINC01558Q9Y6Z2 LINC01732-201ENST00000435023 542 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
LINC01558Q9Y6Z2 RPL21P88-201ENST00000436649 436 ntBASIC3.4□□□□□ -1.87
LINC01558Q9Y6Z2 AL353751.1-203ENST00000437032 603 ntTSL 3 BASIC3.4□□□□□ -1.87
LINC01558Q9Y6Z2 MEOX2-AS1-201ENST00000442176 697 ntTSL 3 BASIC3.4□□□□□ -1.87
LINC01558Q9Y6Z2 TCEA1P3-201ENST00000443005 880 ntBASIC3.4□□□□□ -1.87
LINC01558Q9Y6Z2 LINC01789-201ENST00000443123 860 ntTSL 5 BASIC3.4□□□□□ -1.87
LINC01558Q9Y6Z2 KRTAP2-5P-201ENST00000446109 396 ntBASIC3.4□□□□□ -1.87
LINC01558Q9Y6Z2 AL109933.1-201ENST00000448126 292 ntTSL 5 BASIC3.4□□□□□ -1.87
LINC01558Q9Y6Z2 OR7H1P-201ENST00000448965 922 ntBASIC3.4□□□□□ -1.87
LINC01558Q9Y6Z2 CBX1P2-201ENST00000453841 458 ntBASIC3.4□□□□□ -1.87
LINC01558Q9Y6Z2 PET100-201ENST00000456958 219 ntTSL 2 BASIC3.4□□□□□ -1.87
LINC01558Q9Y6Z2 RN7SL591P-201ENST00000496150 292 ntBASIC3.4□□□□□ -1.87
LINC01558Q9Y6Z2 LINC02502-201ENST00000505122 642 ntTSL 4 BASIC3.4□□□□□ -1.87
LINC01558Q9Y6Z2 AC026700.1-201ENST00000512074 544 ntBASIC3.4□□□□□ -1.87
LINC01558Q9Y6Z2 AC097494.1-201ENST00000512898 732 ntTSL 3 BASIC3.4□□□□□ -1.87
LINC01558Q9Y6Z2 AC073848.1-201ENST00000514339 457 ntTSL 3 BASIC3.4□□□□□ -1.87
LINC01558Q9Y6Z2 KRTAP9-12P-201ENST00000514388 532 ntBASIC3.4□□□□□ -1.87
LINC01558Q9Y6Z2 AP003354.2-201ENST00000517983 563 ntTSL 4 BASIC3.4□□□□□ -1.87
LINC01558Q9Y6Z2 AC025524.2-202ENST00000523042 535 ntTSL 4 BASIC3.4□□□□□ -1.87
LINC01558Q9Y6Z2 AC023644.1-201ENST00000523380 859 ntTSL 5 BASIC3.4□□□□□ -1.87
LINC01558Q9Y6Z2 AP000424.1-202ENST00000523831 331 ntTSL 2 BASIC3.4□□□□□ -1.87
LINC01558Q9Y6Z2 OR10D4P-201ENST00000525892 951 ntBASIC3.4□□□□□ -1.87
LINC01558Q9Y6Z2 LINC01499-201ENST00000528720 553 ntTSL 4 BASIC3.4□□□□□ -1.87
LINC01558Q9Y6Z2 C14orf119-202ENST00000554203 725 ntAPPRIS P1 TSL 2 BASIC3.4□□□□□ -1.87
LINC01558Q9Y6Z2 AC018523.2-201ENST00000555531 1221 ntAPPRIS P1 TSL 2 BASIC3.4□□□□□ -1.87
LINC01558Q9Y6Z2 LINC02284-201ENST00000558120 573 ntTSL 5 BASIC3.4□□□□□ -1.87
LINC01558Q9Y6Z2 AC023908.2-201ENST00000558616 318 ntTSL 3 BASIC3.4□□□□□ -1.87
LINC01558Q9Y6Z2 AC073964.1-201ENST00000558938 308 ntTSL 3 BASIC3.4□□□□□ -1.87
LINC01558Q9Y6Z2 AP001005.2-201ENST00000575066 763 ntBASIC3.4□□□□□ -1.87
LINC01558Q9Y6Z2 AP005328.1-201ENST00000577719 681 ntTSL 3 BASIC3.4□□□□□ -1.87
LINC01558Q9Y6Z2 MIR4472-2-201ENST00000582069 67 ntBASIC3.4□□□□□ -1.87
LINC01558Q9Y6Z2 MIR4440-201ENST00000583986 98 ntBASIC3.4□□□□□ -1.87
LINC01558Q9Y6Z2 AC011444.4-201ENST00000586415 418 ntBASIC3.4□□□□□ -1.87
LINC01558Q9Y6Z2 AP001198.2-201ENST00000593121 466 ntTSL 2 BASIC3.4□□□□□ -1.87
LINC01558Q9Y6Z2 ZNF208-202ENST00000597040 781 ntTSL 2 BASIC3.4□□□□□ -1.87
LINC01558Q9Y6Z2 AC008750.4-201ENST00000600974 219 ntTSL 3 BASIC3.4□□□□□ -1.87
LINC01558Q9Y6Z2 Z98949.1-213ENST00000608921 856 ntTSL 5 BASIC3.4□□□□□ -1.87
LINC01558Q9Y6Z2 Metazoa_SRP.159-201ENST00000612585 265 ntBASIC3.4□□□□□ -1.87
LINC01558Q9Y6Z2 MED24-234ENST00000614384 454 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
LINC01558Q9Y6Z2 SERPINC1-204ENST00000617423 984 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
LINC01558Q9Y6Z2 Metazoa_SRP.76-201ENST00000619429 290 ntBASIC3.4□□□□□ -1.87
LINC01558Q9Y6Z2 KCNQ1OT1_2.1-201ENST00000619507 196 ntBASIC3.4□□□□□ -1.87
LINC01558Q9Y6Z2 PAX8-AS1-219ENST00000623306 840 ntTSL 5 BASIC3.4□□□□□ -1.87
LINC01558Q9Y6Z2 AC024580.2-201ENST00000623363 231 ntBASIC3.4□□□□□ -1.87
LINC01558Q9Y6Z2 AC005618.4-201ENST00000625053 554 ntBASIC3.4□□□□□ -1.87
LINC01558Q9Y6Z2 LINC01358-205ENST00000625548 874 ntTSL 5 BASIC3.4□□□□□ -1.87
LINC01558Q9Y6Z2 AL390726.6-203ENST00000636076 473 ntBASIC3.4□□□□□ -1.87
LINC01558Q9Y6Z2 AC099654.6-201ENST00000636487 512 ntBASIC3.4□□□□□ -1.87
LINC01558Q9Y6Z2 Z96074.1-203ENST00000637685 1746 ntTSL 5 BASIC3.4□□□□□ -1.87
LINC01558Q9Y6Z2 TPK1-214ENST00000639328 826 ntTSL 5 BASIC3.4□□□□□ -1.87
LINC01558Q9Y6Z2 OR8B3-202ENST00000641139 2170 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
LINC01558Q9Y6Z2 OLMALINC-205ENST00000641708 1184 ntBASIC3.4□□□□□ -1.87
LINC01558Q9Y6Z2 MAPK10-350ENST00000641777 965 ntBASIC3.4□□□□□ -1.87
LINC01558Q9Y6Z2 SCN1A-209ENST00000635750 8299 ntAPPRIS P3 TSL 5 BASIC3.4□□□□□ -1.87
LINC01558Q9Y6Z2 LINGO2-204ENST00000613945 2981 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.87
LINC01558Q9Y6Z2 C2CD6-203ENST00000439802 1639 ntAPPRIS ALT2 TSL 2 BASIC3.4□□□□□ -1.87
LINC01558Q9Y6Z2 PTPRO-203ENST00000442921 3030 ntAPPRIS ALT2 TSL 1 (best) BASIC3.4□□□□□ -1.87
LINC01558Q9Y6Z2 ZBTB37-202ENST00000367702 1337 ntTSL 5 BASIC3.4□□□□□ -1.87
LINC01558Q9Y6Z2 AC022613.3-201ENST00000560740 1346 ntBASIC3.4□□□□□ -1.87
LINC01558Q9Y6Z2 ZC3H12B-201ENST00000338957 7256 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
LINC01558Q9Y6Z2 NFX1-201ENST00000318524 3513 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
LINC01558Q9Y6Z2 FNIP1-201ENST00000307954 6366 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
LINC01558Q9Y6Z2 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
LINC01558Q9Y6Z2 PROM1-210ENST00000510224 4006 ntAPPRIS P3 TSL 5 BASIC3.4□□□□□ -1.87
LINC01558Q9Y6Z2 CNTN5-201ENST00000279463 5925 ntTSL 5 BASIC3.4□□□□□ -1.87
LINC01558Q9Y6Z2 DZIP3-202ENST00000463306 4246 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
LINC01558Q9Y6Z2 AC010127.1-209ENST00000447809 2305 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
LINC01558Q9Y6Z2 SMC2-202ENST00000374787 4266 ntAPPRIS P1 TSL 2 BASIC3.39□□□□□ -1.87
LINC01558Q9Y6Z2 SLCO1A2-201ENST00000307378 7682 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
LINC01558Q9Y6Z2 TUBAP-201ENST00000425085 1352 ntBASIC3.39□□□□□ -1.87
LINC01558Q9Y6Z2 MAPK10-379ENST00000642013 1385 ntBASIC3.39□□□□□ -1.87
LINC01558Q9Y6Z2 PPP1R1C-202ENST00000409137 3004 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
LINC01558Q9Y6Z2 RBPJP7-201ENST00000442803 1447 ntBASIC3.39□□□□□ -1.87
LINC01558Q9Y6Z2 TPRG1-204ENST00000433971 2296 ntAPPRIS P1 TSL 2 BASIC3.39□□□□□ -1.87
LINC01558Q9Y6Z2 RPL27-201ENST00000253788 490 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
LINC01558Q9Y6Z2 GOLPH3L-201ENST00000271732 2999 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
LINC01558Q9Y6Z2 RNASE3-201ENST00000304639 720 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
LINC01558Q9Y6Z2 AZI2-202ENST00000334100 943 ntTSL 3 BASIC3.39□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 80.6 ms