Protein–RNA interactions for Protein: Q9HC56

PCDH9, Protocadherin-9, humanhuman

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9Q9HC56 PCED1B-AS1-207ENST00000551432 522 ntTSL 5 BASIC7.23□□□□□ -1.25
PCDH9Q9HC56 SNHG14-217ENST00000552781 552 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
PCDH9Q9HC56 AC096708.2-201ENST00000577676 512 ntBASIC7.23□□□□□ -1.25
PCDH9Q9HC56 AL050403.2-202ENST00000603462 492 ntTSL 5 BASIC7.23□□□□□ -1.25
PCDH9Q9HC56 AC107419.1-202ENST00000608735 1081 ntTSL 3 BASIC7.23□□□□□ -1.25
PCDH9Q9HC56 AL669942.1-206ENST00000610473 783 ntTSL 3 BASIC7.23□□□□□ -1.25
PCDH9Q9HC56 AC131009.3-201ENST00000621809 287 ntBASIC7.23□□□□□ -1.25
PCDH9Q9HC56 AC016542.3-201ENST00000623520 619 ntBASIC7.23□□□□□ -1.25
PCDH9Q9HC56 WDR93-204ENST00000558000 1886 ntAPPRIS ALT2 TSL 1 (best) BASIC7.23□□□□□ -1.25
PCDH9Q9HC56 UNC13B-209ENST00000635942 14550 ntAPPRIS ALT2 TSL 5 BASIC7.23□□□□□ -1.25
PCDH9Q9HC56 SLC30A6-201ENST00000282587 5089 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
PCDH9Q9HC56 CLCA3P-203ENST00000490028 2781 ntBASIC7.23□□□□□ -1.25
PCDH9Q9HC56 LDHA-206ENST00000430553 1310 ntTSL 2 BASIC7.23□□□□□ -1.25
PCDH9Q9HC56 YES1-201ENST00000314574 4441 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
PCDH9Q9HC56 ZNF559-212ENST00000592896 1488 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
PCDH9Q9HC56 LRRC31-201ENST00000264676 2355 ntAPPRIS ALT2 TSL 2 BASIC7.23□□□□□ -1.25
PCDH9Q9HC56 PPP4R3CP-201ENST00000412172 3131 ntAPPRIS P1 BASIC7.23□□□□□ -1.25
PCDH9Q9HC56 ZNF91-202ENST00000397082 3572 ntAPPRIS ALT2 TSL 2 BASIC7.23□□□□□ -1.25
PCDH9Q9HC56 MED31-201ENST00000225728 1654 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
PCDH9Q9HC56 KALRN-204ENST00000360013 10806 ntAPPRIS P5 TSL 5 BASIC7.22□□□□□ -1.25
PCDH9Q9HC56 LAMB4-201ENST00000205386 5857 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
PCDH9Q9HC56 METTL21EP-202ENST00000605100 2312 ntTSL 2 BASIC7.22□□□□□ -1.25
PCDH9Q9HC56 PROX1-AS1-202ENST00000433082 5266 ntTSL 5 BASIC7.22□□□□□ -1.25
PCDH9Q9HC56 BCL2L14-201ENST00000266434 2039 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
PCDH9Q9HC56 NRCAM-203ENST00000379024 5782 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
PCDH9Q9HC56 POLA1-202ENST00000379068 5486 ntAPPRIS ALT2 TSL 5 BASIC7.22□□□□□ -1.25
PCDH9Q9HC56 ZMYND11-204ENST00000381604 4066 ntTSL 5 BASIC7.22□□□□□ -1.25
PCDH9Q9HC56 LINC01362-202ENST00000452901 1712 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
PCDH9Q9HC56 EIF4A1P13-201ENST00000415667 230 ntBASIC7.22□□□□□ -1.25
PCDH9Q9HC56 ELOBP4-201ENST00000423418 296 ntBASIC7.22□□□□□ -1.25
PCDH9Q9HC56 CENPN-204ENST00000428963 971 ntTSL 2 BASIC7.22□□□□□ -1.25
PCDH9Q9HC56 AL035691.1-201ENST00000434562 595 ntTSL 3 BASIC7.22□□□□□ -1.25
PCDH9Q9HC56 FAM177B-204ENST00000445590 1096 ntAPPRIS P1 TSL 5 BASIC7.22□□□□□ -1.25
PCDH9Q9HC56 AL929410.2-201ENST00000451170 189 ntBASIC7.22□□□□□ -1.25
PCDH9Q9HC56 BZW1P1-201ENST00000454901 1240 ntBASIC7.22□□□□□ -1.25
PCDH9Q9HC56 AL592464.2-201ENST00000457440 607 ntTSL 2 BASIC7.22□□□□□ -1.25
PCDH9Q9HC56 AC055758.2-201ENST00000495382 799 ntTSL 2 BASIC7.22□□□□□ -1.25
PCDH9Q9HC56 AC096736.3-201ENST00000510753 993 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
PCDH9Q9HC56 LECT2-203ENST00000512872 762 ntTSL 5 BASIC7.22□□□□□ -1.25
PCDH9Q9HC56 LINC01262-201ENST00000513681 879 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
PCDH9Q9HC56 RN7SKP242-201ENST00000515967 289 ntBASIC7.22□□□□□ -1.25
PCDH9Q9HC56 OR4C1P-201ENST00000530880 937 ntBASIC7.22□□□□□ -1.25
PCDH9Q9HC56 GMDS-AS1-212ENST00000534160 720 ntTSL 3 BASIC7.22□□□□□ -1.25
PCDH9Q9HC56 AL591767.3-201ENST00000554632 525 ntBASIC7.22□□□□□ -1.25
PCDH9Q9HC56 AC015818.6-201ENST00000584274 634 ntBASIC7.22□□□□□ -1.25
PCDH9Q9HC56 ZNF431-206ENST00000599296 586 ntTSL 5 BASIC7.22□□□□□ -1.25
PCDH9Q9HC56 AL031429.2-201ENST00000602605 649 ntBASIC7.22□□□□□ -1.25
PCDH9Q9HC56 AC139493.1-201ENST00000604368 397 ntBASIC7.22□□□□□ -1.25
PCDH9Q9HC56 AC019080.4-201ENST00000606200 564 ntTSL 5 BASIC7.22□□□□□ -1.25
PCDH9Q9HC56 AC243919.1-201ENST00000613086 785 ntTSL 5 BASIC7.22□□□□□ -1.25
PCDH9Q9HC56 LINC01108-202ENST00000635227 776 ntTSL 3 BASIC7.22□□□□□ -1.25
PCDH9Q9HC56 JAML-213ENST00000640745 951 ntTSL 5 BASIC7.22□□□□□ -1.25
PCDH9Q9HC56 CCDC93-201ENST00000319432 6896 ntAPPRIS ALT1 TSL 5 BASIC7.22□□□□□ -1.25
PCDH9Q9HC56 CCDC93-202ENST00000376300 6899 ntAPPRIS P2 TSL 1 (best) BASIC7.22□□□□□ -1.25
PCDH9Q9HC56 PHLPP2-201ENST00000393524 8467 ntTSL 2 BASIC7.22□□□□□ -1.25
PCDH9Q9HC56 MEF2C-201ENST00000340208 6192 ntAPPRIS ALT1 TSL 1 (best) BASIC7.22□□□□□ -1.25
PCDH9Q9HC56 VWA5A-203ENST00000392748 3419 ntAPPRIS P4 TSL 1 (best) BASIC7.22□□□□□ -1.25
PCDH9Q9HC56 PHF11-201ENST00000357596 1471 ntAPPRIS ALT2 TSL 5 BASIC7.22□□□□□ -1.25
PCDH9Q9HC56 MOB4-201ENST00000233892 3785 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
PCDH9Q9HC56 GON4L-204ENST00000437809 7713 ntAPPRIS P3 TSL 5 BASIC7.22□□□□□ -1.25
PCDH9Q9HC56 BMX-201ENST00000342014 2499 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
PCDH9Q9HC56 NPIPB5-205ENST00000424340 3801 ntAPPRIS P2 TSL 1 (best) BASIC7.22□□□□□ -1.25
PCDH9Q9HC56 NCOR1-205ENST00000395857 9501 ntTSL 5 BASIC7.22□□□□□ -1.25
PCDH9Q9HC56 ZMYND11-215ENST00000558098 1859 ntTSL 1 (best) BASIC7.21□□□□□ -1.25
PCDH9Q9HC56 TXNRD1-205ENST00000503506 3930 ntAPPRIS P2 TSL 1 (best) BASIC7.21□□□□□ -1.25
PCDH9Q9HC56 CABYR-216ENST00000621648 2226 ntAPPRIS P4 TSL 1 (best) BASIC7.21□□□□□ -1.25
PCDH9Q9HC56 DRP2-204ENST00000538510 6852 ntAPPRIS P3 TSL 2 BASIC7.21□□□□□ -1.25
PCDH9Q9HC56 RNGTT-203ENST00000538899 1374 ntTSL 1 (best) BASIC7.21□□□□□ -1.25
PCDH9Q9HC56 KIAA0586-201ENST00000261244 4807 ntAPPRIS P3 TSL 1 (best) BASIC7.21□□□□□ -1.25
PCDH9Q9HC56 PKIB-211ENST00000615438 1936 ntTSL 5 BASIC7.21□□□□□ -1.25
PCDH9Q9HC56 NEDD9-216ENST00000620854 4086 ntTSL 5 BASIC7.21□□□□□ -1.25
PCDH9Q9HC56 CATSPER2-202ENST00000381761 1758 ntTSL 1 (best) BASIC7.21□□□□□ -1.25
PCDH9Q9HC56 DACH2-207ENST00000510272 1764 ntTSL 2 BASIC7.21□□□□□ -1.25
PCDH9Q9HC56 ERLIN2-211ENST00000523887 2347 ntTSL 2 BASIC7.21□□□□□ -1.26
PCDH9Q9HC56 AL117339.4-201ENST00000608335 7063 ntBASIC7.21□□□□□ -1.26
PCDH9Q9HC56 RNASE9-209ENST00000557068 2703 ntAPPRIS P3 TSL 2 BASIC7.21□□□□□ -1.26
PCDH9Q9HC56 GNG3-201ENST00000294117 882 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
PCDH9Q9HC56 FAUP2-201ENST00000394301 401 ntBASIC7.21□□□□□ -1.26
PCDH9Q9HC56 RNU6-233P-201ENST00000410845 141 ntBASIC7.21□□□□□ -1.26
PCDH9Q9HC56 AL157698.1-201ENST00000415190 1011 ntBASIC7.21□□□□□ -1.26
PCDH9Q9HC56 AC010978.1-202ENST00000427050 893 ntTSL 3 BASIC7.21□□□□□ -1.26
PCDH9Q9HC56 MIR181A2HG-201ENST00000429139 662 ntTSL 2 BASIC7.21□□□□□ -1.26
PCDH9Q9HC56 HNRNPA1P57-201ENST00000431359 530 ntTSL 4 BASIC7.21□□□□□ -1.26
PCDH9Q9HC56 AL604028.2-201ENST00000437848 788 ntBASIC7.21□□□□□ -1.26
PCDH9Q9HC56 HGF-206ENST00000444829 1184 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
PCDH9Q9HC56 DLG5-AS1-201ENST00000449852 487 ntTSL 2 BASIC7.21□□□□□ -1.26
PCDH9Q9HC56 PSMA6P2-201ENST00000457574 686 ntBASIC7.21□□□□□ -1.26
PCDH9Q9HC56 NSRP1-205ENST00000479218 540 ntTSL 3 BASIC7.21□□□□□ -1.26
PCDH9Q9HC56 SSR1-206ENST00000479365 1118 ntTSL 5 BASIC7.21□□□□□ -1.26
PCDH9Q9HC56 AC010409.2-201ENST00000505780 478 ntBASIC7.21□□□□□ -1.26
PCDH9Q9HC56 AC055860.1-201ENST00000525523 688 ntTSL 5 BASIC7.21□□□□□ -1.26
PCDH9Q9HC56 NDUFA3P2-201ENST00000531434 232 ntBASIC7.21□□□□□ -1.26
PCDH9Q9HC56 OR7E161P-201ENST00000533722 967 ntBASIC7.21□□□□□ -1.26
PCDH9Q9HC56 OVCH1-AS1-202ENST00000550906 654 ntTSL 3 BASIC7.21□□□□□ -1.26
PCDH9Q9HC56 TRIM69-204ENST00000558329 1211 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
PCDH9Q9HC56 AL031846.1-201ENST00000560933 314 ntBASIC7.21□□□□□ -1.26
PCDH9Q9HC56 AC009119.1-202ENST00000567342 543 ntTSL 4 BASIC7.21□□□□□ -1.26
PCDH9Q9HC56 AC091304.5-201ENST00000568969 158 ntBASIC7.21□□□□□ -1.26
PCDH9Q9HC56 ACTG1P15-201ENST00000570019 1063 ntBASIC7.21□□□□□ -1.26
PCDH9Q9HC56 AC026992.2-201ENST00000570122 766 ntTSL 5 BASIC7.21□□□□□ -1.26
Retrieved 100 of 98,524 protein–RNA pairs in 73.9 ms