Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 AC022469.1-201ENST00000555291 656 ntTSL 3 BASIC7.52□□□□□ -1.21
CDK5RAP1Q96SZ6 TRIM69-204ENST00000558329 1211 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
CDK5RAP1Q96SZ6 AL117336.3-201ENST00000603160 1107 ntTSL 3 BASIC7.52□□□□□ -1.21
CDK5RAP1Q96SZ6 AL078624.2-201ENST00000605063 554 ntBASIC7.52□□□□□ -1.21
CDK5RAP1Q96SZ6 AL355333.1-201ENST00000605632 279 ntBASIC7.52□□□□□ -1.21
CDK5RAP1Q96SZ6 Metazoa_SRP.195-201ENST00000612667 287 ntBASIC7.52□□□□□ -1.21
CDK5RAP1Q96SZ6 GBA3-207ENST00000613293 1233 ntTSL 5 BASIC7.52□□□□□ -1.21
CDK5RAP1Q96SZ6 AC087565.2-201ENST00000637695 952 ntTSL 5 BASIC7.52□□□□□ -1.21
CDK5RAP1Q96SZ6 NPIPB4-203ENST00000415645 3606 ntAPPRIS P1 TSL 5 BASIC7.52□□□□□ -1.21
CDK5RAP1Q96SZ6 LAMA2-205ENST00000617695 9678 ntAPPRIS ALT2 TSL 5 BASIC7.52□□□□□ -1.21
CDK5RAP1Q96SZ6 LAMA2-206ENST00000618192 9687 ntAPPRIS ALT2 TSL 5 BASIC7.52□□□□□ -1.21
CDK5RAP1Q96SZ6 GLRA3-201ENST00000274093 8770 ntAPPRIS P3 TSL 1 (best) BASIC7.52□□□□□ -1.21
CDK5RAP1Q96SZ6 DCX-203ENST00000371993 9231 ntAPPRIS ALT1 TSL 5 BASIC7.52□□□□□ -1.21
CDK5RAP1Q96SZ6 NSUN6-201ENST00000377304 2201 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
CDK5RAP1Q96SZ6 NBPF3-202ENST00000318249 3591 ntAPPRIS P3 TSL 1 (best) BASIC7.52□□□□□ -1.21
CDK5RAP1Q96SZ6 KLRD1-201ENST00000336164 3258 ntAPPRIS P4 TSL 1 (best) BASIC7.52□□□□□ -1.21
CDK5RAP1Q96SZ6 CD46-204ENST00000357714 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC7.52□□□□□ -1.21
CDK5RAP1Q96SZ6 SP140-205ENST00000420434 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC7.52□□□□□ -1.21
CDK5RAP1Q96SZ6 COL6A4P1-202ENST00000487147 4317 ntBASIC7.52□□□□□ -1.21
CDK5RAP1Q96SZ6 DYDC2-201ENST00000256039 1842 ntAPPRIS P3 TSL 2 BASIC7.52□□□□□ -1.21
CDK5RAP1Q96SZ6 AC008555.1-201ENST00000561778 2757 ntBASIC7.52□□□□□ -1.21
CDK5RAP1Q96SZ6 MS4A3-201ENST00000278865 1613 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
CDK5RAP1Q96SZ6 KARSP2-201ENST00000415696 1639 ntBASIC7.52□□□□□ -1.21
CDK5RAP1Q96SZ6 DZANK1-203ENST00000357236 3739 ntAPPRIS ALT2 TSL 5 BASIC7.52□□□□□ -1.21
CDK5RAP1Q96SZ6 BCO2-203ENST00000438022 2598 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
CDK5RAP1Q96SZ6 C9orf57-201ENST00000377024 1502 ntAPPRIS P2 TSL 1 (best) BASIC7.52□□□□□ -1.21
CDK5RAP1Q96SZ6 FMN1-211ENST00000561249 4251 ntAPPRIS ALT2 TSL 5 BASIC7.52□□□□□ -1.21
CDK5RAP1Q96SZ6 EFTUD2-220ENST00000591382 3675 ntAPPRIS P1 TSL 2 BASIC7.51□□□□□ -1.21
CDK5RAP1Q96SZ6 LINC01359-204ENST00000447748 2804 ntTSL 2 BASIC7.51□□□□□ -1.21
CDK5RAP1Q96SZ6 NLRC4-204ENST00000404025 3581 ntAPPRIS P1 TSL 5 BASIC7.51□□□□□ -1.21
CDK5RAP1Q96SZ6 ESRP1-204ENST00000454170 3482 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
CDK5RAP1Q96SZ6 RNF145-205ENST00000518802 2603 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
CDK5RAP1Q96SZ6 IL5RA-204ENST00000418488 5521 ntTSL 5 BASIC7.51□□□□□ -1.21
CDK5RAP1Q96SZ6 ZNF326-203ENST00000370447 9433 ntAPPRIS ALT2 TSL 1 (best) BASIC7.51□□□□□ -1.21
CDK5RAP1Q96SZ6 METTL21EP-202ENST00000605100 2312 ntTSL 2 BASIC7.51□□□□□ -1.21
CDK5RAP1Q96SZ6 RNF14-204ENST00000394519 4173 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
CDK5RAP1Q96SZ6 ZNF880-202ENST00000422689 2230 ntAPPRIS P1 TSL 2 BASIC7.51□□□□□ -1.21
CDK5RAP1Q96SZ6 AL359263.1-201ENST00000441188 2796 ntBASIC7.51□□□□□ -1.21
CDK5RAP1Q96SZ6 RNF217-AS1-201ENST00000439075 4507 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
CDK5RAP1Q96SZ6 ADAM2-201ENST00000265708 2672 ntAPPRIS P3 TSL 1 (best) BASIC7.51□□□□□ -1.21
CDK5RAP1Q96SZ6 LINC00536-201ENST00000505156 2692 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
CDK5RAP1Q96SZ6 BANF2-201ENST00000246090 595 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
CDK5RAP1Q96SZ6 SAMD13-204ENST00000370671 724 ntTSL 3 BASIC7.51□□□□□ -1.21
CDK5RAP1Q96SZ6 MIR27A-201ENST00000385073 78 ntBASIC7.51□□□□□ -1.21
CDK5RAP1Q96SZ6 MIR431-201ENST00000385266 114 ntBASIC7.51□□□□□ -1.21
CDK5RAP1Q96SZ6 TRBV25-1-202ENST00000390398 381 ntAPPRIS P1 BASIC7.51□□□□□ -1.21
CDK5RAP1Q96SZ6 RNA5SP35-201ENST00000391257 129 ntBASIC7.51□□□□□ -1.21
CDK5RAP1Q96SZ6 OR2H1-204ENST00000396792 1294 ntAPPRIS P1 BASIC7.51□□□□□ -1.21
CDK5RAP1Q96SZ6 RPL31-202ENST00000409000 641 ntTSL 2 BASIC7.51□□□□□ -1.21
CDK5RAP1Q96SZ6 AC106870.2-201ENST00000421411 691 ntTSL 3 BASIC7.51□□□□□ -1.21
CDK5RAP1Q96SZ6 LIX1L-AS1-203ENST00000421764 287 ntTSL 2 BASIC7.51□□□□□ -1.21
CDK5RAP1Q96SZ6 AC134879.1-201ENST00000426062 394 ntBASIC7.51□□□□□ -1.21
CDK5RAP1Q96SZ6 AL365204.2-201ENST00000446754 687 ntTSL 2 BASIC7.51□□□□□ -1.21
CDK5RAP1Q96SZ6 LINC01839-201ENST00000451348 727 ntTSL 3 BASIC7.51□□□□□ -1.21
CDK5RAP1Q96SZ6 AL513343.1-201ENST00000451818 792 ntBASIC7.51□□□□□ -1.21
CDK5RAP1Q96SZ6 WBP1LP1-201ENST00000460451 896 ntBASIC7.51□□□□□ -1.21
CDK5RAP1Q96SZ6 RN7SL456P-201ENST00000469290 295 ntBASIC7.51□□□□□ -1.21
CDK5RAP1Q96SZ6 AC113404.1-201ENST00000502589 756 ntTSL 5 BASIC7.51□□□□□ -1.21
CDK5RAP1Q96SZ6 AC021151.1-201ENST00000506933 183 ntTSL 3 BASIC7.51□□□□□ -1.21
CDK5RAP1Q96SZ6 TPT1P8-201ENST00000510120 555 ntBASIC7.51□□□□□ -1.21
CDK5RAP1Q96SZ6 AC093763.1-201ENST00000512464 699 ntTSL 3 BASIC7.51□□□□□ -1.21
CDK5RAP1Q96SZ6 RPS23-208ENST00000512493 443 ntTSL 3 BASIC7.51□□□□□ -1.21
CDK5RAP1Q96SZ6 AC113423.2-201ENST00000517582 545 ntTSL 2 BASIC7.51□□□□□ -1.21
CDK5RAP1Q96SZ6 AC023080.1-201ENST00000551663 931 ntBASIC7.51□□□□□ -1.21
CDK5RAP1Q96SZ6 LINC02156-201ENST00000552320 483 ntTSL 2 BASIC7.51□□□□□ -1.21
CDK5RAP1Q96SZ6 ETFRF1-211ENST00000557540 1259 ntAPPRIS ALT1 TSL 2 BASIC7.51□□□□□ -1.21
CDK5RAP1Q96SZ6 AC116158.2-201ENST00000559544 553 ntTSL 4 BASIC7.51□□□□□ -1.21
CDK5RAP1Q96SZ6 NQO1-205ENST00000561500 891 ntTSL 3 BASIC7.51□□□□□ -1.21
CDK5RAP1Q96SZ6 AC126323.4-201ENST00000566935 234 ntBASIC7.51□□□□□ -1.21
CDK5RAP1Q96SZ6 AC016229.2-201ENST00000591331 417 ntTSL 2 BASIC7.51□□□□□ -1.21
CDK5RAP1Q96SZ6 AC245884.10-201ENST00000597355 337 ntBASIC7.51□□□□□ -1.21
CDK5RAP1Q96SZ6 BNIP3P27-201ENST00000599991 412 ntBASIC7.51□□□□□ -1.21
CDK5RAP1Q96SZ6 AP005131.7-201ENST00000610087 611 ntBASIC7.51□□□□□ -1.21
CDK5RAP1Q96SZ6 AL050303.3-201ENST00000613704 284 ntBASIC7.51□□□□□ -1.21
CDK5RAP1Q96SZ6 AC243571.1-201ENST00000615743 478 ntTSL 3 BASIC7.51□□□□□ -1.21
CDK5RAP1Q96SZ6 AMYH02020865.1-207ENST00000617096 458 ntTSL 3 BASIC7.51□□□□□ -1.21
CDK5RAP1Q96SZ6 AL121985.3-201ENST00000620690 523 ntBASIC7.51□□□□□ -1.21
CDK5RAP1Q96SZ6 AL049536.1-202ENST00000623572 455 ntTSL 5 BASIC7.51□□□□□ -1.21
CDK5RAP1Q96SZ6 AC021766.1-201ENST00000624404 741 ntBASIC7.51□□□□□ -1.21
CDK5RAP1Q96SZ6 KIAA0586-201ENST00000261244 4807 ntAPPRIS P3 TSL 1 (best) BASIC7.51□□□□□ -1.21
CDK5RAP1Q96SZ6 RND3-201ENST00000263895 2711 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
CDK5RAP1Q96SZ6 ZFP42-203ENST00000618147 2338 ntAPPRIS P1 BASIC7.51□□□□□ -1.21
CDK5RAP1Q96SZ6 FBXW7-203ENST00000296555 3572 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
CDK5RAP1Q96SZ6 PDZK1P1-201ENST00000401008 3498 ntTSL 2 BASIC7.51□□□□□ -1.21
CDK5RAP1Q96SZ6 NR1I3-202ENST00000367980 1403 ntTSL 5 BASIC7.51□□□□□ -1.21
CDK5RAP1Q96SZ6 LAMB4-201ENST00000205386 5857 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
CDK5RAP1Q96SZ6 ECT2-201ENST00000232458 4087 ntAPPRIS P2 TSL 1 (best) BASIC7.51□□□□□ -1.21
CDK5RAP1Q96SZ6 LINC02070-201ENST00000460586 1321 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
CDK5RAP1Q96SZ6 ERBIN-205ENST00000416865 2351 ntTSL 2 BASIC7.51□□□□□ -1.21
CDK5RAP1Q96SZ6 TCF12-205ENST00000537840 1598 ntTSL 2 BASIC7.5□□□□□ -1.21
CDK5RAP1Q96SZ6 UMAD1-206ENST00000636849 2157 ntAPPRIS P1 TSL 5 BASIC7.5□□□□□ -1.21
CDK5RAP1Q96SZ6 SPRY1-201ENST00000339241 2348 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
CDK5RAP1Q96SZ6 PSMD5-AS1-213ENST00000640327 3531 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
CDK5RAP1Q96SZ6 NDFIP2-203ENST00000487865 1384 ntTSL 2 BASIC7.5□□□□□ -1.21
CDK5RAP1Q96SZ6 EEF1A1P20-201ENST00000514852 1386 ntBASIC7.5□□□□□ -1.21
CDK5RAP1Q96SZ6 NXT2-203ENST00000372106 2562 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
CDK5RAP1Q96SZ6 EZH2-203ENST00000460911 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC7.5□□□□□ -1.21
CDK5RAP1Q96SZ6 TP63-207ENST00000418709 2810 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
CDK5RAP1Q96SZ6 AC092828.1-201ENST00000501211 5391 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
CDK5RAP1Q96SZ6 CSN2-201ENST00000353151 1066 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
Retrieved 100 of 98,524 protein–RNA pairs in 102 ms