Protein–RNA interactions for Protein: Q8IVM0

CCDC50, Coiled-coil domain-containing protein 50, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50Q8IVM0 AC007785.3-202ENST00000601033 518 ntTSL 3 BASIC7.42□□□□□ -1.22
CCDC50Q8IVM0 AC007262.1-201ENST00000604099 321 ntBASIC7.42□□□□□ -1.22
CCDC50Q8IVM0 LRMDA-216ENST00000611306 393 ntAPPRIS ALT2 TSL 5 BASIC7.42□□□□□ -1.22
CCDC50Q8IVM0 CU638689.4-205ENST00000623313 596 ntTSL 4 BASIC7.42□□□□□ -1.22
CCDC50Q8IVM0 AC211433.3-201ENST00000623770 375 ntBASIC7.42□□□□□ -1.22
CCDC50Q8IVM0 AC002094.5-201ENST00000623773 629 ntBASIC7.42□□□□□ -1.22
CCDC50Q8IVM0 HERC4-211ENST00000492996 3385 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
CCDC50Q8IVM0 NDUFS1-205ENST00000449699 2371 ntAPPRIS P1 TSL 2 BASIC7.42□□□□□ -1.22
CCDC50Q8IVM0 ZNF121-202ENST00000586602 7177 ntAPPRIS P1 TSL 2 BASIC7.42□□□□□ -1.22
CCDC50Q8IVM0 RNF14-203ENST00000394514 2905 ntTSL 2 BASIC7.42□□□□□ -1.22
CCDC50Q8IVM0 PMFBP1-201ENST00000237353 3527 ntAPPRIS P2 TSL 1 (best) BASIC7.42□□□□□ -1.22
CCDC50Q8IVM0 CAMK2D-202ENST00000342666 1940 ntTSL 5 BASIC7.42□□□□□ -1.22
CCDC50Q8IVM0 AL390726.6-202ENST00000635962 1365 ntTSL 5 BASIC7.42□□□□□ -1.22
CCDC50Q8IVM0 LYSMD3-201ENST00000315948 4259 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
CCDC50Q8IVM0 RNF145-211ENST00000521606 2658 ntTSL 2 BASIC7.42□□□□□ -1.22
CCDC50Q8IVM0 NAV3-201ENST00000397909 9821 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
CCDC50Q8IVM0 AL355306.2-201ENST00000635570 1542 ntTSL 5 BASIC7.42□□□□□ -1.22
CCDC50Q8IVM0 APOL6-201ENST00000409652 10121 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
CCDC50Q8IVM0 IL20-202ENST00000367098 1553 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
CCDC50Q8IVM0 PSMC6-218ENST00000606149 1560 ntAPPRIS ALT1 TSL 1 (best) BASIC7.42□□□□□ -1.22
CCDC50Q8IVM0 AP000641.1-201ENST00000531988 1639 ntBASIC7.41□□□□□ -1.22
CCDC50Q8IVM0 THRB-203ENST00000396671 7506 ntAPPRIS P2 TSL 5 BASIC7.41□□□□□ -1.22
CCDC50Q8IVM0 HECTD4-211ENST00000550722 15450 ntAPPRIS ALT2 TSL 5 BASIC7.41□□□□□ -1.22
CCDC50Q8IVM0 ZNF329-203ENST00000597186 3930 ntAPPRIS P1 TSL 5 BASIC7.41□□□□□ -1.22
CCDC50Q8IVM0 AP000547.3-204ENST00000588548 2523 ntBASIC7.41□□□□□ -1.22
CCDC50Q8IVM0 BROX-201ENST00000340934 4124 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
CCDC50Q8IVM0 CASP10-205ENST00000360132 5814 ntTSL 5 BASIC7.41□□□□□ -1.22
CCDC50Q8IVM0 IARS-205ENST00000443024 4341 ntTSL 5 BASIC7.41□□□□□ -1.22
CCDC50Q8IVM0 MCM10-201ENST00000378694 4587 ntTSL 5 BASIC7.41□□□□□ -1.22
CCDC50Q8IVM0 RPL10P16-201ENST00000325000 645 ntBASIC7.41□□□□□ -1.22
CCDC50Q8IVM0 RNA5SP472-201ENST00000363868 119 ntBASIC7.41□□□□□ -1.22
CCDC50Q8IVM0 FAM204BP-201ENST00000369171 701 ntBASIC7.41□□□□□ -1.22
CCDC50Q8IVM0 C21orf140-201ENST00000410005 756 ntAPPRIS P1 BASIC7.41□□□□□ -1.22
CCDC50Q8IVM0 AL034345.2-202ENST00000416948 830 ntTSL 2 BASIC7.41□□□□□ -1.22
CCDC50Q8IVM0 AC017104.2-201ENST00000417000 321 ntBASIC7.41□□□□□ -1.22
CCDC50Q8IVM0 OR5P4P-201ENST00000424698 917 ntBASIC7.41□□□□□ -1.22
CCDC50Q8IVM0 LINC01980-202ENST00000425195 491 ntTSL 3 BASIC7.41□□□□□ -1.22
CCDC50Q8IVM0 RPSAP7-201ENST00000456871 885 ntBASIC7.41□□□□□ -1.22
CCDC50Q8IVM0 AC016489.1-201ENST00000461109 375 ntBASIC7.41□□□□□ -1.22
CCDC50Q8IVM0 FOXP1-AS1-201ENST00000465742 700 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
CCDC50Q8IVM0 RN7SL282P-201ENST00000479676 297 ntBASIC7.41□□□□□ -1.22
CCDC50Q8IVM0 AC026826.1-201ENST00000493002 361 ntBASIC7.41□□□□□ -1.22
CCDC50Q8IVM0 AC025188.1-201ENST00000507514 600 ntTSL 3 BASIC7.41□□□□□ -1.22
CCDC50Q8IVM0 AC034206.1-201ENST00000509372 474 ntTSL 3 BASIC7.41□□□□□ -1.22
CCDC50Q8IVM0 AC008417.1-201ENST00000510014 565 ntBASIC7.41□□□□□ -1.22
CCDC50Q8IVM0 AC114947.1-201ENST00000511991 432 ntTSL 2 BASIC7.41□□□□□ -1.22
CCDC50Q8IVM0 RPS23-208ENST00000512493 443 ntTSL 3 BASIC7.41□□□□□ -1.22
CCDC50Q8IVM0 AC106800.2-201ENST00000514009 1103 ntBASIC7.41□□□□□ -1.22
CCDC50Q8IVM0 SUMO2P19-201ENST00000518920 295 ntBASIC7.41□□□□□ -1.22
CCDC50Q8IVM0 HPS5-207ENST00000537258 1275 ntTSL 5 BASIC7.41□□□□□ -1.22
CCDC50Q8IVM0 ORMDL2-203ENST00000548974 671 ntAPPRIS P1 TSL 2 BASIC7.41□□□□□ -1.22
CCDC50Q8IVM0 COX6CP11-201ENST00000555293 229 ntBASIC7.41□□□□□ -1.22
CCDC50Q8IVM0 NDUFA3P4-201ENST00000560814 250 ntBASIC7.41□□□□□ -1.22
CCDC50Q8IVM0 AP001554.1-201ENST00000604533 376 ntBASIC7.41□□□□□ -1.22
CCDC50Q8IVM0 AC010320.5-201ENST00000619124 676 ntBASIC7.41□□□□□ -1.22
CCDC50Q8IVM0 ZSCAN12-202ENST00000396827 3909 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
CCDC50Q8IVM0 LRMP-204ENST00000547044 2208 ntAPPRIS P2 TSL 1 (best) BASIC7.41□□□□□ -1.22
CCDC50Q8IVM0 SNX25-202ENST00000504273 3323 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
CCDC50Q8IVM0 ENPP3-203ENST00000414305 3418 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
CCDC50Q8IVM0 SPHKAP-201ENST00000344657 6804 ntAPPRIS P3 TSL 1 (best) BASIC7.41□□□□□ -1.22
CCDC50Q8IVM0 CACNB4-229ENST00000636617 5757 ntTSL 5 BASIC7.41□□□□□ -1.22
CCDC50Q8IVM0 IL31RA-201ENST00000297015 2695 ntAPPRIS ALT2 TSL 5 BASIC7.41□□□□□ -1.22
CCDC50Q8IVM0 VPS8-201ENST00000287546 5047 ntAPPRIS ALT1 TSL 1 (best) BASIC7.41□□□□□ -1.22
CCDC50Q8IVM0 GFPT1-202ENST00000361060 8632 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
CCDC50Q8IVM0 IL5RA-201ENST00000256452 2001 ntAPPRIS P4 TSL 1 (best) BASIC7.4□□□□□ -1.22
CCDC50Q8IVM0 ZNF790-206ENST00000613249 2183 ntAPPRIS P1 TSL 4 BASIC7.4□□□□□ -1.22
CCDC50Q8IVM0 AP000688.2-201ENST00000422473 2336 ntTSL 2 BASIC7.4□□□□□ -1.22
CCDC50Q8IVM0 NDFIP2-206ENST00000620924 2324 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
CCDC50Q8IVM0 VTCN1-202ENST00000359008 2581 ntAPPRIS ALT2 TSL 5 BASIC7.4□□□□□ -1.22
CCDC50Q8IVM0 MTHFD1P1-201ENST00000413059 2764 ntBASIC7.4□□□□□ -1.22
CCDC50Q8IVM0 LRRC37B-220ENST00000584368 2773 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
CCDC50Q8IVM0 ABI1-207ENST00000376142 3576 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
CCDC50Q8IVM0 ZNF33B-201ENST00000359467 5958 ntAPPRIS P2 TSL 1 (best) BASIC7.4□□□□□ -1.22
CCDC50Q8IVM0 AL138847.1-201ENST00000258651 546 ntBASIC7.4□□□□□ -1.22
CCDC50Q8IVM0 RNA5SP301-201ENST00000362537 121 ntBASIC7.4□□□□□ -1.22
CCDC50Q8IVM0 RN7SKP107-201ENST00000364157 290 ntBASIC7.4□□□□□ -1.22
CCDC50Q8IVM0 NOX4-203ENST00000375979 816 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
CCDC50Q8IVM0 ALDH1A1-202ENST00000376939 822 ntTSL 5 BASIC7.4□□□□□ -1.22
CCDC50Q8IVM0 AL031005.1-201ENST00000416959 723 ntTSL 3 BASIC7.4□□□□□ -1.22
CCDC50Q8IVM0 AC015987.1-201ENST00000419211 804 ntTSL 2 BASIC7.4□□□□□ -1.22
CCDC50Q8IVM0 CD33-203ENST00000421133 1023 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
CCDC50Q8IVM0 LMLN-AS1-201ENST00000423460 542 ntTSL 5 BASIC7.4□□□□□ -1.22
CCDC50Q8IVM0 GRM7-AS2-201ENST00000427748 520 ntTSL 2 BASIC7.4□□□□□ -1.22
CCDC50Q8IVM0 CBWD5-209ENST00000430059 1242 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
CCDC50Q8IVM0 AL604028.1-201ENST00000430643 598 ntTSL 2 BASIC7.4□□□□□ -1.22
CCDC50Q8IVM0 HMGN1P6-201ENST00000438508 291 ntBASIC7.4□□□□□ -1.22
CCDC50Q8IVM0 SDHCP3-201ENST00000445371 506 ntBASIC7.4□□□□□ -1.22
CCDC50Q8IVM0 RPL7P14-201ENST00000449851 741 ntBASIC7.4□□□□□ -1.22
CCDC50Q8IVM0 LINC02556-201ENST00000450776 346 ntTSL 3 BASIC7.4□□□□□ -1.22
CCDC50Q8IVM0 AC115223.1-201ENST00000466377 870 ntBASIC7.4□□□□□ -1.22
CCDC50Q8IVM0 AL138787.2-201ENST00000466576 367 ntTSL 3 BASIC7.4□□□□□ -1.22
CCDC50Q8IVM0 LINC00881-201ENST00000467995 589 ntTSL 4 BASIC7.4□□□□□ -1.22
CCDC50Q8IVM0 RPL7AP56-201ENST00000476420 791 ntBASIC7.4□□□□□ -1.22
CCDC50Q8IVM0 AP005202.1-201ENST00000489915 867 ntBASIC7.4□□□□□ -1.22
CCDC50Q8IVM0 CLDND1-205ENST00000502288 560 ntTSL 4 BASIC7.4□□□□□ -1.22
CCDC50Q8IVM0 AC117473.1-201ENST00000508616 392 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
CCDC50Q8IVM0 GLYATL1P4-201ENST00000529326 906 ntBASIC7.4□□□□□ -1.22
CCDC50Q8IVM0 ATP5J2P4-201ENST00000538774 267 ntBASIC7.4□□□□□ -1.22
CCDC50Q8IVM0 RNASE11-206ENST00000553849 1101 ntAPPRIS P2 TSL 1 (best) BASIC7.4□□□□□ -1.22
CCDC50Q8IVM0 MIR5095-201ENST00000578844 88 ntBASIC7.4□□□□□ -1.22
Retrieved 100 of 98,524 protein–RNA pairs in 85.9 ms