Protein–RNA interactions for Protein: Q6VVB1

NHLRC1, E3 ubiquitin-protein ligase NHLRC1, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC1Q6VVB1 TPT1-AS1-213ENST00000521336 759 ntTSL 5 BASIC6.37□□□□□ -1.39
NHLRC1Q6VVB1 GLYATL1P4-201ENST00000529326 906 ntBASIC6.37□□□□□ -1.39
NHLRC1Q6VVB1 VDAC2P2-201ENST00000544463 901 ntBASIC6.37□□□□□ -1.39
NHLRC1Q6VVB1 AL049869.4-201ENST00000555669 178 ntBASIC6.37□□□□□ -1.39
NHLRC1Q6VVB1 PEX11A-205ENST00000561257 978 ntTSL 2 BASIC6.37□□□□□ -1.39
NHLRC1Q6VVB1 AC006120.1-201ENST00000579375 546 ntBASIC6.37□□□□□ -1.39
NHLRC1Q6VVB1 AC005323.1-203ENST00000585303 566 ntTSL 5 BASIC6.37□□□□□ -1.39
NHLRC1Q6VVB1 AC024451.4-201ENST00000602578 752 ntBASIC6.37□□□□□ -1.39
NHLRC1Q6VVB1 AC018690.1-201ENST00000608144 626 ntBASIC6.37□□□□□ -1.39
NHLRC1Q6VVB1 IFNA5-201ENST00000610521 987 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
NHLRC1Q6VVB1 LRMDA-216ENST00000611306 393 ntAPPRIS ALT2 TSL 5 BASIC6.37□□□□□ -1.39
NHLRC1Q6VVB1 LINC01427-203ENST00000635277 781 ntTSL 5 BASIC6.37□□□□□ -1.39
NHLRC1Q6VVB1 GOSR2-222ENST00000639031 885 ntTSL 3 BASIC6.37□□□□□ -1.39
NHLRC1Q6VVB1 LINC01087-201ENST00000431979 3516 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
NHLRC1Q6VVB1 EZH1-202ENST00000428826 4623 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
NHLRC1Q6VVB1 MEF2C-226ENST00000625674 4343 ntAPPRIS P3 TSL 5 BASIC6.37□□□□□ -1.39
NHLRC1Q6VVB1 ODF2L-201ENST00000294678 4267 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
NHLRC1Q6VVB1 NADK2-201ENST00000282512 2507 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
NHLRC1Q6VVB1 KLHL2-202ENST00000421009 2452 ntTSL 5 BASIC6.37□□□□□ -1.39
NHLRC1Q6VVB1 CDH18-205ENST00000506372 2432 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
NHLRC1Q6VVB1 MME-203ENST00000460393 5622 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
NHLRC1Q6VVB1 ATP5S-202ENST00000311459 10212 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
NHLRC1Q6VVB1 INHBA-AS1-203ENST00000422822 2312 ntTSL 2 BASIC6.37□□□□□ -1.39
NHLRC1Q6VVB1 ASCC1-203ENST00000342444 2270 ntTSL 2 BASIC6.37□□□□□ -1.39
NHLRC1Q6VVB1 DDX1-208ENST00000621973 2183 ntTSL 5 BASIC6.37□□□□□ -1.39
NHLRC1Q6VVB1 MAMDC2-AS1-202ENST00000414515 2097 ntTSL 5 BASIC6.37□□□□□ -1.39
NHLRC1Q6VVB1 KIAA1549L-202ENST00000321505 11678 ntAPPRIS P2 TSL 1 (best) BASIC6.36□□□□□ -1.39
NHLRC1Q6VVB1 BMPR1B-201ENST00000264568 1807 ntAPPRIS P1 TSL 2 BASIC6.36□□□□□ -1.39
NHLRC1Q6VVB1 LINC00907-205ENST00000589068 1812 ntTSL 2 BASIC6.36□□□□□ -1.39
NHLRC1Q6VVB1 CAST-203ENST00000338252 2972 ntAPPRIS ALT2 TSL 1 (best) BASIC6.36□□□□□ -1.39
NHLRC1Q6VVB1 ZNF793-207ENST00000587986 3869 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
NHLRC1Q6VVB1 PDE4DIP-204ENST00000369351 4922 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
NHLRC1Q6VVB1 AC079178.2-201ENST00000439323 1624 ntBASIC6.36□□□□□ -1.39
NHLRC1Q6VVB1 KCNMB2-202ENST00000420517 1563 ntAPPRIS P1 TSL 5 BASIC6.36□□□□□ -1.39
NHLRC1Q6VVB1 CDH17-203ENST00000450165 2625 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
NHLRC1Q6VVB1 ASNS-214ENST00000455086 1588 ntTSL 2 BASIC6.36□□□□□ -1.39
NHLRC1Q6VVB1 AC022507.1-201ENST00000548349 1505 ntBASIC6.36□□□□□ -1.39
NHLRC1Q6VVB1 NEXMIF-203ENST00000616200 10624 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
NHLRC1Q6VVB1 ZBTB25-204ENST00000608382 10372 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
NHLRC1Q6VVB1 AL356361.1-201ENST00000400943 1459 ntBASIC6.36□□□□□ -1.39
NHLRC1Q6VVB1 DICER1-201ENST00000343455 10277 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
NHLRC1Q6VVB1 CSDE1-218ENST00000610726 4312 ntTSL 5 BASIC6.36□□□□□ -1.39
NHLRC1Q6VVB1 STK4-207ENST00000499879 6161 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
NHLRC1Q6VVB1 FOXJ3-209ENST00000545068 5165 ntAPPRIS P3 TSL 5 BASIC6.36□□□□□ -1.39
NHLRC1Q6VVB1 AC132219.2-201ENST00000624416 2327 ntBASIC6.36□□□□□ -1.39
NHLRC1Q6VVB1 GOLGA6L22-204ENST00000622895 4178 ntAPPRIS P5 TSL 5 BASIC6.36□□□□□ -1.39
NHLRC1Q6VVB1 EEF1A1P20-201ENST00000514852 1386 ntBASIC6.36□□□□□ -1.39
NHLRC1Q6VVB1 LDHA-206ENST00000430553 1310 ntTSL 2 BASIC6.36□□□□□ -1.39
NHLRC1Q6VVB1 TXNRD1-205ENST00000503506 3930 ntAPPRIS P2 TSL 1 (best) BASIC6.36□□□□□ -1.39
NHLRC1Q6VVB1 CPB2-AS1-202ENST00000606243 2185 ntTSL 2 BASIC6.36□□□□□ -1.39
NHLRC1Q6VVB1 APOOL-202ENST00000613473 6445 ntAPPRIS ALT1 TSL 5 BASIC6.36□□□□□ -1.39
NHLRC1Q6VVB1 OR5B17-201ENST00000357377 946 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
NHLRC1Q6VVB1 RNA5SP472-201ENST00000363868 119 ntBASIC6.36□□□□□ -1.39
NHLRC1Q6VVB1 HSPB11-202ENST00000371376 765 ntTSL 3 BASIC6.36□□□□□ -1.39
NHLRC1Q6VVB1 AC023469.1-201ENST00000409243 469 ntTSL 3 BASIC6.36□□□□□ -1.39
NHLRC1Q6VVB1 RN7SKP39-201ENST00000410773 322 ntBASIC6.36□□□□□ -1.39
NHLRC1Q6VVB1 AL773545.3-201ENST00000414297 706 ntBASIC6.36□□□□□ -1.39
NHLRC1Q6VVB1 AC118470.1-201ENST00000419891 453 ntAPPRIS P1 TSL 3 BASIC6.36□□□□□ -1.39
NHLRC1Q6VVB1 CYP4F32P-201ENST00000426492 504 ntBASIC6.36□□□□□ -1.39
NHLRC1Q6VVB1 HNRNPA1P57-201ENST00000431359 530 ntTSL 4 BASIC6.36□□□□□ -1.39
NHLRC1Q6VVB1 MYO5BP3-201ENST00000431872 1279 ntBASIC6.36□□□□□ -1.39
NHLRC1Q6VVB1 GAS5-211ENST00000432536 959 ntTSL 2 BASIC6.36□□□□□ -1.39
NHLRC1Q6VVB1 BACH1-IT2-201ENST00000436529 806 ntTSL 5 BASIC6.36□□□□□ -1.39
NHLRC1Q6VVB1 GK-IT1-201ENST00000441146 397 ntTSL 5 BASIC6.36□□□□□ -1.39
NHLRC1Q6VVB1 AL161626.1-201ENST00000441480 490 ntBASIC6.36□□□□□ -1.39
NHLRC1Q6VVB1 AC019080.2-201ENST00000453859 394 ntBASIC6.36□□□□□ -1.39
NHLRC1Q6VVB1 AC090589.1-201ENST00000473109 362 ntBASIC6.36□□□□□ -1.39
NHLRC1Q6VVB1 AC131233.1-201ENST00000479200 955 ntBASIC6.36□□□□□ -1.39
NHLRC1Q6VVB1 AC079594.1-201ENST00000489757 331 ntBASIC6.36□□□□□ -1.39
NHLRC1Q6VVB1 GLYCTK-AS1-203ENST00000493616 445 ntTSL 3 BASIC6.36□□□□□ -1.39
NHLRC1Q6VVB1 AC110772.1-201ENST00000503037 474 ntTSL 3 BASIC6.36□□□□□ -1.39
NHLRC1Q6VVB1 AC027315.1-201ENST00000511592 469 ntTSL 3 BASIC6.36□□□□□ -1.39
NHLRC1Q6VVB1 AP003084.1-201ENST00000524828 742 ntBASIC6.36□□□□□ -1.39
NHLRC1Q6VVB1 CRYAB-207ENST00000527950 887 ntAPPRIS P1 TSL 5 BASIC6.36□□□□□ -1.39
NHLRC1Q6VVB1 AP003555.2-201ENST00000528507 655 ntTSL 3 BASIC6.36□□□□□ -1.39
NHLRC1Q6VVB1 AL161747.2-201ENST00000535893 472 ntTSL 5 BASIC6.36□□□□□ -1.39
NHLRC1Q6VVB1 LYZ-202ENST00000548839 558 ntTSL 2 BASIC6.36□□□□□ -1.39
NHLRC1Q6VVB1 LINC02457-201ENST00000552992 596 ntTSL 4 BASIC6.36□□□□□ -1.39
NHLRC1Q6VVB1 FXNP1-201ENST00000555153 337 ntBASIC6.36□□□□□ -1.39
NHLRC1Q6VVB1 AC022898.1-202ENST00000560864 806 ntTSL 2 BASIC6.36□□□□□ -1.39
NHLRC1Q6VVB1 AC090970.1-201ENST00000561207 381 ntTSL 5 BASIC6.36□□□□□ -1.39
NHLRC1Q6VVB1 AC244034.2-201ENST00000562504 509 ntBASIC6.36□□□□□ -1.39
NHLRC1Q6VVB1 AC004494.1-202ENST00000573820 480 ntTSL 4 BASIC6.36□□□□□ -1.39
NHLRC1Q6VVB1 AC061975.3-201ENST00000583209 244 ntBASIC6.36□□□□□ -1.39
NHLRC1Q6VVB1 AC011447.3-202ENST00000593655 555 ntTSL 4 BASIC6.36□□□□□ -1.39
NHLRC1Q6VVB1 PLEKHA3P1-201ENST00000598554 894 ntBASIC6.36□□□□□ -1.39
NHLRC1Q6VVB1 ELMO2P1-201ENST00000611569 473 ntTSL 5 BASIC6.36□□□□□ -1.39
NHLRC1Q6VVB1 NBPF25P-202ENST00000619932 3827 ntTSL 2 BASIC6.36□□□□□ -1.39
NHLRC1Q6VVB1 AC078909.2-201ENST00000620584 398 ntBASIC6.36□□□□□ -1.39
NHLRC1Q6VVB1 PFKM-232ENST00000629846 381 ntTSL 4 BASIC6.36□□□□□ -1.39
NHLRC1Q6VVB1 DTHD1-206ENST00000639862 3819 ntTSL 5 BASIC6.36□□□□□ -1.39
NHLRC1Q6VVB1 AL358394.2-201ENST00000427229 3637 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
NHLRC1Q6VVB1 CR1-204ENST00000367052 7469 ntTSL 5 BASIC6.36□□□□□ -1.39
NHLRC1Q6VVB1 CR1-205ENST00000367053 7469 ntTSL 5 BASIC6.36□□□□□ -1.39
NHLRC1Q6VVB1 CYB5B-201ENST00000307892 4286 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
NHLRC1Q6VVB1 ARL14EPL-201ENST00000601302 1914 ntAPPRIS P1 TSL 5 BASIC6.36□□□□□ -1.39
NHLRC1Q6VVB1 FBLN5-205ENST00000556154 1875 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
NHLRC1Q6VVB1 AC007731.1-202ENST00000610338 1870 ntTSL 5 BASIC6.36□□□□□ -1.39
NHLRC1Q6VVB1 TAT-201ENST00000355962 3983 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
NHLRC1Q6VVB1 RAPGEF4-214ENST00000538974 3920 ntTSL 2 BASIC6.36□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 105.5 ms