Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 RBMY2DP-202ENST00000448881 1157 ntBASIC6.48□□□□□ -1.37
NPIPA3F8WFD2 PPIAP32-201ENST00000449940 472 ntBASIC6.48□□□□□ -1.37
NPIPA3F8WFD2 AL157896.1-201ENST00000451617 790 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
NPIPA3F8WFD2 ETDA-202ENST00000454551 388 ntAPPRIS P1 TSL 3 BASIC6.48□□□□□ -1.37
NPIPA3F8WFD2 RPSAP24-201ENST00000461543 873 ntBASIC6.48□□□□□ -1.37
NPIPA3F8WFD2 AC126615.1-201ENST00000470084 630 ntBASIC6.48□□□□□ -1.37
NPIPA3F8WFD2 RN7SL267P-201ENST00000485107 261 ntBASIC6.48□□□□□ -1.37
NPIPA3F8WFD2 RN7SL868P-201ENST00000485915 303 ntBASIC6.48□□□□□ -1.37
NPIPA3F8WFD2 AL591122.1-201ENST00000487348 492 ntBASIC6.48□□□□□ -1.37
NPIPA3F8WFD2 RN7SL306P-201ENST00000492941 296 ntBASIC6.48□□□□□ -1.37
NPIPA3F8WFD2 RN7SL569P-201ENST00000494652 288 ntBASIC6.48□□□□□ -1.37
NPIPA3F8WFD2 RN7SL775P-201ENST00000498361 336 ntBASIC6.48□□□□□ -1.37
NPIPA3F8WFD2 AL135933.1-201ENST00000498657 802 ntBASIC6.48□□□□□ -1.37
NPIPA3F8WFD2 AC117473.1-201ENST00000508616 392 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
NPIPA3F8WFD2 AC113191.1-201ENST00000517759 403 ntBASIC6.48□□□□□ -1.37
NPIPA3F8WFD2 ST13P6-201ENST00000522430 1102 ntBASIC6.48□□□□□ -1.37
NPIPA3F8WFD2 AC013546.1-201ENST00000523232 564 ntTSL 4 BASIC6.48□□□□□ -1.37
NPIPA3F8WFD2 SAA3P-201ENST00000533267 365 ntBASIC6.48□□□□□ -1.37
NPIPA3F8WFD2 AL138974.1-201ENST00000551227 741 ntTSL 5 BASIC6.48□□□□□ -1.37
NPIPA3F8WFD2 HNRNPA1P71-201ENST00000559135 950 ntBASIC6.48□□□□□ -1.37
NPIPA3F8WFD2 AC108097.1-201ENST00000568275 534 ntTSL 4 BASIC6.48□□□□□ -1.37
NPIPA3F8WFD2 AC027801.5-201ENST00000574365 416 ntTSL 3 BASIC6.48□□□□□ -1.37
NPIPA3F8WFD2 AC006441.4-202ENST00000577621 510 ntTSL 3 BASIC6.48□□□□□ -1.37
NPIPA3F8WFD2 CBLN2-203ENST00000581073 537 ntTSL 4 BASIC6.48□□□□□ -1.37
NPIPA3F8WFD2 C10orf82-203ENST00000588184 852 ntAPPRIS ALT2 TSL 3 BASIC6.48□□□□□ -1.37
NPIPA3F8WFD2 AC068802.1-201ENST00000603420 732 ntBASIC6.48□□□□□ -1.37
NPIPA3F8WFD2 AC048341.3-201ENST00000619323 491 ntBASIC6.48□□□□□ -1.37
NPIPA3F8WFD2 LINC01440-208ENST00000627300 699 ntTSL 5 BASIC6.48□□□□□ -1.37
NPIPA3F8WFD2 TPD52-203ENST00000448733 4339 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
NPIPA3F8WFD2 NRCAM-205ENST00000413765 6406 ntTSL 2 BASIC6.48□□□□□ -1.37
NPIPA3F8WFD2 LINC00184-201ENST00000429269 2270 ntTSL 2 BASIC6.48□□□□□ -1.37
NPIPA3F8WFD2 NOX1-204ENST00000372966 2529 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
NPIPA3F8WFD2 SLC25A40-201ENST00000341119 4045 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
NPIPA3F8WFD2 SOX6-208ENST00000527619 2699 ntAPPRIS ALT2 TSL 1 (best) BASIC6.48□□□□□ -1.37
NPIPA3F8WFD2 ZNF300-204ENST00000427179 4155 ntTSL 2 BASIC6.48□□□□□ -1.37
NPIPA3F8WFD2 ST6GAL1-211ENST00000448044 4302 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
NPIPA3F8WFD2 NAT1-210ENST00000545197 1827 ntTSL 5 BASIC6.48□□□□□ -1.37
NPIPA3F8WFD2 CCRL2-201ENST00000357392 1593 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
NPIPA3F8WFD2 TAT-201ENST00000355962 3983 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
NPIPA3F8WFD2 LINC01537-201ENST00000450804 2450 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
NPIPA3F8WFD2 OSGEPL1-204ENST00000519810 2216 ntTSL 2 BASIC6.48□□□□□ -1.37
NPIPA3F8WFD2 PPP4R3CP-201ENST00000412172 3131 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
NPIPA3F8WFD2 ABCD3-202ENST00000370214 3538 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
NPIPA3F8WFD2 CD300E-201ENST00000392619 3501 ntAPPRIS P2 TSL 1 (best) BASIC6.47□□□□□ -1.37
NPIPA3F8WFD2 SETDB1-201ENST00000271640 4437 ntAPPRIS ALT1 TSL 1 (best) BASIC6.47□□□□□ -1.37
NPIPA3F8WFD2 NF1P8-201ENST00000415351 1461 ntBASIC6.47□□□□□ -1.37
NPIPA3F8WFD2 CREM-216ENST00000429130 1476 ntTSL 5 BASIC6.47□□□□□ -1.37
NPIPA3F8WFD2 KARSP2-201ENST00000415696 1639 ntBASIC6.47□□□□□ -1.37
NPIPA3F8WFD2 AC012618.3-201ENST00000415793 2042 ntTSL 5 BASIC6.47□□□□□ -1.37
NPIPA3F8WFD2 SCAMP1-206ENST00000618166 1358 ntTSL 2 BASIC6.47□□□□□ -1.37
NPIPA3F8WFD2 NCOR1-205ENST00000395857 9501 ntTSL 5 BASIC6.47□□□□□ -1.37
NPIPA3F8WFD2 ADGRE4P-202ENST00000600751 2810 ntTSL 5 BASIC6.47□□□□□ -1.37
NPIPA3F8WFD2 LINC01697-202ENST00000426534 1764 ntTSL 2 BASIC6.47□□□□□ -1.37
NPIPA3F8WFD2 RBM41-202ENST00000372487 2579 ntAPPRIS ALT1 TSL 2 BASIC6.47□□□□□ -1.37
NPIPA3F8WFD2 AL035563.1-201ENST00000609087 1539 ntBASIC6.47□□□□□ -1.37
NPIPA3F8WFD2 MPDZ-219ENST00000546205 6342 ntAPPRIS ALT2 TSL 5 BASIC6.47□□□□□ -1.37
NPIPA3F8WFD2 ELMO2-203ENST00000372176 3678 ntTSL 5 BASIC6.47□□□□□ -1.37
NPIPA3F8WFD2 USP46-201ENST00000441222 7954 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
NPIPA3F8WFD2 EZH1-202ENST00000428826 4623 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
NPIPA3F8WFD2 RNA5SP472-201ENST00000363868 119 ntBASIC6.47□□□□□ -1.37
NPIPA3F8WFD2 RNU6-1055P-201ENST00000391085 107 ntBASIC6.47□□□□□ -1.37
NPIPA3F8WFD2 RNA5SP53-201ENST00000391299 120 ntBASIC6.47□□□□□ -1.37
NPIPA3F8WFD2 AL137058.2-203ENST00000398039 825 ntTSL 3 BASIC6.47□□□□□ -1.37
NPIPA3F8WFD2 AL136100.1-201ENST00000407696 330 ntBASIC6.47□□□□□ -1.37
NPIPA3F8WFD2 LINC00354-201ENST00000412119 347 ntTSL 5 BASIC6.47□□□□□ -1.37
NPIPA3F8WFD2 AC073115.2-201ENST00000416708 555 ntTSL 4 BASIC6.47□□□□□ -1.37
NPIPA3F8WFD2 HCG25-217ENST00000422366 702 ntTSL 3 BASIC6.47□□□□□ -1.37
NPIPA3F8WFD2 SNX19-202ENST00000426933 888 ntTSL 2 BASIC6.47□□□□□ -1.37
NPIPA3F8WFD2 CLYBL-AS2-201ENST00000430125 695 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
NPIPA3F8WFD2 PUDPP2-201ENST00000431423 643 ntBASIC6.47□□□□□ -1.37
NPIPA3F8WFD2 MIR181A1HG-202ENST00000432296 930 ntTSL 3 BASIC6.47□□□□□ -1.37
NPIPA3F8WFD2 LHFPL3-AS1-204ENST00000433514 748 ntTSL 2 BASIC6.47□□□□□ -1.37
NPIPA3F8WFD2 PA2G4P1-201ENST00000442248 1197 ntBASIC6.47□□□□□ -1.37
NPIPA3F8WFD2 AC005808.1-201ENST00000444112 381 ntTSL 2 BASIC6.47□□□□□ -1.37
NPIPA3F8WFD2 AC108463.2-201ENST00000451230 412 ntTSL 5 BASIC6.47□□□□□ -1.37
NPIPA3F8WFD2 NUCKS1P1-201ENST00000452067 703 ntBASIC6.47□□□□□ -1.37
NPIPA3F8WFD2 PSPC1P2-201ENST00000455130 225 ntBASIC6.47□□□□□ -1.37
NPIPA3F8WFD2 AC091982.1-202ENST00000473923 343 ntBASIC6.47□□□□□ -1.37
NPIPA3F8WFD2 AP000442.2-201ENST00000531108 440 ntTSL 3 BASIC6.47□□□□□ -1.37
NPIPA3F8WFD2 DPPA3P2-201ENST00000553589 478 ntBASIC6.47□□□□□ -1.37
NPIPA3F8WFD2 AC013283.1-201ENST00000557282 492 ntBASIC6.47□□□□□ -1.37
NPIPA3F8WFD2 AC079075.2-201ENST00000557964 449 ntTSL 4 BASIC6.47□□□□□ -1.37
NPIPA3F8WFD2 AC138811.1-201ENST00000569096 361 ntTSL 3 BASIC6.47□□□□□ -1.37
NPIPA3F8WFD2 ZNF675-204ENST00000599168 592 ntTSL 2 BASIC6.47□□□□□ -1.37
NPIPA3F8WFD2 FAM13A-AS1_2.1-201ENST00000611121 108 ntBASIC6.47□□□□□ -1.37
NPIPA3F8WFD2 Metazoa_SRP.207-201ENST00000612254 285 ntBASIC6.47□□□□□ -1.37
NPIPA3F8WFD2 AC005899.6-201ENST00000620729 297 ntBASIC6.47□□□□□ -1.37
NPIPA3F8WFD2 Z83818.2-201ENST00000635331 433 ntTSL 3 BASIC6.47□□□□□ -1.37
NPIPA3F8WFD2 AC009950.2-201ENST00000636548 183 ntBASIC6.47□□□□□ -1.37
NPIPA3F8WFD2 ZNF254-206ENST00000611359 3982 ntTSL 3 BASIC6.47□□□□□ -1.37
NPIPA3F8WFD2 MELK-211ENST00000545008 2236 ntTSL 2 BASIC6.47□□□□□ -1.37
NPIPA3F8WFD2 CLCN5-201ENST00000307367 3177 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
NPIPA3F8WFD2 ERBIN-205ENST00000416865 2351 ntTSL 2 BASIC6.47□□□□□ -1.37
NPIPA3F8WFD2 PRLR-219ENST00000619676 1402 ntTSL 5 BASIC6.47□□□□□ -1.37
NPIPA3F8WFD2 SLF1-201ENST00000265140 5905 ntAPPRIS P1 TSL 2 BASIC6.47□□□□□ -1.37
NPIPA3F8WFD2 GTDC1-212ENST00000463875 1563 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
NPIPA3F8WFD2 PSMC6-218ENST00000606149 1560 ntAPPRIS ALT1 TSL 1 (best) BASIC6.47□□□□□ -1.37
NPIPA3F8WFD2 KIAA1524-207ENST00000619684 2839 ntAPPRIS ALT1 TSL 5 BASIC6.47□□□□□ -1.37
NPIPA3F8WFD2 SLC4A8-202ENST00000358657 11731 ntAPPRIS ALT2 TSL 1 (best) BASIC6.47□□□□□ -1.37
NPIPA3F8WFD2 CACNA1D-219ENST00000636938 6868 ntAPPRIS ALT2 TSL 5 BASIC6.47□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 85 ms