Protein–RNA interactions for Protein: Q9BXY4

RSPO3, R-spondin-3, humanhuman

Predicted RBP Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO3Q9BXY4 ADGRL3-207ENST00000507625 4843 ntAPPRIS ALT2 TSL 5 BASIC6.38□□□□□ -1.39
RSPO3Q9BXY4 DICER1-204ENST00000527414 6179 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
RSPO3Q9BXY4 BUB3-203ENST00000368865 7828 ntAPPRIS P3 TSL 1 (best) BASIC6.38□□□□□ -1.39
RSPO3Q9BXY4 TAOK1-202ENST00000536202 4068 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
RSPO3Q9BXY4 PPHLN1-207ENST00000432191 3377 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
RSPO3Q9BXY4 L3MBTL3-209ENST00000533560 3165 ntAPPRIS ALT2 TSL 1 (best) BASIC6.37□□□□□ -1.39
RSPO3Q9BXY4 PHLPP2-201ENST00000393524 8467 ntTSL 2 BASIC6.37□□□□□ -1.39
RSPO3Q9BXY4 BRAFP1-201ENST00000445336 2703 ntBASIC6.37□□□□□ -1.39
RSPO3Q9BXY4 MR1-204ENST00000367580 7704 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
RSPO3Q9BXY4 MEPE-201ENST00000361056 1986 ntAPPRIS P3 TSL 1 (best) BASIC6.37□□□□□ -1.39
RSPO3Q9BXY4 MTURN-202ENST00000324489 5605 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
RSPO3Q9BXY4 CMAHP-202ENST00000377993 1681 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
RSPO3Q9BXY4 BLNK-203ENST00000413476 1599 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
RSPO3Q9BXY4 SPATA31A1-201ENST00000377647 4256 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
RSPO3Q9BXY4 SPATA31A7-206ENST00000619167 4256 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
RSPO3Q9BXY4 AL117339.4-201ENST00000608335 7063 ntBASIC6.37□□□□□ -1.39
RSPO3Q9BXY4 LRP12-201ENST00000276654 4112 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
RSPO3Q9BXY4 CCDC162P-202ENST00000368966 6751 ntBASIC6.37□□□□□ -1.39
RSPO3Q9BXY4 TOMM7-202ENST00000372879 514 ntTSL 4 BASIC6.37□□□□□ -1.39
RSPO3Q9BXY4 A2ML1-AS2-201ENST00000394240 386 ntTSL 5 BASIC6.37□□□□□ -1.39
RSPO3Q9BXY4 AC006333.1-204ENST00000429396 648 ntTSL 3 BASIC6.37□□□□□ -1.39
RSPO3Q9BXY4 AC018804.1-201ENST00000430381 618 ntBASIC6.37□□□□□ -1.39
RSPO3Q9BXY4 ZNF138-205ENST00000440155 1066 ntAPPRIS P3 TSL 2 BASIC6.37□□□□□ -1.39
RSPO3Q9BXY4 RPL29P7-201ENST00000440227 457 ntBASIC6.37□□□□□ -1.39
RSPO3Q9BXY4 DLG5-AS1-201ENST00000449852 487 ntTSL 2 BASIC6.37□□□□□ -1.39
RSPO3Q9BXY4 AL356157.1-201ENST00000456722 732 ntTSL 3 BASIC6.37□□□□□ -1.39
RSPO3Q9BXY4 RN7SL149P-201ENST00000465197 281 ntBASIC6.37□□□□□ -1.39
RSPO3Q9BXY4 CBX5P1-201ENST00000468470 561 ntBASIC6.37□□□□□ -1.39
RSPO3Q9BXY4 RN7SL145P-201ENST00000469955 296 ntBASIC6.37□□□□□ -1.39
RSPO3Q9BXY4 AC068522.1-201ENST00000482895 345 ntBASIC6.37□□□□□ -1.39
RSPO3Q9BXY4 RN7SL561P-201ENST00000488553 281 ntBASIC6.37□□□□□ -1.39
RSPO3Q9BXY4 AC021220.1-201ENST00000507445 630 ntBASIC6.37□□□□□ -1.39
RSPO3Q9BXY4 LINC01098-201ENST00000507870 1034 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
RSPO3Q9BXY4 NACAP6-201ENST00000509572 622 ntBASIC6.37□□□□□ -1.39
RSPO3Q9BXY4 RNA5SP518-201ENST00000515957 119 ntBASIC6.37□□□□□ -1.39
RSPO3Q9BXY4 TPT1-AS1-213ENST00000521336 759 ntTSL 5 BASIC6.37□□□□□ -1.39
RSPO3Q9BXY4 CASP1P2-201ENST00000526830 1258 ntBASIC6.37□□□□□ -1.39
RSPO3Q9BXY4 AC006205.2-201ENST00000538943 373 ntTSL 2 BASIC6.37□□□□□ -1.39
RSPO3Q9BXY4 TMEM132D-AS1-207ENST00000542535 442 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
RSPO3Q9BXY4 AC090673.2-201ENST00000544279 454 ntTSL 3 BASIC6.37□□□□□ -1.39
RSPO3Q9BXY4 AC023161.1-201ENST00000549532 420 ntTSL 3 BASIC6.37□□□□□ -1.39
RSPO3Q9BXY4 AL355102.4-201ENST00000553638 738 ntTSL 2 BASIC6.37□□□□□ -1.39
RSPO3Q9BXY4 AC022898.1-202ENST00000560864 806 ntTSL 2 BASIC6.37□□□□□ -1.39
RSPO3Q9BXY4 MIR4685-201ENST00000578185 69 ntBASIC6.37□□□□□ -1.39
RSPO3Q9BXY4 LINC01919-201ENST00000578610 568 ntTSL 5 BASIC6.37□□□□□ -1.39
RSPO3Q9BXY4 MIR5705-201ENST00000579870 89 ntBASIC6.37□□□□□ -1.39
RSPO3Q9BXY4 AC018521.2-202ENST00000582142 473 ntTSL 2 BASIC6.37□□□□□ -1.39
RSPO3Q9BXY4 AC011824.1-201ENST00000584863 561 ntTSL 4 BASIC6.37□□□□□ -1.39
RSPO3Q9BXY4 AC105227.1-201ENST00000586227 438 ntTSL 5 BASIC6.37□□□□□ -1.39
RSPO3Q9BXY4 ZNF397-211ENST00000592264 1104 ntTSL 3 BASIC6.37□□□□□ -1.39
RSPO3Q9BXY4 Z98949.1-217ENST00000609275 994 ntTSL 5 BASIC6.37□□□□□ -1.39
RSPO3Q9BXY4 AL161420.1-201ENST00000619393 264 ntBASIC6.37□□□□□ -1.39
RSPO3Q9BXY4 OR1N1-202ENST00000619659 939 ntBASIC6.37□□□□□ -1.39
RSPO3Q9BXY4 ACPP-201ENST00000336375 3125 ntAPPRIS P3 TSL 1 (best) BASIC6.37□□□□□ -1.39
RSPO3Q9BXY4 KIF27-201ENST00000297814 4653 ntAPPRIS P3 TSL 1 (best) BASIC6.37□□□□□ -1.39
RSPO3Q9BXY4 TMBIM6-202ENST00000395006 2598 ntAPPRIS P3 TSL 1 (best) BASIC6.37□□□□□ -1.39
RSPO3Q9BXY4 RAPGEF4-214ENST00000538974 3920 ntTSL 2 BASIC6.37□□□□□ -1.39
RSPO3Q9BXY4 CACNA2D3-210ENST00000490478 3557 ntAPPRIS ALT2 TSL 1 (best) BASIC6.37□□□□□ -1.39
RSPO3Q9BXY4 NRXN1-248ENST00000636345 3595 ntTSL 5 BASIC6.37□□□□□ -1.39
RSPO3Q9BXY4 NLRP13-202ENST00000588751 3533 ntAPPRIS ALT2 TSL 5 BASIC6.37□□□□□ -1.39
RSPO3Q9BXY4 KIAA1549L-202ENST00000321505 11678 ntAPPRIS P2 TSL 1 (best) BASIC6.37□□□□□ -1.39
RSPO3Q9BXY4 TNFRSF19-203ENST00000382263 4151 ntAPPRIS ALT2 TSL 1 (best) BASIC6.36□□□□□ -1.39
RSPO3Q9BXY4 NAV2-202ENST00000360655 10667 ntAPPRIS ALT2 TSL 1 (best) BASIC6.36□□□□□ -1.39
RSPO3Q9BXY4 MED31-201ENST00000225728 1654 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
RSPO3Q9BXY4 ATM-201ENST00000278616 13147 ntAPPRIS P1 TSL 5 BASIC6.36□□□□□ -1.39
RSPO3Q9BXY4 MYCBP2-212ENST00000612956 1542 ntTSL 5 BASIC6.36□□□□□ -1.39
RSPO3Q9BXY4 C1QTNF7-201ENST00000295297 4516 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
RSPO3Q9BXY4 COX7B-203ENST00000481445 2471 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
RSPO3Q9BXY4 AC015969.1-201ENST00000366218 1416 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
RSPO3Q9BXY4 MBNL3-203ENST00000370849 1444 ntTSL 2 BASIC6.36□□□□□ -1.39
RSPO3Q9BXY4 MEF2C-254ENST00000637732 3347 ntTSL 5 BASIC6.36□□□□□ -1.39
RSPO3Q9BXY4 GABPB2-202ENST00000368918 8964 ntAPPRIS P3 TSL 1 (best) BASIC6.36□□□□□ -1.39
RSPO3Q9BXY4 BMPR2-202ENST00000374580 11461 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
RSPO3Q9BXY4 ZNF253-201ENST00000355650 2268 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
RSPO3Q9BXY4 SNX25-207ENST00000618785 3151 ntTSL 5 BASIC6.36□□□□□ -1.39
RSPO3Q9BXY4 ADGRE1-203ENST00000381404 3056 ntTSL 2 BASIC6.36□□□□□ -1.39
RSPO3Q9BXY4 HESX1-201ENST00000295934 981 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
RSPO3Q9BXY4 OR5A1-201ENST00000302030 1051 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
RSPO3Q9BXY4 SPRR2D-202ENST00000368756 788 ntAPPRIS P1 TSL 2 BASIC6.36□□□□□ -1.39
RSPO3Q9BXY4 OR10A4-201ENST00000379829 995 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
RSPO3Q9BXY4 TRAV12-3-201ENST00000390442 399 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
RSPO3Q9BXY4 FAUP2-201ENST00000394301 401 ntBASIC6.36□□□□□ -1.39
RSPO3Q9BXY4 AP001043.1-203ENST00000415824 407 ntTSL 5 BASIC6.36□□□□□ -1.39
RSPO3Q9BXY4 VDAC1P10-201ENST00000416715 891 ntBASIC6.36□□□□□ -1.39
RSPO3Q9BXY4 ANXA2P2-201ENST00000435128 1020 ntBASIC6.36□□□□□ -1.39
RSPO3Q9BXY4 AC010878.1-201ENST00000456500 1047 ntBASIC6.36□□□□□ -1.39
RSPO3Q9BXY4 AC129807.1-201ENST00000471614 591 ntTSL 4 BASIC6.36□□□□□ -1.39
RSPO3Q9BXY4 ZNF286A-205ENST00000472486 827 ntTSL 2 BASIC6.36□□□□□ -1.39
RSPO3Q9BXY4 CEACAMP3-202ENST00000483806 638 ntBASIC6.36□□□□□ -1.39
RSPO3Q9BXY4 AC079944.1-201ENST00000485426 495 ntBASIC6.36□□□□□ -1.39
RSPO3Q9BXY4 AK6-204ENST00000512561 587 ntTSL 5 BASIC6.36□□□□□ -1.39
RSPO3Q9BXY4 XAGE1B-205ENST00000518075 472 ntAPPRIS P1 TSL 2 BASIC6.36□□□□□ -1.39
RSPO3Q9BXY4 AC087360.1-201ENST00000518788 616 ntBASIC6.36□□□□□ -1.39
RSPO3Q9BXY4 TACC1-207ENST00000519416 5510 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
RSPO3Q9BXY4 AC027309.1-201ENST00000519976 528 ntTSL 4 BASIC6.36□□□□□ -1.39
RSPO3Q9BXY4 TACC1-210ENST00000520615 5509 ntTSL 2 BASIC6.36□□□□□ -1.39
RSPO3Q9BXY4 RRM1-AS1-201ENST00000529323 346 ntTSL 5 BASIC6.36□□□□□ -1.39
RSPO3Q9BXY4 AC079866.1-201ENST00000534985 1220 ntBASIC6.36□□□□□ -1.39
RSPO3Q9BXY4 NXPE2P1-201ENST00000543705 726 ntBASIC6.36□□□□□ -1.39
RSPO3Q9BXY4 AL049844.1-201ENST00000545614 762 ntAPPRIS P1 TSL 5 BASIC6.36□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 88.2 ms