Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 ZNF695-204ENST00000487338 826 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
AP1S3Q96PC3 AL031073.1-201ENST00000503029 1139 ntBASIC5.26□□□□□ -1.57
AP1S3Q96PC3 TECRP2-201ENST00000503270 928 ntBASIC5.26□□□□□ -1.57
AP1S3Q96PC3 AC097375.1-201ENST00000507949 488 ntTSL 3 BASIC5.26□□□□□ -1.57
AP1S3Q96PC3 AC012613.1-202ENST00000512647 424 ntTSL 3 BASIC5.26□□□□□ -1.57
AP1S3Q96PC3 AC083841.1-201ENST00000523657 670 ntTSL 2 BASIC5.26□□□□□ -1.57
AP1S3Q96PC3 AP003385.2-201ENST00000524910 973 ntBASIC5.26□□□□□ -1.57
AP1S3Q96PC3 FAM66C-206ENST00000535567 724 ntTSL 5 BASIC5.26□□□□□ -1.57
AP1S3Q96PC3 ETFBKMT-204ENST00000538391 1067 ntTSL 3 BASIC5.26□□□□□ -1.57
AP1S3Q96PC3 AC055736.1-201ENST00000548135 629 ntTSL 3 BASIC5.26□□□□□ -1.57
AP1S3Q96PC3 AL162171.2-201ENST00000555444 905 ntTSL 3 BASIC5.26□□□□□ -1.57
AP1S3Q96PC3 SPATA8-AS1-202ENST00000560888 392 ntTSL 5 BASIC5.26□□□□□ -1.57
AP1S3Q96PC3 AC007611.1-202ENST00000564212 854 ntTSL 3 BASIC5.26□□□□□ -1.57
AP1S3Q96PC3 CDH13-207ENST00000565636 810 ntTSL 5 BASIC5.26□□□□□ -1.57
AP1S3Q96PC3 TMEM202-202ENST00000567679 588 ntAPPRIS ALT2 TSL 2 BASIC5.26□□□□□ -1.57
AP1S3Q96PC3 AL023284.3-202ENST00000571188 543 ntTSL 5 BASIC5.26□□□□□ -1.57
AP1S3Q96PC3 RN7SL192P-201ENST00000584303 299 ntBASIC5.26□□□□□ -1.57
AP1S3Q96PC3 MCM3AP-AS1-207ENST00000588753 589 ntTSL 4 BASIC5.26□□□□□ -1.57
AP1S3Q96PC3 LINC00674-202ENST00000590734 160 ntBASIC5.26□□□□□ -1.57
AP1S3Q96PC3 AC137695.2-201ENST00000603123 754 ntBASIC5.26□□□□□ -1.57
AP1S3Q96PC3 AC211469.1-201ENST00000604263 394 ntBASIC5.26□□□□□ -1.57
AP1S3Q96PC3 AL109918.2-201ENST00000605188 279 ntBASIC5.26□□□□□ -1.57
AP1S3Q96PC3 AL356052.1-201ENST00000605764 376 ntBASIC5.26□□□□□ -1.57
AP1S3Q96PC3 AP005328.2-201ENST00000606879 657 ntTSL 3 BASIC5.26□□□□□ -1.57
AP1S3Q96PC3 Metazoa_SRP.123-201ENST00000616695 286 ntBASIC5.26□□□□□ -1.57
AP1S3Q96PC3 SPINK6-203ENST00000621437 605 ntAPPRIS P1 TSL 3 BASIC5.26□□□□□ -1.57
AP1S3Q96PC3 AC063952.1-203ENST00000634410 658 ntBASIC5.26□□□□□ -1.57
AP1S3Q96PC3 PARD3B-214ENST00000622699 7442 ntTSL 5 BASIC5.26□□□□□ -1.57
AP1S3Q96PC3 AC087045.3-201ENST00000623046 2468 ntBASIC5.26□□□□□ -1.57
AP1S3Q96PC3 AC005162.3-201ENST00000609389 3695 ntTSL 5 BASIC5.26□□□□□ -1.57
AP1S3Q96PC3 TCF7L2-206ENST00000355995 4073 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
AP1S3Q96PC3 TMEM209-201ENST00000397622 3545 ntAPPRIS P2 TSL 1 (best) BASIC5.26□□□□□ -1.57
AP1S3Q96PC3 GUSBP1-205ENST00000607545 4157 ntTSL 2 BASIC5.26□□□□□ -1.57
AP1S3Q96PC3 AC022034.1-201ENST00000512867 2156 ntBASIC5.26□□□□□ -1.57
AP1S3Q96PC3 AGBL1-205ENST00000635782 3201 ntAPPRIS P2 TSL 5 BASIC5.26□□□□□ -1.57
AP1S3Q96PC3 RSF1-204ENST00000480887 5318 ntAPPRIS ALT2 TSL 1 (best) BASIC5.26□□□□□ -1.57
AP1S3Q96PC3 MEF2C-225ENST00000625585 3467 ntAPPRIS ALT1 TSL 5 BASIC5.26□□□□□ -1.57
AP1S3Q96PC3 LIPF-202ENST00000355843 1357 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
AP1S3Q96PC3 SEC61A2-202ENST00000304267 2030 ntTSL 2 BASIC5.26□□□□□ -1.57
AP1S3Q96PC3 CLCN5-202ENST00000376088 10108 ntTSL 2 BASIC5.26□□□□□ -1.57
AP1S3Q96PC3 MAP3K7CL-209ENST00000399947 2003 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
AP1S3Q96PC3 WDR64-201ENST00000366552 4371 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
AP1S3Q96PC3 OR2H1-201ENST00000377132 2253 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
AP1S3Q96PC3 ODF2-205ENST00000393527 3653 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
AP1S3Q96PC3 CNTN5-202ENST00000418526 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC5.26□□□□□ -1.57
AP1S3Q96PC3 GPX6-201ENST00000361902 1712 ntAPPRIS P2 TSL 1 (best) BASIC5.26□□□□□ -1.57
AP1S3Q96PC3 AC093909.4-201ENST00000514297 1991 ntTSL 5 BASIC5.25□□□□□ -1.57
AP1S3Q96PC3 LINC02388-201ENST00000550678 1975 ntTSL 2 BASIC5.25□□□□□ -1.57
AP1S3Q96PC3 AC104837.1-201ENST00000444644 1587 ntBASIC5.25□□□□□ -1.57
AP1S3Q96PC3 AC130360.2-201ENST00000533477 1556 ntBASIC5.25□□□□□ -1.57
AP1S3Q96PC3 ASNS-209ENST00000444334 1812 ntTSL 2 BASIC5.25□□□□□ -1.57
AP1S3Q96PC3 OR4F17-203ENST00000618231 2586 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
AP1S3Q96PC3 CCDC125-202ENST00000396496 4198 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
AP1S3Q96PC3 AQP4-AS1-202ENST00000578701 2177 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
AP1S3Q96PC3 IFI44-201ENST00000370747 1687 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
AP1S3Q96PC3 EEF1A1P4-201ENST00000359165 1405 ntBASIC5.25□□□□□ -1.57
AP1S3Q96PC3 HAUS3-201ENST00000243706 5620 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
AP1S3Q96PC3 TM2D2-203ENST00000456845 3295 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
AP1S3Q96PC3 LINC01722-201ENST00000456265 3033 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
AP1S3Q96PC3 C16orf62-202ENST00000417362 3115 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
AP1S3Q96PC3 ARMCX5-201ENST00000246174 2899 ntAPPRIS P1 TSL 2 BASIC5.25□□□□□ -1.57
AP1S3Q96PC3 LINC-ROR-201ENST00000553704 2603 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
AP1S3Q96PC3 TMEM230-204ENST00000379277 1536 ntAPPRIS P1 TSL 3 BASIC5.25□□□□□ -1.57
AP1S3Q96PC3 DTNA-226ENST00000596745 1508 ntTSL 2 BASIC5.25□□□□□ -1.57
AP1S3Q96PC3 KCNIP2-202ENST00000343195 663 ntAPPRIS P3 TSL 1 (best) BASIC5.25□□□□□ -1.57
AP1S3Q96PC3 SGMS1-201ENST00000361543 1096 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
AP1S3Q96PC3 AMELY-202ENST00000383036 621 ntTSL 5 BASIC5.25□□□□□ -1.57
AP1S3Q96PC3 AC007091.1-201ENST00000412563 566 ntTSL 5 BASIC5.25□□□□□ -1.57
AP1S3Q96PC3 AC099560.1-201ENST00000412811 500 ntTSL 4 BASIC5.25□□□□□ -1.57
AP1S3Q96PC3 RPL7AP72-201ENST00000417266 768 ntBASIC5.25□□□□□ -1.57
AP1S3Q96PC3 RPL17P17-201ENST00000419491 557 ntBASIC5.25□□□□□ -1.57
AP1S3Q96PC3 EEF1A1P34-201ENST00000419888 1267 ntBASIC5.25□□□□□ -1.57
AP1S3Q96PC3 LINC01811-202ENST00000424786 787 ntTSL 5 BASIC5.25□□□□□ -1.57
AP1S3Q96PC3 RANP5-201ENST00000427731 655 ntBASIC5.25□□□□□ -1.57
AP1S3Q96PC3 RPL7P7-201ENST00000428803 703 ntBASIC5.25□□□□□ -1.57
AP1S3Q96PC3 DDX11L10-201ENST00000430178 571 ntBASIC5.25□□□□□ -1.57
AP1S3Q96PC3 LINC00869-202ENST00000430442 1065 ntTSL 5 BASIC5.25□□□□□ -1.57
AP1S3Q96PC3 LINC01852-201ENST00000434223 967 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
AP1S3Q96PC3 AC073115.1-201ENST00000436056 532 ntTSL 4 BASIC5.25□□□□□ -1.57
AP1S3Q96PC3 H3F3BP1-201ENST00000440551 403 ntBASIC5.25□□□□□ -1.57
AP1S3Q96PC3 LINC02474-202ENST00000441160 1148 ntTSL 5 BASIC5.25□□□□□ -1.57
AP1S3Q96PC3 LINC00460-203ENST00000444865 739 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
AP1S3Q96PC3 AL451074.4-201ENST00000447545 470 ntBASIC5.25□□□□□ -1.57
AP1S3Q96PC3 PRDX1P1-201ENST00000449329 596 ntBASIC5.25□□□□□ -1.57
AP1S3Q96PC3 ANAPC10-202ENST00000451299 928 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
AP1S3Q96PC3 CXCR6-203ENST00000457814 1184 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
AP1S3Q96PC3 KCNIP2-211ENST00000461105 858 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
AP1S3Q96PC3 RN7SL414P-201ENST00000469545 294 ntBASIC5.25□□□□□ -1.57
AP1S3Q96PC3 QTRT2-209ENST00000479882 1196 ntTSL 2 BASIC5.25□□□□□ -1.57
AP1S3Q96PC3 AC009153.1-201ENST00000485799 496 ntBASIC5.25□□□□□ -1.57
AP1S3Q96PC3 AC112219.1-201ENST00000491567 947 ntTSL 3 BASIC5.25□□□□□ -1.57
AP1S3Q96PC3 AC084337.1-201ENST00000524809 686 ntBASIC5.25□□□□□ -1.57
AP1S3Q96PC3 LRTOMT-212ENST00000536917 579 ntTSL 3 BASIC5.25□□□□□ -1.57
AP1S3Q96PC3 NOVA1-209ENST00000547619 947 ntTSL 3 BASIC5.25□□□□□ -1.57
AP1S3Q96PC3 AC023310.2-201ENST00000553844 547 ntBASIC5.25□□□□□ -1.57
AP1S3Q96PC3 SRSF5-209ENST00000555349 565 ntTSL 4 BASIC5.25□□□□□ -1.57
AP1S3Q96PC3 AC023908.2-201ENST00000558616 318 ntTSL 3 BASIC5.25□□□□□ -1.57
AP1S3Q96PC3 RAB27A-205ENST00000564609 1057 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
AP1S3Q96PC3 AC023827.2-201ENST00000566880 1061 ntBASIC5.25□□□□□ -1.57
AP1S3Q96PC3 AC015853.3-201ENST00000570974 478 ntTSL 4 BASIC5.25□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 92.2 ms