Protein–RNA interactions for Protein: Q6VVB1

NHLRC1, E3 ubiquitin-protein ligase NHLRC1, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC1Q6VVB1 TRAPPC11-209ENST00000512476 2546 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
NHLRC1Q6VVB1 MKL2-201ENST00000318282 8608 ntAPPRIS P3 TSL 5 BASIC6.39□□□□□ -1.39
NHLRC1Q6VVB1 AL121949.2-201ENST00000403446 1548 ntBASIC6.39□□□□□ -1.39
NHLRC1Q6VVB1 HBS1L-206ENST00000415177 2636 ntTSL 5 BASIC6.39□□□□□ -1.39
NHLRC1Q6VVB1 AC001226.2-204ENST00000638101 2645 ntAPPRIS ALT2 TSL 5 BASIC6.39□□□□□ -1.39
NHLRC1Q6VVB1 FRMD4B-210ENST00000478263 3761 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
NHLRC1Q6VVB1 GRIK2-206ENST00000413795 4876 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
NHLRC1Q6VVB1 DACH2-207ENST00000510272 1764 ntTSL 2 BASIC6.39□□□□□ -1.39
NHLRC1Q6VVB1 AC020978.6-201ENST00000571197 3177 ntBASIC6.39□□□□□ -1.39
NHLRC1Q6VVB1 GPATCH2-202ENST00000366935 5851 ntAPPRIS P1 TSL 2 BASIC6.38□□□□□ -1.39
NHLRC1Q6VVB1 AC008957.3-201ENST00000624112 2242 ntBASIC6.38□□□□□ -1.39
NHLRC1Q6VVB1 FLRT3-201ENST00000341420 3971 ntAPPRIS P1 TSL 2 BASIC6.38□□□□□ -1.39
NHLRC1Q6VVB1 CPS1-203ENST00000430249 5698 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
NHLRC1Q6VVB1 MEF2C-244ENST00000636998 5936 ntTSL 5 BASIC6.38□□□□□ -1.39
NHLRC1Q6VVB1 AC006305.1-201ENST00000382897 2558 ntTSL 2 BASIC6.38□□□□□ -1.39
NHLRC1Q6VVB1 OR4F17-203ENST00000618231 2586 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
NHLRC1Q6VVB1 FOXP2-201ENST00000350908 2638 ntAPPRIS P2 TSL 1 (best) BASIC6.38□□□□□ -1.39
NHLRC1Q6VVB1 ALMS1-207ENST00000614410 11700 ntAPPRIS ALT2 TSL 5 BASIC6.38□□□□□ -1.39
NHLRC1Q6VVB1 TEX11-204ENST00000395889 3133 ntAPPRIS P3 TSL 2 BASIC6.38□□□□□ -1.39
NHLRC1Q6VVB1 ITGA2-201ENST00000296585 7869 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
NHLRC1Q6VVB1 KAT7-203ENST00000435742 3638 ntTSL 2 BASIC6.38□□□□□ -1.39
NHLRC1Q6VVB1 LIMA1-202ENST00000394943 3669 ntAPPRIS ALT2 TSL 1 (best) BASIC6.38□□□□□ -1.39
NHLRC1Q6VVB1 PLCH1-203ENST00000447496 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC6.38□□□□□ -1.39
NHLRC1Q6VVB1 TPPP2-201ENST00000321760 752 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
NHLRC1Q6VVB1 RNU6-167P-201ENST00000384292 106 ntBASIC6.38□□□□□ -1.39
NHLRC1Q6VVB1 IGLV5-52-201ENST00000390289 379 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
NHLRC1Q6VVB1 TRAV5-201ENST00000390427 352 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
NHLRC1Q6VVB1 AC226101.1-201ENST00000401483 387 ntBASIC6.38□□□□□ -1.39
NHLRC1Q6VVB1 AC073900.1-201ENST00000429766 776 ntBASIC6.38□□□□□ -1.39
NHLRC1Q6VVB1 LINC01732-201ENST00000435023 542 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
NHLRC1Q6VVB1 AC005487.1-201ENST00000440208 665 ntTSL 5 BASIC6.38□□□□□ -1.39
NHLRC1Q6VVB1 FREM2-AS1-201ENST00000448887 465 ntTSL 2 BASIC6.38□□□□□ -1.39
NHLRC1Q6VVB1 LINC01961-201ENST00000449954 745 ntTSL 5 BASIC6.38□□□□□ -1.39
NHLRC1Q6VVB1 EAF2-202ENST00000451944 960 ntTSL 2 BASIC6.38□□□□□ -1.39
NHLRC1Q6VVB1 MBNL1-213ENST00000465907 945 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
NHLRC1Q6VVB1 RASGRF2-AS1-201ENST00000505107 665 ntTSL 3 BASIC6.38□□□□□ -1.39
NHLRC1Q6VVB1 LINC01085-203ENST00000511195 326 ntBASIC6.38□□□□□ -1.39
NHLRC1Q6VVB1 XAGE1B-205ENST00000518075 472 ntAPPRIS P1 TSL 2 BASIC6.38□□□□□ -1.39
NHLRC1Q6VVB1 AP000873.2-209ENST00000528083 547 ntTSL 4 BASIC6.38□□□□□ -1.39
NHLRC1Q6VVB1 EIF4EP5-201ENST00000528228 640 ntBASIC6.38□□□□□ -1.39
NHLRC1Q6VVB1 AP003721.1-201ENST00000543907 864 ntTSL 3 BASIC6.38□□□□□ -1.39
NHLRC1Q6VVB1 AC016526.1-201ENST00000555465 520 ntTSL 3 BASIC6.38□□□□□ -1.39
NHLRC1Q6VVB1 C10orf82-203ENST00000588184 852 ntAPPRIS ALT2 TSL 3 BASIC6.38□□□□□ -1.39
NHLRC1Q6VVB1 RPSAP66-201ENST00000592196 606 ntBASIC6.38□□□□□ -1.39
NHLRC1Q6VVB1 AC027271.1-201ENST00000610270 610 ntBASIC6.38□□□□□ -1.39
NHLRC1Q6VVB1 AL121809.2-201ENST00000613169 341 ntBASIC6.38□□□□□ -1.39
NHLRC1Q6VVB1 MIR6726-201ENST00000613751 61 ntBASIC6.38□□□□□ -1.39
NHLRC1Q6VVB1 AC104461.1-201ENST00000637430 817 ntTSL 5 BASIC6.38□□□□□ -1.39
NHLRC1Q6VVB1 OR7E161P-202ENST00000641994 1033 ntBASIC6.38□□□□□ -1.39
NHLRC1Q6VVB1 UG0898H09-202ENST00000623646 7040 ntBASIC6.38□□□□□ -1.39
NHLRC1Q6VVB1 KMT2C-201ENST00000262189 16862 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
NHLRC1Q6VVB1 KMT2C-202ENST00000355193 16858 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
NHLRC1Q6VVB1 MED6-212ENST00000615788 1700 ntTSL 5 BASIC6.38□□□□□ -1.39
NHLRC1Q6VVB1 MEIOB-205ENST00000470044 1857 ntTSL 2 BASIC6.38□□□□□ -1.39
NHLRC1Q6VVB1 NUDT13-206ENST00000537969 2151 ntTSL 2 BASIC6.38□□□□□ -1.39
NHLRC1Q6VVB1 IL1RAP-212ENST00000443369 2760 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
NHLRC1Q6VVB1 SLC2A14-201ENST00000340749 3699 ntAPPRIS ALT2 TSL 2 BASIC6.38□□□□□ -1.39
NHLRC1Q6VVB1 CNTNAP4-209ENST00000622250 3783 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
NHLRC1Q6VVB1 CD163-201ENST00000359156 4268 ntAPPRIS P3 TSL 1 (best) BASIC6.38□□□□□ -1.39
NHLRC1Q6VVB1 ZRANB3-202ENST00000401392 6820 ntAPPRIS ALT2 TSL 1 (best) BASIC6.38□□□□□ -1.39
NHLRC1Q6VVB1 BRWD1-203ENST00000342449 12929 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
NHLRC1Q6VVB1 RNF4-214ENST00000511600 4123 ntAPPRIS P1 TSL 2 BASIC6.37□□□□□ -1.39
NHLRC1Q6VVB1 NPIPB5-209ENST00000517539 3569 ntAPPRIS P2 TSL 5 BASIC6.37□□□□□ -1.39
NHLRC1Q6VVB1 GCNA-201ENST00000373695 3213 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
NHLRC1Q6VVB1 AC007406.5-201ENST00000570140 3170 ntBASIC6.37□□□□□ -1.39
NHLRC1Q6VVB1 LARP1B-203ENST00000432347 2707 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
NHLRC1Q6VVB1 TMEM75-201ENST00000624314 2165 ntBASIC6.37□□□□□ -1.39
NHLRC1Q6VVB1 ZNF562-202ENST00000453372 2111 ntAPPRIS P3 TSL 3 BASIC6.37□□□□□ -1.39
NHLRC1Q6VVB1 KIAA0391-201ENST00000250377 6118 ntTSL 2 BASIC6.37□□□□□ -1.39
NHLRC1Q6VVB1 ZNF573-201ENST00000339503 2014 ntTSL 5 BASIC6.37□□□□□ -1.39
NHLRC1Q6VVB1 CACNB4-254ENST00000637514 1880 ntTSL 5 BASIC6.37□□□□□ -1.39
NHLRC1Q6VVB1 OR5AQ1P-203ENST00000641818 1529 ntBASIC6.37□□□□□ -1.39
NHLRC1Q6VVB1 GAPVD1-203ENST00000312123 4320 ntAPPRIS ALT1 TSL 1 (best) BASIC6.37□□□□□ -1.39
NHLRC1Q6VVB1 AL390726.6-202ENST00000635962 1365 ntTSL 5 BASIC6.37□□□□□ -1.39
NHLRC1Q6VVB1 TAS2R7-201ENST00000240687 1096 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
NHLRC1Q6VVB1 OR52N5-201ENST00000317093 1034 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
NHLRC1Q6VVB1 OR2G6-201ENST00000343414 1049 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
NHLRC1Q6VVB1 C1orf162-201ENST00000343534 1107 ntAPPRIS P3 TSL 1 (best) BASIC6.37□□□□□ -1.39
NHLRC1Q6VVB1 FAM204BP-201ENST00000369171 701 ntBASIC6.37□□□□□ -1.39
NHLRC1Q6VVB1 ASPH-204ENST00000389204 1290 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
NHLRC1Q6VVB1 TYMSP1-201ENST00000407851 869 ntBASIC6.37□□□□□ -1.39
NHLRC1Q6VVB1 SNORA81-201ENST00000408493 178 ntBASIC6.37□□□□□ -1.39
NHLRC1Q6VVB1 AC012451.1-201ENST00000412312 357 ntTSL 3 BASIC6.37□□□□□ -1.39
NHLRC1Q6VVB1 VN1R66P-201ENST00000412929 916 ntBASIC6.37□□□□□ -1.39
NHLRC1Q6VVB1 FABP5P1-201ENST00000423401 411 ntBASIC6.37□□□□□ -1.39
NHLRC1Q6VVB1 GSTA6P-201ENST00000424144 582 ntBASIC6.37□□□□□ -1.39
NHLRC1Q6VVB1 RBMY2JP-201ENST00000425544 1059 ntBASIC6.37□□□□□ -1.39
NHLRC1Q6VVB1 MIR181A2HG-201ENST00000429139 662 ntTSL 2 BASIC6.37□□□□□ -1.39
NHLRC1Q6VVB1 AL450384.2-202ENST00000436485 656 ntTSL 3 BASIC6.37□□□□□ -1.39
NHLRC1Q6VVB1 LINC00570-203ENST00000437795 490 ntTSL 3 BASIC6.37□□□□□ -1.39
NHLRC1Q6VVB1 FABP5P2-201ENST00000439042 408 ntBASIC6.37□□□□□ -1.39
NHLRC1Q6VVB1 AC009237.4-201ENST00000441078 238 ntBASIC6.37□□□□□ -1.39
NHLRC1Q6VVB1 CEACAMP5-201ENST00000448037 961 ntBASIC6.37□□□□□ -1.39
NHLRC1Q6VVB1 AC016489.1-201ENST00000461109 375 ntBASIC6.37□□□□□ -1.39
NHLRC1Q6VVB1 PABPC1P10-201ENST00000464731 381 ntBASIC6.37□□□□□ -1.39
NHLRC1Q6VVB1 AC026254.2-201ENST00000475295 371 ntBASIC6.37□□□□□ -1.39
NHLRC1Q6VVB1 NSRP1-205ENST00000479218 540 ntTSL 3 BASIC6.37□□□□□ -1.39
NHLRC1Q6VVB1 CEACAMP3-202ENST00000483806 638 ntBASIC6.37□□□□□ -1.39
NHLRC1Q6VVB1 PDPN-205ENST00000487038 607 ntTSL 2 BASIC6.37□□□□□ -1.39
NHLRC1Q6VVB1 PGAM4P2-201ENST00000512491 721 ntBASIC6.37□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 112.5 ms