Protein–RNA interactions for Protein: Q9BXY4

RSPO3, R-spondin-3, humanhuman

Predicted RBP Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO3Q9BXY4 RNASEL-201ENST00000367559 4238 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
RSPO3Q9BXY4 PIGN-233ENST00000639342 4305 ntTSL 5 BASIC6.39□□□□□ -1.39
RSPO3Q9BXY4 AC093010.2-202ENST00000493033 3023 ntTSL 2 BASIC6.39□□□□□ -1.39
RSPO3Q9BXY4 NPL-212ENST00000614468 2376 ntTSL 5 BASIC6.39□□□□□ -1.39
RSPO3Q9BXY4 LAMB4-202ENST00000388781 5858 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
RSPO3Q9BXY4 CHRM5-202ENST00000557872 2687 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
RSPO3Q9BXY4 LAMA2-205ENST00000617695 9678 ntAPPRIS ALT2 TSL 5 BASIC6.39□□□□□ -1.39
RSPO3Q9BXY4 LAMA2-206ENST00000618192 9687 ntAPPRIS ALT2 TSL 5 BASIC6.39□□□□□ -1.39
RSPO3Q9BXY4 CTNND1-207ENST00000426142 5800 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
RSPO3Q9BXY4 ELMO1-202ENST00000396040 1982 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
RSPO3Q9BXY4 FBXW7-203ENST00000296555 3572 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
RSPO3Q9BXY4 ATP1A1-203ENST00000369496 3572 ntTSL 2 BASIC6.39□□□□□ -1.39
RSPO3Q9BXY4 CHRM3-201ENST00000255380 8780 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
RSPO3Q9BXY4 VNN3-201ENST00000275223 1260 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
RSPO3Q9BXY4 NOX4-203ENST00000375979 816 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
RSPO3Q9BXY4 RNA5SP231-201ENST00000410496 138 ntBASIC6.39□□□□□ -1.39
RSPO3Q9BXY4 CLIC4P3-201ENST00000422221 752 ntBASIC6.39□□□□□ -1.39
RSPO3Q9BXY4 AL136115.1-201ENST00000447478 517 ntTSL 2 BASIC6.39□□□□□ -1.39
RSPO3Q9BXY4 SSR1-206ENST00000479365 1118 ntTSL 5 BASIC6.39□□□□□ -1.39
RSPO3Q9BXY4 AC027315.1-201ENST00000511592 469 ntTSL 3 BASIC6.39□□□□□ -1.39
RSPO3Q9BXY4 AC055860.1-201ENST00000525523 688 ntTSL 5 BASIC6.39□□□□□ -1.39
RSPO3Q9BXY4 AC103855.4-201ENST00000533158 265 ntBASIC6.39□□□□□ -1.39
RSPO3Q9BXY4 AP003721.1-201ENST00000543907 864 ntTSL 3 BASIC6.39□□□□□ -1.39
RSPO3Q9BXY4 OR5BK1P-201ENST00000550421 823 ntBASIC6.39□□□□□ -1.39
RSPO3Q9BXY4 AC079075.2-201ENST00000557964 449 ntTSL 4 BASIC6.39□□□□□ -1.39
RSPO3Q9BXY4 AL512605.1-201ENST00000588215 1263 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
RSPO3Q9BXY4 AC092032.1-201ENST00000603090 165 ntBASIC6.39□□□□□ -1.39
RSPO3Q9BXY4 AC012510.1-201ENST00000607946 759 ntBASIC6.39□□□□□ -1.39
RSPO3Q9BXY4 ELMO2P1-201ENST00000611569 473 ntTSL 5 BASIC6.39□□□□□ -1.39
RSPO3Q9BXY4 MIR6731-201ENST00000614863 72 ntBASIC6.39□□□□□ -1.39
RSPO3Q9BXY4 FP325318.1-201ENST00000616097 1263 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
RSPO3Q9BXY4 CCNT1-206ENST00000640148 596 ntTSL 5 BASIC6.39□□□□□ -1.39
RSPO3Q9BXY4 WNK3-203ENST00000375169 11172 ntAPPRIS ALT1 TSL 5 BASIC6.39□□□□□ -1.39
RSPO3Q9BXY4 NUSAP1-202ENST00000414849 2274 ntAPPRIS ALT2 TSL 1 (best) BASIC6.39□□□□□ -1.39
RSPO3Q9BXY4 RNGTT-203ENST00000538899 1374 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
RSPO3Q9BXY4 PWRN1-211ENST00000568609 1443 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
RSPO3Q9BXY4 NBPF8-201ENST00000583271 5330 ntBASIC6.39□□□□□ -1.39
RSPO3Q9BXY4 PHF11-201ENST00000357596 1471 ntAPPRIS ALT2 TSL 5 BASIC6.39□□□□□ -1.39
RSPO3Q9BXY4 CCNB3-204ENST00000376042 4693 ntAPPRIS P1 TSL 2 BASIC6.39□□□□□ -1.39
RSPO3Q9BXY4 AC083806.2-201ENST00000617795 2685 ntBASIC6.39□□□□□ -1.39
RSPO3Q9BXY4 AC092807.3-203ENST00000467530 2745 ntTSL 2 BASIC6.39□□□□□ -1.39
RSPO3Q9BXY4 CACNA1D-224ENST00000637424 6856 ntAPPRIS ALT2 TSL 5 BASIC6.39□□□□□ -1.39
RSPO3Q9BXY4 GRPR-201ENST00000380289 1929 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
RSPO3Q9BXY4 TMEM246-203ENST00000374851 5070 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
RSPO3Q9BXY4 LINC01776-201ENST00000418344 2229 ntTSL 2 BASIC6.38□□□□□ -1.39
RSPO3Q9BXY4 MME-203ENST00000460393 5622 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
RSPO3Q9BXY4 HYDIN2-203ENST00000614586 13885 ntBASIC6.38□□□□□ -1.39
RSPO3Q9BXY4 CHST12-201ENST00000258711 15979 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
RSPO3Q9BXY4 CD96-201ENST00000283285 4324 ntAPPRIS P4 TSL 1 (best) BASIC6.38□□□□□ -1.39
RSPO3Q9BXY4 SLC35A3-207ENST00000533028 14759 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
RSPO3Q9BXY4 KCNN3-201ENST00000271915 13033 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
RSPO3Q9BXY4 ENTPD1-205ENST00000453258 5044 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
RSPO3Q9BXY4 AMD1-203ENST00000368882 3059 ntTSL 2 BASIC6.38□□□□□ -1.39
RSPO3Q9BXY4 LRRC37A2-201ENST00000333412 5177 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
RSPO3Q9BXY4 SALL4P7-201ENST00000555779 3120 ntBASIC6.38□□□□□ -1.39
RSPO3Q9BXY4 DPY19L3-202ENST00000392250 5998 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
RSPO3Q9BXY4 RNU1-24P-201ENST00000364285 165 ntBASIC6.38□□□□□ -1.39
RSPO3Q9BXY4 DEFB121-202ENST00000376314 389 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
RSPO3Q9BXY4 NPM1P31-201ENST00000399021 764 ntBASIC6.38□□□□□ -1.39
RSPO3Q9BXY4 RNU4ATAC2P-201ENST00000408674 126 ntBASIC6.38□□□□□ -1.39
RSPO3Q9BXY4 MKX-AS1-201ENST00000412244 745 ntTSL 3 BASIC6.38□□□□□ -1.39
RSPO3Q9BXY4 AC012451.1-201ENST00000412312 357 ntTSL 3 BASIC6.38□□□□□ -1.39
RSPO3Q9BXY4 LINC01704-201ENST00000414848 834 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
RSPO3Q9BXY4 PPIL1P1-201ENST00000423936 499 ntBASIC6.38□□□□□ -1.39
RSPO3Q9BXY4 DLEU1-AS1-201ENST00000428276 731 ntTSL 3 BASIC6.38□□□□□ -1.39
RSPO3Q9BXY4 DSCAM-IT1-201ENST00000440363 720 ntTSL 3 BASIC6.38□□□□□ -1.39
RSPO3Q9BXY4 AC007064.2-201ENST00000442403 500 ntTSL 5 BASIC6.38□□□□□ -1.39
RSPO3Q9BXY4 SNORA35.1-201ENST00000458908 128 ntBASIC6.38□□□□□ -1.39
RSPO3Q9BXY4 AC079193.1-201ENST00000460497 588 ntBASIC6.38□□□□□ -1.39
RSPO3Q9BXY4 AC018475.1-201ENST00000478358 465 ntBASIC6.38□□□□□ -1.39
RSPO3Q9BXY4 AC018639.1-201ENST00000492994 442 ntBASIC6.38□□□□□ -1.39
RSPO3Q9BXY4 AC026826.1-201ENST00000493002 361 ntBASIC6.38□□□□□ -1.39
RSPO3Q9BXY4 AC008770.1-202ENST00000495324 516 ntTSL 2 BASIC6.38□□□□□ -1.39
RSPO3Q9BXY4 RN7SKP11-201ENST00000517018 287 ntBASIC6.38□□□□□ -1.39
RSPO3Q9BXY4 RN7SKP98-201ENST00000517070 156 ntBASIC6.38□□□□□ -1.39
RSPO3Q9BXY4 IGLVV-66-201ENST00000523818 341 ntBASIC6.38□□□□□ -1.39
RSPO3Q9BXY4 HNRNPCP8-201ENST00000528764 888 ntBASIC6.38□□□□□ -1.39
RSPO3Q9BXY4 OR4A13P-201ENST00000529316 942 ntBASIC6.38□□□□□ -1.39
RSPO3Q9BXY4 PCED1B-AS1-207ENST00000551432 522 ntTSL 5 BASIC6.38□□□□□ -1.39
RSPO3Q9BXY4 CTSLP2-201ENST00000580501 394 ntBASIC6.38□□□□□ -1.39
RSPO3Q9BXY4 AC021506.1-201ENST00000581971 597 ntTSL 5 BASIC6.38□□□□□ -1.39
RSPO3Q9BXY4 AC005546.1-201ENST00000591837 391 ntTSL 3 BASIC6.38□□□□□ -1.39
RSPO3Q9BXY4 AC008734.1-201ENST00000594006 537 ntTSL 2 BASIC6.38□□□□□ -1.39
RSPO3Q9BXY4 SIGLEC31P-201ENST00000594237 551 ntBASIC6.38□□□□□ -1.39
RSPO3Q9BXY4 PRR13P5-201ENST00000596581 442 ntBASIC6.38□□□□□ -1.39
RSPO3Q9BXY4 Z99129.3-201ENST00000624363 6430 ntTSL 2 BASIC6.38□□□□□ -1.39
RSPO3Q9BXY4 MDM4-215ENST00000614459 9782 ntTSL 5 BASIC6.38□□□□□ -1.39
RSPO3Q9BXY4 RBMY1A3P-201ENST00000382670 1404 ntBASIC6.38□□□□□ -1.39
RSPO3Q9BXY4 CREM-216ENST00000429130 1476 ntTSL 5 BASIC6.38□□□□□ -1.39
RSPO3Q9BXY4 AQP4-205ENST00000581374 1586 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
RSPO3Q9BXY4 SLC22A25-201ENST00000306494 1692 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
RSPO3Q9BXY4 AKAP6-213ENST00000557354 5259 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
RSPO3Q9BXY4 OR2L13-203ENST00000641893 1817 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
RSPO3Q9BXY4 MYCBP2-201ENST00000357337 14736 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
RSPO3Q9BXY4 PDGFRA-206ENST00000508170 2202 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
RSPO3Q9BXY4 AC100810.3-201ENST00000633189 2240 ntBASIC6.38□□□□□ -1.39
RSPO3Q9BXY4 AGL-201ENST00000294724 7446 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
RSPO3Q9BXY4 AC022905.1-201ENST00000503430 3048 ntBASIC6.38□□□□□ -1.39
RSPO3Q9BXY4 OR2T2-202ENST00000641925 3530 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
RSPO3Q9BXY4 FMN1-211ENST00000561249 4251 ntAPPRIS ALT2 TSL 5 BASIC6.38□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 137.4 ms