Protein–RNA interactions for Protein: X5D2U9

HLA-DRB4, HLA class II histocompatibility antigen, DR beta 4 chain, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB4X5D2U9 AC068802.1-201ENST00000603420 732 ntBASIC5.38□□□□□ -1.55
HLA-DRB4X5D2U9 PRR13P3-201ENST00000603578 376 ntBASIC5.38□□□□□ -1.55
HLA-DRB4X5D2U9 RN7SL778P-201ENST00000607160 297 ntBASIC5.38□□□□□ -1.55
HLA-DRB4X5D2U9 AC061709.1-202ENST00000615029 527 ntTSL 3 BASIC5.38□□□□□ -1.55
HLA-DRB4X5D2U9 AC068234.2-201ENST00000619646 522 ntBASIC5.38□□□□□ -1.55
HLA-DRB4X5D2U9 AC012629.3-201ENST00000623397 328 ntBASIC5.38□□□□□ -1.55
HLA-DRB4X5D2U9 AL353572.3-201ENST00000636536 670 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
HLA-DRB4X5D2U9 AC002115.2-201ENST00000640449 603 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
HLA-DRB4X5D2U9 NUP43-201ENST00000340413 3874 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
HLA-DRB4X5D2U9 CHRM5-201ENST00000383263 5410 ntAPPRIS P1 TSL 2 BASIC5.38□□□□□ -1.55
HLA-DRB4X5D2U9 NSD3-206ENST00000527502 4471 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
HLA-DRB4X5D2U9 RRM2-213ENST00000641198 3431 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
HLA-DRB4X5D2U9 ZNF559-ZNF177-203ENST00000541595 2435 ntAPPRIS P3 TSL 2 BASIC5.38□□□□□ -1.55
HLA-DRB4X5D2U9 AP002026.1-201ENST00000500358 4825 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
HLA-DRB4X5D2U9 RBMY1A3P-201ENST00000382670 1404 ntBASIC5.38□□□□□ -1.55
HLA-DRB4X5D2U9 RUFY2-201ENST00000265865 2033 ntTSL 2 BASIC5.38□□□□□ -1.55
HLA-DRB4X5D2U9 SERPINA11-201ENST00000334708 1476 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
HLA-DRB4X5D2U9 OR2M3-202ENST00000641626 9913 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
HLA-DRB4X5D2U9 POT1-AS1-203ENST00000435452 2147 ntTSL 2 BASIC5.38□□□□□ -1.55
HLA-DRB4X5D2U9 DCLRE1C-211ENST00000396817 2761 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
HLA-DRB4X5D2U9 NACAP1-201ENST00000419462 1555 ntTSL 2 BASIC5.38□□□□□ -1.55
HLA-DRB4X5D2U9 OR2J2-203ENST00000641417 2392 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
HLA-DRB4X5D2U9 GFPT1-202ENST00000361060 8632 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
HLA-DRB4X5D2U9 NOX1-201ENST00000217885 1734 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
HLA-DRB4X5D2U9 VNN3-202ENST00000367927 1717 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
HLA-DRB4X5D2U9 SLC14A1-221ENST00000619403 3823 ntTSL 5 BASIC5.37□□□□□ -1.55
HLA-DRB4X5D2U9 FAM135A-207ENST00000457062 5282 ntAPPRIS P3 TSL 1 (best) BASIC5.37□□□□□ -1.55
HLA-DRB4X5D2U9 MEF2C-249ENST00000637481 6088 ntTSL 5 BASIC5.37□□□□□ -1.55
HLA-DRB4X5D2U9 ARHGAP12-204ENST00000375250 4914 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
HLA-DRB4X5D2U9 SEC62-201ENST00000337002 6568 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
HLA-DRB4X5D2U9 TRIP12-201ENST00000283943 9874 ntAPPRIS P3 TSL 1 (best) BASIC5.37□□□□□ -1.55
HLA-DRB4X5D2U9 AC113146.2-201ENST00000560743 1961 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
HLA-DRB4X5D2U9 RRN3-202ENST00000327307 2039 ntTSL 2 BASIC5.37□□□□□ -1.55
HLA-DRB4X5D2U9 VNN3-201ENST00000275223 1260 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
HLA-DRB4X5D2U9 INSL5-201ENST00000304526 715 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
HLA-DRB4X5D2U9 OR10A3-201ENST00000360759 1061 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
HLA-DRB4X5D2U9 RN7SKP1-201ENST00000365525 307 ntBASIC5.37□□□□□ -1.55
HLA-DRB4X5D2U9 C1orf162-202ENST00000369718 915 ntAPPRIS ALT2 TSL 2 BASIC5.37□□□□□ -1.55
HLA-DRB4X5D2U9 TRBV25-1-202ENST00000390398 381 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
HLA-DRB4X5D2U9 IGBP1-AS2-201ENST00000403371 513 ntTSL 3 BASIC5.37□□□□□ -1.55
HLA-DRB4X5D2U9 RNU4-64P-201ENST00000410795 131 ntBASIC5.37□□□□□ -1.55
HLA-DRB4X5D2U9 AC017035.1-201ENST00000411999 1115 ntBASIC5.37□□□□□ -1.55
HLA-DRB4X5D2U9 AC012462.2-201ENST00000414756 391 ntTSL 3 BASIC5.37□□□□□ -1.55
HLA-DRB4X5D2U9 TBX18-AS1-201ENST00000423086 421 ntTSL 3 BASIC5.37□□□□□ -1.55
HLA-DRB4X5D2U9 LMLN-AS1-201ENST00000423460 542 ntTSL 5 BASIC5.37□□□□□ -1.55
HLA-DRB4X5D2U9 PPIL1P1-201ENST00000423936 499 ntBASIC5.37□□□□□ -1.55
HLA-DRB4X5D2U9 AC099796.1-201ENST00000433377 683 ntTSL 3 BASIC5.37□□□□□ -1.55
HLA-DRB4X5D2U9 AC079781.1-201ENST00000441505 394 ntBASIC5.37□□□□□ -1.55
HLA-DRB4X5D2U9 AL139135.2-201ENST00000445040 433 ntBASIC5.37□□□□□ -1.55
HLA-DRB4X5D2U9 AL358612.1-201ENST00000452911 481 ntTSL 3 BASIC5.37□□□□□ -1.55
HLA-DRB4X5D2U9 CXCR6-203ENST00000457814 1184 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
HLA-DRB4X5D2U9 AL049650.1-201ENST00000461548 823 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
HLA-DRB4X5D2U9 AC139769.1-201ENST00000471224 1001 ntTSL 3 BASIC5.37□□□□□ -1.55
HLA-DRB4X5D2U9 AC073842.2-201ENST00000494221 572 ntTSL 4 BASIC5.37□□□□□ -1.55
HLA-DRB4X5D2U9 CPNE4-202ENST00000502818 2120 ntTSL 5 BASIC5.37□□□□□ -1.55
HLA-DRB4X5D2U9 LINC01182-201ENST00000503532 582 ntTSL 4 BASIC5.37□□□□□ -1.55
HLA-DRB4X5D2U9 AC110760.2-202ENST00000507517 946 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
HLA-DRB4X5D2U9 C4orf19-203ENST00000508175 828 ntTSL 3 BASIC5.37□□□□□ -1.55
HLA-DRB4X5D2U9 AC146944.3-201ENST00000509969 371 ntBASIC5.37□□□□□ -1.55
HLA-DRB4X5D2U9 AC008417.1-201ENST00000510014 565 ntBASIC5.37□□□□□ -1.55
HLA-DRB4X5D2U9 AC105999.2-203ENST00000521030 663 ntTSL 3 BASIC5.37□□□□□ -1.55
HLA-DRB4X5D2U9 AP003119.2-201ENST00000528075 336 ntTSL 3 BASIC5.37□□□□□ -1.55
HLA-DRB4X5D2U9 LINC00678-202ENST00000534757 798 ntTSL 3 BASIC5.37□□□□□ -1.55
HLA-DRB4X5D2U9 ATP5J2P4-201ENST00000538774 267 ntBASIC5.37□□□□□ -1.55
HLA-DRB4X5D2U9 VDAC2P2-201ENST00000544463 901 ntBASIC5.37□□□□□ -1.55
HLA-DRB4X5D2U9 HNRNPA1P71-201ENST00000559135 950 ntBASIC5.37□□□□□ -1.55
HLA-DRB4X5D2U9 NR2F2-AS1-209ENST00000560800 549 ntTSL 4 BASIC5.37□□□□□ -1.55
HLA-DRB4X5D2U9 AC011487.2-201ENST00000600193 1228 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
HLA-DRB4X5D2U9 AC007785.3-202ENST00000601033 518 ntTSL 3 BASIC5.37□□□□□ -1.55
HLA-DRB4X5D2U9 AL023806.2-201ENST00000603042 263 ntBASIC5.37□□□□□ -1.55
HLA-DRB4X5D2U9 AC137695.2-201ENST00000603123 754 ntBASIC5.37□□□□□ -1.55
HLA-DRB4X5D2U9 AL049829.3-202ENST00000604278 711 ntBASIC5.37□□□□□ -1.55
HLA-DRB4X5D2U9 AC104117.5-201ENST00000606195 547 ntBASIC5.37□□□□□ -1.55
HLA-DRB4X5D2U9 AL139123.1-201ENST00000612008 430 ntBASIC5.37□□□□□ -1.55
HLA-DRB4X5D2U9 HOTTIP_2.1-201ENST00000616633 376 ntBASIC5.37□□□□□ -1.55
HLA-DRB4X5D2U9 LAMTOR5-AS1-248ENST00000630488 703 ntTSL 5 BASIC5.37□□□□□ -1.55
HLA-DRB4X5D2U9 AC104073.4-201ENST00000632111 598 ntTSL 2 BASIC5.37□□□□□ -1.55
HLA-DRB4X5D2U9 AL009031.1-201ENST00000632346 1026 ntTSL 2 BASIC5.37□□□□□ -1.55
HLA-DRB4X5D2U9 AC073488.7-201ENST00000633785 778 ntBASIC5.37□□□□□ -1.55
HLA-DRB4X5D2U9 AL513321.2-202ENST00000634479 921 ntTSL 5 BASIC5.37□□□□□ -1.55
HLA-DRB4X5D2U9 LINC01427-203ENST00000635277 781 ntTSL 5 BASIC5.37□□□□□ -1.55
HLA-DRB4X5D2U9 CASC19-232ENST00000641480 1244 ntBASIC5.37□□□□□ -1.55
HLA-DRB4X5D2U9 EHHADH-201ENST00000231887 3850 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
HLA-DRB4X5D2U9 CS-212ENST00000548567 3057 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
HLA-DRB4X5D2U9 SOS2-202ENST00000543680 3960 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
HLA-DRB4X5D2U9 MEPE-204ENST00000497649 2226 ntAPPRIS ALT2 TSL 5 BASIC5.37□□□□□ -1.55
HLA-DRB4X5D2U9 ZG16-201ENST00000400752 3132 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
HLA-DRB4X5D2U9 TBC1D19-205ENST00000511789 1386 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
HLA-DRB4X5D2U9 KIF20A-201ENST00000394894 3201 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
HLA-DRB4X5D2U9 SPRY1-201ENST00000339241 2348 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
HLA-DRB4X5D2U9 PCDH11Y-204ENST00000400457 9039 ntAPPRIS P5 TSL 1 (best) BASIC5.37□□□□□ -1.55
HLA-DRB4X5D2U9 S100Z-201ENST00000317593 1468 ntAPPRIS P1 TSL 3 BASIC5.37□□□□□ -1.55
HLA-DRB4X5D2U9 DCP1B-205ENST00000540622 1547 ntTSL 5 BASIC5.37□□□□□ -1.55
HLA-DRB4X5D2U9 CTNND1-212ENST00000525902 4984 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
HLA-DRB4X5D2U9 CTNND1-214ENST00000526772 4966 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
HLA-DRB4X5D2U9 FLRT3-201ENST00000341420 3971 ntAPPRIS P1 TSL 2 BASIC5.37□□□□□ -1.55
HLA-DRB4X5D2U9 AC007938.1-201ENST00000562524 2902 ntBASIC5.37□□□□□ -1.55
HLA-DRB4X5D2U9 SNX18P3-202ENST00000565670 1750 ntBASIC5.37□□□□□ -1.55
HLA-DRB4X5D2U9 LRRTM4-205ENST00000409911 2976 ntAPPRIS ALT1 TSL 5 BASIC5.37□□□□□ -1.55
HLA-DRB4X5D2U9 ARHGAP32-201ENST00000310343 10111 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 85 ms