Protein–RNA interactions for Protein: Q96SN8

CDK5RAP2, CDK5 regulatory subunit-associated protein 2, humanhuman

Predictions only

Length 1,893 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP2Q96SN8 ATXN7L1-202ENST00000419735 5417 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
CDK5RAP2Q96SN8 PDE4B-203ENST00000371045 3982 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
CDK5RAP2Q96SN8 RACGAP1P-201ENST00000550663 1879 ntBASIC8.1□□□□□ -1.11
CDK5RAP2Q96SN8 TRIM66-202ENST00000402157 10086 ntAPPRIS P5 TSL 5 BASIC8.1□□□□□ -1.11
CDK5RAP2Q96SN8 MYO5C-201ENST00000261839 6971 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
CDK5RAP2Q96SN8 RBM41-201ENST00000372479 1662 ntAPPRIS P3 TSL 1 (best) BASIC8.1□□□□□ -1.11
CDK5RAP2Q96SN8 PTPRR-202ENST00000342084 2037 ntAPPRIS ALT2 TSL 2 BASIC8.1□□□□□ -1.11
CDK5RAP2Q96SN8 AC019117.1-201ENST00000636929 1462 ntTSL 5 BASIC8.1□□□□□ -1.11
CDK5RAP2Q96SN8 RN7SKP184-201ENST00000362348 333 ntBASIC8.1□□□□□ -1.11
CDK5RAP2Q96SN8 AC010148.1-201ENST00000427619 707 ntTSL 3 BASIC8.1□□□□□ -1.11
CDK5RAP2Q96SN8 AL355607.1-201ENST00000427745 295 ntTSL 3 BASIC8.1□□□□□ -1.11
CDK5RAP2Q96SN8 DEFA11P-201ENST00000446470 261 ntBASIC8.1□□□□□ -1.11
CDK5RAP2Q96SN8 AL050331.2-201ENST00000457319 421 ntTSL 3 BASIC8.1□□□□□ -1.11
CDK5RAP2Q96SN8 AP003385.3-201ENST00000472498 287 ntBASIC8.1□□□□□ -1.11
CDK5RAP2Q96SN8 QTRT2-209ENST00000479882 1196 ntTSL 2 BASIC8.1□□□□□ -1.11
CDK5RAP2Q96SN8 SCG5-207ENST00000497208 949 ntTSL 5 BASIC8.1□□□□□ -1.11
CDK5RAP2Q96SN8 AC109588.1-201ENST00000507759 726 ntTSL 3 BASIC8.1□□□□□ -1.11
CDK5RAP2Q96SN8 AC008957.1-203ENST00000508745 589 ntTSL 3 BASIC8.1□□□□□ -1.11
CDK5RAP2Q96SN8 AC016813.1-201ENST00000521511 735 ntTSL 3 BASIC8.1□□□□□ -1.11
CDK5RAP2Q96SN8 AC023827.2-201ENST00000566880 1061 ntBASIC8.1□□□□□ -1.11
CDK5RAP2Q96SN8 GTF2IP6-201ENST00000583143 541 ntBASIC8.1□□□□□ -1.11
CDK5RAP2Q96SN8 AC025809.1-201ENST00000585336 560 ntTSL 4 BASIC8.1□□□□□ -1.11
CDK5RAP2Q96SN8 TTN-AS1-226ENST00000588716 604 ntTSL 5 BASIC8.1□□□□□ -1.11
CDK5RAP2Q96SN8 AC011498.1-203ENST00000589066 359 ntTSL 3 BASIC8.1□□□□□ -1.11
CDK5RAP2Q96SN8 AC008752.2-201ENST00000591174 750 ntTSL 3 BASIC8.1□□□□□ -1.11
CDK5RAP2Q96SN8 DIMT1P1-201ENST00000603970 763 ntBASIC8.1□□□□□ -1.11
CDK5RAP2Q96SN8 GLYATL1-219ENST00000612196 909 ntAPPRIS ALT2 TSL 1 (best) BASIC8.1□□□□□ -1.11
CDK5RAP2Q96SN8 Metazoa_SRP.129-201ENST00000619776 251 ntBASIC8.1□□□□□ -1.11
CDK5RAP2Q96SN8 ZNF37A-201ENST00000351773 7027 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
CDK5RAP2Q96SN8 LYSMD3-201ENST00000315948 4259 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
CDK5RAP2Q96SN8 PSG6-204ENST00000402603 1412 ntTSL 5 BASIC8.1□□□□□ -1.11
CDK5RAP2Q96SN8 IRAK4-214ENST00000613694 4280 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
CDK5RAP2Q96SN8 AC104837.1-201ENST00000444644 1587 ntBASIC8.1□□□□□ -1.11
CDK5RAP2Q96SN8 HNRNPU-223ENST00000640001 4227 ntTSL 5 BASIC8.1□□□□□ -1.11
CDK5RAP2Q96SN8 LRRC8B-206ENST00000640258 8034 ntAPPRIS P1 TSL 5 BASIC8.1□□□□□ -1.11
CDK5RAP2Q96SN8 PIGP-202ENST00000360525 6998 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
CDK5RAP2Q96SN8 CD300E-201ENST00000392619 3501 ntAPPRIS P2 TSL 1 (best) BASIC8.09□□□□□ -1.11
CDK5RAP2Q96SN8 FDFT1-208ENST00000525777 1472 ntTSL 2 BASIC8.09□□□□□ -1.11
CDK5RAP2Q96SN8 AC233728.1-201ENST00000418049 218 ntTSL 5 BASIC8.09□□□□□ -1.11
CDK5RAP2Q96SN8 QKI-206ENST00000424802 954 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
CDK5RAP2Q96SN8 ZNF69-202ENST00000429654 2010 ntAPPRIS P1 TSL 2 BASIC8.09□□□□□ -1.11
CDK5RAP2Q96SN8 AC093870.1-201ENST00000506837 213 ntBASIC8.09□□□□□ -1.11
CDK5RAP2Q96SN8 AC018797.1-201ENST00000510791 255 ntBASIC8.09□□□□□ -1.11
CDK5RAP2Q96SN8 AC011352.2-201ENST00000514574 1016 ntBASIC8.09□□□□□ -1.11
CDK5RAP2Q96SN8 AC008708.1-201ENST00000517346 474 ntTSL 3 BASIC8.09□□□□□ -1.11
CDK5RAP2Q96SN8 AC245052.7-201ENST00000601161 359 ntBASIC8.09□□□□□ -1.11
CDK5RAP2Q96SN8 BLOC1S2-206ENST00000618916 2470 ntTSL 5 BASIC8.09□□□□□ -1.11
CDK5RAP2Q96SN8 RMDN2-AS1-207ENST00000627614 765 ntTSL 5 BASIC8.09□□□□□ -1.11
CDK5RAP2Q96SN8 FARP1-219ENST00000596580 13532 ntTSL 5 BASIC8.09□□□□□ -1.11
CDK5RAP2Q96SN8 ZNF322-201ENST00000415922 4817 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
CDK5RAP2Q96SN8 ESRP1-204ENST00000454170 3482 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
CDK5RAP2Q96SN8 MS4A7-202ENST00000358246 2871 ntTSL 3 BASIC8.09□□□□□ -1.11
CDK5RAP2Q96SN8 MYT1L-202ENST00000399161 7063 ntAPPRIS ALT2 TSL 1 (best) BASIC8.09□□□□□ -1.11
CDK5RAP2Q96SN8 Z97832.2-201ENST00000605896 4261 ntBASIC8.09□□□□□ -1.11
CDK5RAP2Q96SN8 ATP7B-206ENST00000448424 6404 ntAPPRIS ALT2 TSL 1 (best) BASIC8.09□□□□□ -1.11
CDK5RAP2Q96SN8 FNDC3A-204ENST00000492622 6286 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
CDK5RAP2Q96SN8 AC062029.1-202ENST00000606164 3651 ntBASIC8.09□□□□□ -1.11
CDK5RAP2Q96SN8 TMEM200A-203ENST00000545622 2918 ntAPPRIS P1 TSL 2 BASIC8.09□□□□□ -1.11
CDK5RAP2Q96SN8 ZNF23-204ENST00000428724 1932 ntAPPRIS P3 TSL 1 (best) BASIC8.09□□□□□ -1.11
CDK5RAP2Q96SN8 DOCK1-206ENST00000623213 5761 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
CDK5RAP2Q96SN8 SPATA31C2-201ENST00000324915 3777 ntBASIC8.09□□□□□ -1.11
CDK5RAP2Q96SN8 KCNIP4-201ENST00000359001 2168 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
CDK5RAP2Q96SN8 FAM168A-201ENST00000064778 7296 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
CDK5RAP2Q96SN8 ZNF770-201ENST00000356321 5439 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
CDK5RAP2Q96SN8 ALDH1A1-201ENST00000297785 2107 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
CDK5RAP2Q96SN8 OR4C1P-202ENST00000641065 1569 ntBASIC8.09□□□□□ -1.11
CDK5RAP2Q96SN8 LRRC37B-220ENST00000584368 2773 ntTSL 1 (best) BASIC8.09□□□□□ -1.12
CDK5RAP2Q96SN8 AC107977.1-201ENST00000355745 939 ntBASIC8.09□□□□□ -1.12
CDK5RAP2Q96SN8 RN7SKP171-201ENST00000364417 303 ntBASIC8.09□□□□□ -1.12
CDK5RAP2Q96SN8 NQO1-202ENST00000379046 1105 ntTSL 1 (best) BASIC8.09□□□□□ -1.12
CDK5RAP2Q96SN8 FGF13-AS1-201ENST00000438238 849 ntTSL 1 (best) BASIC8.09□□□□□ -1.12
CDK5RAP2Q96SN8 AC092601.1-201ENST00000444526 383 ntBASIC8.09□□□□□ -1.12
CDK5RAP2Q96SN8 SDHCP3-201ENST00000445371 506 ntBASIC8.09□□□□□ -1.12
CDK5RAP2Q96SN8 AL035420.1-202ENST00000450129 357 ntTSL 3 BASIC8.09□□□□□ -1.12
CDK5RAP2Q96SN8 RN7SL39P-201ENST00000462264 297 ntBASIC8.09□□□□□ -1.12
CDK5RAP2Q96SN8 MARK2P8-201ENST00000476069 952 ntBASIC8.09□□□□□ -1.12
CDK5RAP2Q96SN8 OR7E22P-201ENST00000478335 1035 ntBASIC8.09□□□□□ -1.12
CDK5RAP2Q96SN8 FBXO16-208ENST00000519471 398 ntTSL 2 BASIC8.09□□□□□ -1.12
CDK5RAP2Q96SN8 AL049836.2-201ENST00000553318 513 ntTSL 5 BASIC8.09□□□□□ -1.12
CDK5RAP2Q96SN8 AC090527.1-201ENST00000557965 431 ntTSL 3 BASIC8.09□□□□□ -1.12
CDK5RAP2Q96SN8 AC013652.2-202ENST00000558948 910 ntTSL 3 BASIC8.09□□□□□ -1.12
CDK5RAP2Q96SN8 AC091133.5-201ENST00000603088 301 ntBASIC8.09□□□□□ -1.12
CDK5RAP2Q96SN8 uc_338.29-201ENST00000615099 168 ntBASIC8.09□□□□□ -1.12
CDK5RAP2Q96SN8 AC112719.2-201ENST00000501239 1685 ntTSL 1 (best) BASIC8.09□□□□□ -1.12
CDK5RAP2Q96SN8 SLC16A4-210ENST00000541986 2496 ntTSL 2 BASIC8.08□□□□□ -1.12
CDK5RAP2Q96SN8 CEP97-206ENST00000494050 2870 ntAPPRIS ALT2 TSL 2 BASIC8.08□□□□□ -1.12
CDK5RAP2Q96SN8 KIF27-204ENST00000413982 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC8.08□□□□□ -1.12
CDK5RAP2Q96SN8 PLCH1-206ENST00000494598 3525 ntTSL 5 BASIC8.08□□□□□ -1.12
CDK5RAP2Q96SN8 ZNF763-202ENST00000358987 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC8.08□□□□□ -1.12
CDK5RAP2Q96SN8 API5P1-201ENST00000424316 1510 ntBASIC8.08□□□□□ -1.12
CDK5RAP2Q96SN8 CREM-208ENST00000361599 2170 ntTSL 5 BASIC8.08□□□□□ -1.12
CDK5RAP2Q96SN8 PAX6-209ENST00000419022 6888 ntAPPRIS P4 TSL 1 (best) BASIC8.08□□□□□ -1.12
CDK5RAP2Q96SN8 OR14A16-202ENST00000641093 1367 ntAPPRIS P1 BASIC8.08□□□□□ -1.12
CDK5RAP2Q96SN8 ZNFX1-204ENST00000396105 7371 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
CDK5RAP2Q96SN8 SYNJ1-203ENST00000382499 7094 ntAPPRIS ALT2 TSL 1 (best) BASIC8.08□□□□□ -1.12
CDK5RAP2Q96SN8 LINC02197-201ENST00000502659 2767 ntTSL 2 BASIC8.08□□□□□ -1.12
CDK5RAP2Q96SN8 ANKRD44-202ENST00000328737 3686 ntTSL 2 BASIC8.08□□□□□ -1.12
CDK5RAP2Q96SN8 DGKB-206ENST00000407950 3651 ntTSL 5 BASIC8.08□□□□□ -1.12
CDK5RAP2Q96SN8 POGZ-201ENST00000271715 6626 ntAPPRIS P3 TSL 1 (best) BASIC8.08□□□□□ -1.12
CDK5RAP2Q96SN8 CABYR-216ENST00000621648 2226 ntAPPRIS P4 TSL 1 (best) BASIC8.08□□□□□ -1.12
Retrieved 100 of 98,524 protein–RNA pairs in 83 ms