Protein–RNA interactions for Protein: Q96GC9

VMP1, Vacuole membrane protein 1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1Q96GC9 IGKV1OR10-1-201ENST00000442306 329 ntBASIC7□□□□□ -1.29
VMP1Q96GC9 VN1R96P-201ENST00000446052 858 ntBASIC7□□□□□ -1.29
VMP1Q96GC9 AF015262.1-201ENST00000455028 698 ntTSL 3 BASIC7□□□□□ -1.29
VMP1Q96GC9 IGKV1OR22-5-201ENST00000458718 354 ntBASIC7□□□□□ -1.29
VMP1Q96GC9 RN7SL516P-201ENST00000496127 297 ntBASIC7□□□□□ -1.29
VMP1Q96GC9 AC098487.1-204ENST00000506972 610 ntTSL 3 BASIC7□□□□□ -1.29
VMP1Q96GC9 C4orf19-203ENST00000508175 828 ntTSL 3 BASIC7□□□□□ -1.29
VMP1Q96GC9 LDHC-203ENST00000535809 757 ntTSL 5 BASIC7□□□□□ -1.29
VMP1Q96GC9 LDHC-204ENST00000536880 957 ntTSL 5 BASIC7□□□□□ -1.29
VMP1Q96GC9 LDHC-205ENST00000537486 583 ntTSL 5 BASIC7□□□□□ -1.29
VMP1Q96GC9 AC084880.4-201ENST00000538405 577 ntTSL 2 BASIC7□□□□□ -1.29
VMP1Q96GC9 AC044860.3-201ENST00000559957 368 ntBASIC7□□□□□ -1.29
VMP1Q96GC9 AC099518.1-201ENST00000568032 841 ntTSL 3 BASIC7□□□□□ -1.29
VMP1Q96GC9 AP005230.1-203ENST00000582086 887 ntTSL 2 BASIC7□□□□□ -1.29
VMP1Q96GC9 AL583832.1-201ENST00000603227 784 ntBASIC7□□□□□ -1.29
VMP1Q96GC9 MIR205HG-210ENST00000603283 455 ntTSL 3 BASIC7□□□□□ -1.29
VMP1Q96GC9 AL589743.4-201ENST00000610763 586 ntTSL 5 BASIC7□□□□□ -1.29
VMP1Q96GC9 IQCA1-204ENST00000409907 3281 ntAPPRIS P3 TSL 1 (best) BASIC7□□□□□ -1.29
VMP1Q96GC9 DYNC1I2-202ENST00000397119 2604 ntTSL 1 (best) BASIC7□□□□□ -1.29
VMP1Q96GC9 PCDH18-202ENST00000412923 5102 ntAPPRIS ALT1 TSL 1 (best) BASIC7□□□□□ -1.29
VMP1Q96GC9 KLHL4-201ENST00000373114 2445 ntTSL 1 (best) BASIC7□□□□□ -1.29
VMP1Q96GC9 AC079248.1-201ENST00000427568 1546 ntBASIC7□□□□□ -1.29
VMP1Q96GC9 ANGPT1-206ENST00000520734 1526 ntTSL 2 BASIC7□□□□□ -1.29
VMP1Q96GC9 GRIK2-205ENST00000369138 4921 ntTSL 1 (best) BASIC7□□□□□ -1.29
VMP1Q96GC9 OAS2-202ENST00000392583 4734 ntAPPRIS ALT2 TSL 1 (best) BASIC7□□□□□ -1.29
VMP1Q96GC9 CHN1-204ENST00000409597 1445 ntTSL 3 BASIC7□□□□□ -1.29
VMP1Q96GC9 PAPD4-203ENST00000428308 2204 ntAPPRIS P3 TSL 2 BASIC7□□□□□ -1.29
VMP1Q96GC9 ZNF585A-201ENST00000292841 8618 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
VMP1Q96GC9 GPR19-203ENST00000540510 1751 ntAPPRIS P1 TSL 2 BASIC7□□□□□ -1.29
VMP1Q96GC9 AC116158.1-201ENST00000560231 2129 ntBASIC7□□□□□ -1.29
VMP1Q96GC9 AMZ2-210ENST00000580753 1339 ntAPPRIS P1 TSL 5 BASIC7□□□□□ -1.29
VMP1Q96GC9 LINC02511-201ENST00000505736 1668 ntTSL 5 BASIC7□□□□□ -1.29
VMP1Q96GC9 FOXM1-202ENST00000359843 3315 ntAPPRIS P4 TSL 1 (best) BASIC6.99□□□□□ -1.29
VMP1Q96GC9 AC007923.2-201ENST00000584218 1591 ntBASIC6.99□□□□□ -1.29
VMP1Q96GC9 OR4C1P-202ENST00000641065 1569 ntBASIC6.99□□□□□ -1.29
VMP1Q96GC9 SF3A3P1-201ENST00000446317 1477 ntBASIC6.99□□□□□ -1.29
VMP1Q96GC9 G3BP2-203ENST00000395719 4217 ntAPPRIS P4 TSL 1 (best) BASIC6.99□□□□□ -1.29
VMP1Q96GC9 BRDT-202ENST00000362005 3409 ntAPPRIS P3 TSL 1 (best) BASIC6.99□□□□□ -1.29
VMP1Q96GC9 AL359694.2-201ENST00000567753 1615 ntBASIC6.99□□□□□ -1.29
VMP1Q96GC9 PAPOLG-201ENST00000238714 4263 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
VMP1Q96GC9 MPDZ-219ENST00000546205 6342 ntAPPRIS ALT2 TSL 5 BASIC6.99□□□□□ -1.29
VMP1Q96GC9 ZC3H11A-202ENST00000367210 5877 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
VMP1Q96GC9 PRKAA1-201ENST00000296800 1134 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
VMP1Q96GC9 RNU1-122P-201ENST00000365538 156 ntBASIC6.99□□□□□ -1.29
VMP1Q96GC9 OR6C1-201ENST00000379668 1064 ntAPPRIS P1 BASIC6.99□□□□□ -1.29
VMP1Q96GC9 ASPH-204ENST00000389204 1290 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
VMP1Q96GC9 NDUFV2-202ENST00000400033 942 ntTSL 3 BASIC6.99□□□□□ -1.29
VMP1Q96GC9 AC090617.1-201ENST00000413674 323 ntTSL 2 BASIC6.99□□□□□ -1.29
VMP1Q96GC9 PPIAP30-201ENST00000415473 519 ntBASIC6.99□□□□□ -1.29
VMP1Q96GC9 RPL34P19-201ENST00000415903 342 ntBASIC6.99□□□□□ -1.29
VMP1Q96GC9 XIST-201ENST00000416330 750 ntTSL 2 BASIC6.99□□□□□ -1.29
VMP1Q96GC9 LINC01715-201ENST00000420776 624 ntTSL 2 BASIC6.99□□□□□ -1.29
VMP1Q96GC9 RPL6P2-201ENST00000425480 783 ntBASIC6.99□□□□□ -1.29
VMP1Q96GC9 AC005487.1-201ENST00000440208 665 ntTSL 5 BASIC6.99□□□□□ -1.29
VMP1Q96GC9 DEFA11P-201ENST00000446470 261 ntBASIC6.99□□□□□ -1.29
VMP1Q96GC9 AC092570.2-201ENST00000452117 1143 ntBASIC6.99□□□□□ -1.29
VMP1Q96GC9 OR7E62P-201ENST00000456741 477 ntBASIC6.99□□□□□ -1.29
VMP1Q96GC9 AL357143.1-201ENST00000457239 934 ntTSL 5 BASIC6.99□□□□□ -1.29
VMP1Q96GC9 RN7SL182P-201ENST00000496499 300 ntBASIC6.99□□□□□ -1.29
VMP1Q96GC9 RPL41-202ENST00000501597 469 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
VMP1Q96GC9 NPY6R-201ENST00000503807 1112 ntBASIC6.99□□□□□ -1.29
VMP1Q96GC9 LINC00992-201ENST00000504107 617 ntTSL 2 BASIC6.99□□□□□ -1.29
VMP1Q96GC9 GOLGA5P1-201ENST00000507317 980 ntBASIC6.99□□□□□ -1.29
VMP1Q96GC9 AC097375.1-201ENST00000507949 488 ntTSL 3 BASIC6.99□□□□□ -1.29
VMP1Q96GC9 TNFRSF10A-AS1-201ENST00000518308 637 ntTSL 3 BASIC6.99□□□□□ -1.29
VMP1Q96GC9 AC009869.1-201ENST00000530418 528 ntTSL 4 BASIC6.99□□□□□ -1.29
VMP1Q96GC9 RERGL-203ENST00000538724 973 ntAPPRIS P1 TSL 2 BASIC6.99□□□□□ -1.29
VMP1Q96GC9 DDIT3-204ENST00000551116 1067 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
VMP1Q96GC9 AC060809.1-201ENST00000559211 564 ntTSL 4 BASIC6.99□□□□□ -1.29
VMP1Q96GC9 LINC02180-201ENST00000566439 1010 ntTSL 3 BASIC6.99□□□□□ -1.29
VMP1Q96GC9 IZUMO3-203ENST00000604921 743 ntAPPRIS P2 TSL 5 BASIC6.99□□□□□ -1.29
VMP1Q96GC9 RPL12P48-201ENST00000605620 304 ntBASIC6.99□□□□□ -1.29
VMP1Q96GC9 AL352984.2-201ENST00000611153 546 ntBASIC6.99□□□□□ -1.29
VMP1Q96GC9 CCL4L2-212ENST00000615418 954 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
VMP1Q96GC9 AC018558.4-201ENST00000622153 281 ntBASIC6.99□□□□□ -1.29
VMP1Q96GC9 OR8D2-201ENST00000624618 1051 ntAPPRIS P1 BASIC6.99□□□□□ -1.29
VMP1Q96GC9 RAPGEF5-201ENST00000344041 6621 ntAPPRIS P1 TSL 5 BASIC6.99□□□□□ -1.29
VMP1Q96GC9 PRICKLE1-202ENST00000445766 4075 ntAPPRIS P1 TSL 5 BASIC6.99□□□□□ -1.29
VMP1Q96GC9 LDHA-204ENST00000396222 1766 ntTSL 2 BASIC6.99□□□□□ -1.29
VMP1Q96GC9 AL353795.1-201ENST00000439134 1775 ntBASIC6.99□□□□□ -1.29
VMP1Q96GC9 TRIM6-TRIM34-201ENST00000354852 3391 ntAPPRIS P1 TSL 2 BASIC6.99□□□□□ -1.29
VMP1Q96GC9 SPATA6-202ENST00000371843 2297 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
VMP1Q96GC9 AP000547.3-204ENST00000588548 2523 ntBASIC6.99□□□□□ -1.29
VMP1Q96GC9 CDK12-202ENST00000447079 8336 ntAPPRIS P3 TSL 1 (best) BASIC6.99□□□□□ -1.29
VMP1Q96GC9 SPATA31B1P-201ENST00000434692 4016 ntBASIC6.99□□□□□ -1.29
VMP1Q96GC9 AL391380.1-201ENST00000439300 1432 ntBASIC6.99□□□□□ -1.29
VMP1Q96GC9 OFD1P8Y-201ENST00000449148 1433 ntBASIC6.99□□□□□ -1.29
VMP1Q96GC9 TFDP2-222ENST00000495310 1442 ntAPPRIS ALT2 TSL 2 BASIC6.99□□□□□ -1.29
VMP1Q96GC9 BNC1-202ENST00000569704 3169 ntAPPRIS ALT2 TSL 5 BASIC6.99□□□□□ -1.29
VMP1Q96GC9 GTF2H3-212ENST00000543341 3329 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
VMP1Q96GC9 AC242022.1-201ENST00000638002 1565 ntTSL 5 BASIC6.99□□□□□ -1.29
VMP1Q96GC9 DNM1L-202ENST00000358214 3229 ntTSL 5 BASIC6.99□□□□□ -1.29
VMP1Q96GC9 ENKUR-201ENST00000331161 3382 ntAPPRIS P2 TSL 1 (best) BASIC6.99□□□□□ -1.29
VMP1Q96GC9 TEX11-204ENST00000395889 3133 ntAPPRIS P3 TSL 2 BASIC6.98□□□□□ -1.29
VMP1Q96GC9 RPE65-201ENST00000262340 2610 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
VMP1Q96GC9 WASF5P-205ENST00000428639 1455 ntBASIC6.98□□□□□ -1.29
VMP1Q96GC9 POGZ-218ENST00000531094 4415 ntAPPRIS ALT1 TSL 2 BASIC6.98□□□□□ -1.29
VMP1Q96GC9 LINC01990-201ENST00000609293 1487 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
VMP1Q96GC9 NCOA6-202ENST00000374796 9311 ntAPPRIS P3 TSL 1 (best) BASIC6.98□□□□□ -1.29
VMP1Q96GC9 ZNF562-202ENST00000453372 2111 ntAPPRIS P3 TSL 3 BASIC6.98□□□□□ -1.29
Retrieved 100 of 98,524 protein–RNA pairs in 69.7 ms