Protein–RNA interactions for Protein: O75677

RFPL1, Ret finger protein-like 1, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFPL1O75677 RBM46-201ENST00000281722 2583 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.23
RFPL1O75677 HMGCR-209ENST00000511206 3395 ntAPPRIS P1 TSL 2 BASIC7.4□□□□□ -1.23
RFPL1O75677 HP1BP3-201ENST00000312239 3938 ntAPPRIS P1 TSL 2 BASIC7.4□□□□□ -1.23
RFPL1O75677 GUSBP1-205ENST00000607545 4157 ntTSL 2 BASIC7.4□□□□□ -1.23
RFPL1O75677 PTK2-228ENST00000521059 4405 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.23
RFPL1O75677 HYDIN-206ENST00000393567 15719 ntAPPRIS ALT2 TSL 5 BASIC7.39□□□□□ -1.23
RFPL1O75677 DPY19L3-202ENST00000392250 5998 ntAPPRIS P1 TSL 5 BASIC7.39□□□□□ -1.23
RFPL1O75677 AC009237.3-203ENST00000442128 3551 ntBASIC7.39□□□□□ -1.23
RFPL1O75677 CACNA1D-224ENST00000637424 6856 ntAPPRIS ALT2 TSL 5 BASIC7.39□□□□□ -1.23
RFPL1O75677 TRIM2-201ENST00000338700 6735 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
RFPL1O75677 MEPE-204ENST00000497649 2226 ntAPPRIS ALT2 TSL 5 BASIC7.39□□□□□ -1.23
RFPL1O75677 RPS20-205ENST00000519807 1826 ntTSL 2 BASIC7.39□□□□□ -1.23
RFPL1O75677 SLC38A1-211ENST00000612161 1607 ntTSL 5 BASIC7.39□□□□□ -1.23
RFPL1O75677 GABRA2-205ENST00000507069 1562 ntTSL 3 BASIC7.39□□□□□ -1.23
RFPL1O75677 OFD1P10Y-201ENST00000434110 1433 ntBASIC7.39□□□□□ -1.23
RFPL1O75677 MAPK10-379ENST00000642013 1385 ntBASIC7.39□□□□□ -1.23
RFPL1O75677 AC121758.1-201ENST00000557452 3942 ntTSL 2 BASIC7.39□□□□□ -1.23
RFPL1O75677 ERC1-204ENST00000397203 9118 ntTSL 5 BASIC7.39□□□□□ -1.23
RFPL1O75677 METTL5-202ENST00000308099 629 ntTSL 3 BASIC7.39□□□□□ -1.23
RFPL1O75677 IL22-201ENST00000328087 1150 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
RFPL1O75677 AL353625.1-202ENST00000366273 571 ntBASIC7.39□□□□□ -1.23
RFPL1O75677 TRAV8-3-201ENST00000390435 341 ntAPPRIS P1 BASIC7.39□□□□□ -1.23
RFPL1O75677 RAB5CP1-201ENST00000395972 580 ntBASIC7.39□□□□□ -1.23
RFPL1O75677 AL109918.1-202ENST00000406724 436 ntBASIC7.39□□□□□ -1.23
RFPL1O75677 MIR1204-201ENST00000408388 67 ntBASIC7.39□□□□□ -1.23
RFPL1O75677 RN7SKP225-201ENST00000410405 352 ntBASIC7.39□□□□□ -1.23
RFPL1O75677 RAB9AP4-201ENST00000415230 609 ntBASIC7.39□□□□□ -1.23
RFPL1O75677 AC007384.1-202ENST00000417026 891 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
RFPL1O75677 AC008753.1-201ENST00000423096 284 ntBASIC7.39□□□□□ -1.23
RFPL1O75677 OR5P4P-201ENST00000424698 917 ntBASIC7.39□□□□□ -1.23
RFPL1O75677 AL157402.1-201ENST00000429469 363 ntTSL 3 BASIC7.39□□□□□ -1.23
RFPL1O75677 AC138207.1-201ENST00000442757 545 ntTSL 3 BASIC7.39□□□□□ -1.23
RFPL1O75677 ARMC8P1-201ENST00000443069 1289 ntBASIC7.39□□□□□ -1.23
RFPL1O75677 SS18L2P1-201ENST00000445923 213 ntBASIC7.39□□□□□ -1.23
RFPL1O75677 KIF3AP1-201ENST00000454055 611 ntBASIC7.39□□□□□ -1.23
RFPL1O75677 AC092675.1-203ENST00000454230 538 ntTSL 5 BASIC7.39□□□□□ -1.23
RFPL1O75677 LINC01014-203ENST00000455307 548 ntTSL 2 BASIC7.39□□□□□ -1.23
RFPL1O75677 CYCSP53-201ENST00000455540 265 ntBASIC7.39□□□□□ -1.23
RFPL1O75677 AC094105.1-201ENST00000509745 560 ntTSL 4 BASIC7.39□□□□□ -1.23
RFPL1O75677 AC010245.1-201ENST00000511329 754 ntTSL 3 BASIC7.39□□□□□ -1.23
RFPL1O75677 SETP12-201ENST00000514068 805 ntBASIC7.39□□□□□ -1.23
RFPL1O75677 SNX18P27-201ENST00000523611 779 ntBASIC7.39□□□□□ -1.23
RFPL1O75677 CHCHD3P2-201ENST00000550751 639 ntBASIC7.39□□□□□ -1.23
RFPL1O75677 AC087392.1-201ENST00000576252 820 ntTSL 2 BASIC7.39□□□□□ -1.23
RFPL1O75677 AC093484.5-201ENST00000585048 304 ntTSL 3 BASIC7.39□□□□□ -1.23
RFPL1O75677 AC090241.1-201ENST00000587732 621 ntBASIC7.39□□□□□ -1.23
RFPL1O75677 FXYD6P1-201ENST00000604857 285 ntBASIC7.39□□□□□ -1.23
RFPL1O75677 AC004852.1-201ENST00000605206 154 ntBASIC7.39□□□□□ -1.23
RFPL1O75677 STATH-208ENST00000615994 598 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
RFPL1O75677 PART1_3.1-201ENST00000619680 131 ntBASIC7.39□□□□□ -1.23
RFPL1O75677 RN7SL680P-201ENST00000620379 299 ntBASIC7.39□□□□□ -1.23
RFPL1O75677 SPATA31C2-201ENST00000324915 3777 ntBASIC7.39□□□□□ -1.23
RFPL1O75677 AKR1C2-201ENST00000380753 3756 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
RFPL1O75677 LINC01772-201ENST00000457898 3245 ntTSL 2 BASIC7.39□□□□□ -1.23
RFPL1O75677 PARP9-202ENST00000462315 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC7.39□□□□□ -1.23
RFPL1O75677 GPNMB-201ENST00000258733 2862 ntAPPRIS P3 TSL 1 (best) BASIC7.39□□□□□ -1.23
RFPL1O75677 DPY19L1P1-201ENST00000417811 2594 ntBASIC7.39□□□□□ -1.23
RFPL1O75677 NBPF12-203ENST00000611443 5594 ntTSL 5 BASIC7.39□□□□□ -1.23
RFPL1O75677 TAF1-203ENST00000373790 7629 ntAPPRIS ALT2 TSL 1 (best) BASIC7.39□□□□□ -1.23
RFPL1O75677 ESRRG-221ENST00000493603 5304 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
RFPL1O75677 AC008560.1-201ENST00000510585 1766 ntAPPRIS P5 TSL 2 BASIC7.38□□□□□ -1.23
RFPL1O75677 HTR1D-201ENST00000374619 2835 ntAPPRIS P1 BASIC7.38□□□□□ -1.23
RFPL1O75677 SMAD1-202ENST00000394092 1658 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
RFPL1O75677 FBXW7-201ENST00000263981 3743 ntAPPRIS ALT1 TSL 1 (best) BASIC7.38□□□□□ -1.23
RFPL1O75677 NRCAM-204ENST00000379028 6685 ntAPPRIS ALT2 TSL 5 BASIC7.38□□□□□ -1.23
RFPL1O75677 AC120036.2-201ENST00000509729 1474 ntBASIC7.38□□□□□ -1.23
RFPL1O75677 CNOT6LP1-201ENST00000559681 1462 ntBASIC7.38□□□□□ -1.23
RFPL1O75677 DNM1L-203ENST00000381000 4397 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
RFPL1O75677 LINC01630-208ENST00000635680 4363 ntTSL 5 BASIC7.38□□□□□ -1.23
RFPL1O75677 MYLK-206ENST00000418370 7282 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
RFPL1O75677 LINC02324-201ENST00000531609 1442 ntTSL 2 BASIC7.38□□□□□ -1.23
RFPL1O75677 MUC4-209ENST00000463781 17110 ntAPPRIS ALT2 TSL 5 BASIC7.38□□□□□ -1.23
RFPL1O75677 COQ10B-202ENST00000409010 1355 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
RFPL1O75677 LINC02047-201ENST00000494761 1371 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
RFPL1O75677 HNRNPCL4-201ENST00000323770 882 ntAPPRIS P1 BASIC7.38□□□□□ -1.23
RFPL1O75677 SGMS1-201ENST00000361543 1096 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
RFPL1O75677 RNA5SP218-201ENST00000363188 109 ntBASIC7.38□□□□□ -1.23
RFPL1O75677 SNORA27.3-201ENST00000364937 134 ntBASIC7.38□□□□□ -1.23
RFPL1O75677 NCR2-201ENST00000373083 1154 ntAPPRIS ALT2 TSL 1 (best) BASIC7.38□□□□□ -1.23
RFPL1O75677 CASP10-206ENST00000374650 1126 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
RFPL1O75677 BCL2L15-202ENST00000393316 1084 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
RFPL1O75677 AC008171.1-201ENST00000395058 200 ntBASIC7.38□□□□□ -1.23
RFPL1O75677 CDKN3-203ENST00000395577 637 ntTSL 5 BASIC7.38□□□□□ -1.23
RFPL1O75677 S100B-203ENST00000397648 839 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
RFPL1O75677 CNPY1-202ENST00000406197 560 ntTSL 5 BASIC7.38□□□□□ -1.23
RFPL1O75677 AC003975.1-201ENST00000411856 837 ntTSL 3 BASIC7.38□□□□□ -1.23
RFPL1O75677 AC006547.2-201ENST00000412713 526 ntTSL 4 BASIC7.38□□□□□ -1.23
RFPL1O75677 LINC00159-202ENST00000414877 428 ntTSL 4 BASIC7.38□□□□□ -1.23
RFPL1O75677 AL731684.1-201ENST00000415530 439 ntTSL 5 BASIC7.38□□□□□ -1.23
RFPL1O75677 AC023141.10-201ENST00000415634 200 ntBASIC7.38□□□□□ -1.23
RFPL1O75677 AF064860.1-201ENST00000416555 544 ntTSL 3 BASIC7.38□□□□□ -1.23
RFPL1O75677 LINC01392-201ENST00000419883 565 ntTSL 5 BASIC7.38□□□□□ -1.23
RFPL1O75677 AC118470.1-201ENST00000419891 453 ntAPPRIS P1 TSL 3 BASIC7.38□□□□□ -1.23
RFPL1O75677 ZEB1-AS1-202ENST00000424191 320 ntTSL 3 BASIC7.38□□□□□ -1.23
RFPL1O75677 AC009303.1-201ENST00000426307 352 ntBASIC7.38□□□□□ -1.23
RFPL1O75677 AL390879.2-203ENST00000426943 1121 ntBASIC7.38□□□□□ -1.23
RFPL1O75677 ATP13A4-AS1-202ENST00000431512 394 ntTSL 3 BASIC7.38□□□□□ -1.23
RFPL1O75677 GAPDHP16-201ENST00000448152 962 ntBASIC7.38□□□□□ -1.23
RFPL1O75677 LINC00489-201ENST00000457816 543 ntTSL 5 BASIC7.38□□□□□ -1.23
RFPL1O75677 TOPORSLP1-202ENST00000469756 969 ntTSL 3 BASIC7.38□□□□□ -1.23
Retrieved 100 of 98,524 protein–RNA pairs in 101 ms