Protein–RNA interactions for Protein: Q9NPC3

CCNB1IP1, E3 ubiquitin-protein ligase CCNB1IP1, humanhuman

Predictions only

Length 277 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNB1IP1Q9NPC3 RPL34P22-201ENST00000468193 318 ntBASIC6.57□□□□□ -1.36
CCNB1IP1Q9NPC3 RPL7AP56-201ENST00000476420 791 ntBASIC6.57□□□□□ -1.36
CCNB1IP1Q9NPC3 AC074386.1-206ENST00000487102 761 ntBASIC6.57□□□□□ -1.36
CCNB1IP1Q9NPC3 GAPDHP38-201ENST00000503632 1002 ntBASIC6.57□□□□□ -1.36
CCNB1IP1Q9NPC3 AC111194.1-201ENST00000509711 422 ntTSL 3 BASIC6.57□□□□□ -1.36
CCNB1IP1Q9NPC3 AC092674.1-201ENST00000513871 571 ntTSL 4 BASIC6.57□□□□□ -1.36
CCNB1IP1Q9NPC3 LINC02223-203ENST00000514771 781 ntTSL 5 BASIC6.57□□□□□ -1.36
CCNB1IP1Q9NPC3 TNFRSF10A-AS1-201ENST00000518308 637 ntTSL 3 BASIC6.57□□□□□ -1.36
CCNB1IP1Q9NPC3 AC008677.3-201ENST00000519146 666 ntBASIC6.57□□□□□ -1.36
CCNB1IP1Q9NPC3 PPIAL4D-201ENST00000544708 495 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
CCNB1IP1Q9NPC3 AC073571.1-201ENST00000549103 475 ntTSL 3 BASIC6.57□□□□□ -1.36
CCNB1IP1Q9NPC3 AL118558.1-201ENST00000557551 566 ntTSL 3 BASIC6.57□□□□□ -1.36
CCNB1IP1Q9NPC3 AC027020.1-202ENST00000557839 429 ntTSL 5 BASIC6.57□□□□□ -1.36
CCNB1IP1Q9NPC3 AC092720.1-203ENST00000563921 550 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
CCNB1IP1Q9NPC3 LINC01989-201ENST00000566930 1081 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
CCNB1IP1Q9NPC3 AC027688.2-201ENST00000569009 511 ntTSL 3 BASIC6.57□□□□□ -1.36
CCNB1IP1Q9NPC3 AC130456.5-201ENST00000569345 510 ntTSL 5 BASIC6.57□□□□□ -1.36
CCNB1IP1Q9NPC3 AC015908.3-202ENST00000579367 457 ntTSL 2 BASIC6.57□□□□□ -1.36
CCNB1IP1Q9NPC3 AC118757.1-202ENST00000589074 609 ntTSL 2 BASIC6.57□□□□□ -1.36
CCNB1IP1Q9NPC3 MIR205HG-210ENST00000603283 455 ntTSL 3 BASIC6.57□□□□□ -1.36
CCNB1IP1Q9NPC3 AL589743.4-201ENST00000610763 586 ntTSL 5 BASIC6.57□□□□□ -1.36
CCNB1IP1Q9NPC3 CT45A8-202ENST00000611660 1008 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
CCNB1IP1Q9NPC3 CT45A10-201ENST00000611668 1010 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
CCNB1IP1Q9NPC3 CT45A2-202ENST00000612907 1008 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
CCNB1IP1Q9NPC3 Metazoa_SRP.189-201ENST00000614219 303 ntBASIC6.57□□□□□ -1.36
CCNB1IP1Q9NPC3 RN7SL680P-201ENST00000620379 299 ntBASIC6.57□□□□□ -1.36
CCNB1IP1Q9NPC3 CT45A9-202ENST00000620704 1010 ntAPPRIS P1 TSL 5 BASIC6.57□□□□□ -1.36
CCNB1IP1Q9NPC3 AP001043.1-201ENST00000626259 773 ntTSL 5 BASIC6.57□□□□□ -1.36
CCNB1IP1Q9NPC3 NDFIP2-206ENST00000620924 2324 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
CCNB1IP1Q9NPC3 VTCN1-207ENST00000539893 2719 ntTSL 2 BASIC6.57□□□□□ -1.36
CCNB1IP1Q9NPC3 WDR93-204ENST00000558000 1886 ntAPPRIS ALT2 TSL 1 (best) BASIC6.57□□□□□ -1.36
CCNB1IP1Q9NPC3 HEPH-206ENST00000441993 4310 ntAPPRIS ALT2 TSL 1 (best) BASIC6.57□□□□□ -1.36
CCNB1IP1Q9NPC3 NAT1-210ENST00000545197 1827 ntTSL 5 BASIC6.57□□□□□ -1.36
CCNB1IP1Q9NPC3 IL5RA-201ENST00000256452 2001 ntAPPRIS P4 TSL 1 (best) BASIC6.57□□□□□ -1.36
CCNB1IP1Q9NPC3 DTNA-205ENST00000399113 2232 ntAPPRIS ALT2 TSL 5 BASIC6.57□□□□□ -1.36
CCNB1IP1Q9NPC3 TTC39B-206ENST00000507285 2243 ntAPPRIS ALT2 TSL 5 BASIC6.57□□□□□ -1.36
CCNB1IP1Q9NPC3 LY86-AS1-202ENST00000435641 2819 ntTSL 2 BASIC6.57□□□□□ -1.36
CCNB1IP1Q9NPC3 OR7D4-202ENST00000641244 4968 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
CCNB1IP1Q9NPC3 HERC4-211ENST00000492996 3385 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
CCNB1IP1Q9NPC3 CCR3-202ENST00000395940 1581 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
CCNB1IP1Q9NPC3 OGFOD1P1-201ENST00000447552 1592 ntBASIC6.57□□□□□ -1.36
CCNB1IP1Q9NPC3 SLC17A2-203ENST00000377850 2524 ntAPPRIS ALT2 TSL 5 BASIC6.56□□□□□ -1.36
CCNB1IP1Q9NPC3 LINC00624-201ENST00000619867 3088 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
CCNB1IP1Q9NPC3 HHLA2-201ENST00000357759 2666 ntAPPRIS P3 TSL 1 (best) BASIC6.56□□□□□ -1.36
CCNB1IP1Q9NPC3 NALCN-201ENST00000251127 6818 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
CCNB1IP1Q9NPC3 PRND-201ENST00000305817 3980 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
CCNB1IP1Q9NPC3 TMC5-208ENST00000564959 2434 ntTSL 2 BASIC6.56□□□□□ -1.36
CCNB1IP1Q9NPC3 FSHR-202ENST00000406846 2784 ntAPPRIS P4 TSL 1 (best) BASIC6.56□□□□□ -1.36
CCNB1IP1Q9NPC3 TBC1D32-201ENST00000275159 4431 ntAPPRIS ALT2 TSL 5 BASIC6.56□□□□□ -1.36
CCNB1IP1Q9NPC3 OVAAL-201ENST00000442621 1489 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
CCNB1IP1Q9NPC3 ZNF559-212ENST00000592896 1488 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
CCNB1IP1Q9NPC3 AL078621.1-201ENST00000272567 768 ntBASIC6.56□□□□□ -1.36
CCNB1IP1Q9NPC3 OR1A1-201ENST00000304094 930 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
CCNB1IP1Q9NPC3 NR1I3-203ENST00000367981 1076 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
CCNB1IP1Q9NPC3 TRBV9-201ENST00000390363 390 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
CCNB1IP1Q9NPC3 HNRNPCP2-201ENST00000399515 881 ntBASIC6.56□□□□□ -1.36
CCNB1IP1Q9NPC3 LINC01392-201ENST00000419883 565 ntTSL 5 BASIC6.56□□□□□ -1.36
CCNB1IP1Q9NPC3 MED15P9-201ENST00000424716 533 ntBASIC6.56□□□□□ -1.36
CCNB1IP1Q9NPC3 GYG1P2-201ENST00000426437 1006 ntBASIC6.56□□□□□ -1.36
CCNB1IP1Q9NPC3 AC010978.1-202ENST00000427050 893 ntTSL 3 BASIC6.56□□□□□ -1.36
CCNB1IP1Q9NPC3 HMGN1P6-201ENST00000438508 291 ntBASIC6.56□□□□□ -1.36
CCNB1IP1Q9NPC3 DSCAM-IT1-201ENST00000440363 720 ntTSL 3 BASIC6.56□□□□□ -1.36
CCNB1IP1Q9NPC3 RN7SL549P-201ENST00000478997 282 ntBASIC6.56□□□□□ -1.36
CCNB1IP1Q9NPC3 ZNF726-203ENST00000525354 806 ntTSL 2 BASIC6.56□□□□□ -1.36
CCNB1IP1Q9NPC3 OR7E96P-201ENST00000530816 976 ntBASIC6.56□□□□□ -1.36
CCNB1IP1Q9NPC3 OR7E1P-201ENST00000533891 958 ntBASIC6.56□□□□□ -1.36
CCNB1IP1Q9NPC3 AC023827.2-201ENST00000566880 1061 ntBASIC6.56□□□□□ -1.36
CCNB1IP1Q9NPC3 MRPS21P9-201ENST00000571150 257 ntBASIC6.56□□□□□ -1.36
CCNB1IP1Q9NPC3 AC103810.5-201ENST00000581622 560 ntTSL 5 BASIC6.56□□□□□ -1.36
CCNB1IP1Q9NPC3 AC097376.1-201ENST00000602907 997 ntBASIC6.56□□□□□ -1.36
CCNB1IP1Q9NPC3 CUX2P1-201ENST00000606426 298 ntBASIC6.56□□□□□ -1.36
CCNB1IP1Q9NPC3 AL022238.3-201ENST00000609279 443 ntBASIC6.56□□□□□ -1.36
CCNB1IP1Q9NPC3 GLYATL1-219ENST00000612196 909 ntAPPRIS ALT2 TSL 1 (best) BASIC6.56□□□□□ -1.36
CCNB1IP1Q9NPC3 AL049536.1-202ENST00000623572 455 ntTSL 5 BASIC6.56□□□□□ -1.36
CCNB1IP1Q9NPC3 AC022743.1-201ENST00000624990 664 ntBASIC6.56□□□□□ -1.36
CCNB1IP1Q9NPC3 OR2AH1P-202ENST00000641232 2744 ntBASIC6.56□□□□□ -1.36
CCNB1IP1Q9NPC3 AQP4-AS1-202ENST00000578701 2177 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
CCNB1IP1Q9NPC3 TMTC3-201ENST00000266712 7203 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
CCNB1IP1Q9NPC3 FBXW10-203ENST00000395665 3431 ntAPPRIS P3 TSL 1 (best) BASIC6.56□□□□□ -1.36
CCNB1IP1Q9NPC3 TRIM60P14-201ENST00000513444 1419 ntBASIC6.56□□□□□ -1.36
CCNB1IP1Q9NPC3 AC087045.3-201ENST00000623046 2468 ntBASIC6.56□□□□□ -1.36
CCNB1IP1Q9NPC3 ZNF519-207ENST00000590202 2830 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
CCNB1IP1Q9NPC3 CLEC5A-206ENST00000546910 3511 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
CCNB1IP1Q9NPC3 MDGA2-201ENST00000357362 2965 ntTSL 5 BASIC6.56□□□□□ -1.36
CCNB1IP1Q9NPC3 CYP2C8-201ENST00000371270 1923 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
CCNB1IP1Q9NPC3 HTR2A-202ENST00000542664 5429 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
CCNB1IP1Q9NPC3 AC242022.1-201ENST00000638002 1565 ntTSL 5 BASIC6.56□□□□□ -1.36
CCNB1IP1Q9NPC3 CDON-201ENST00000263577 4186 ntAPPRIS P3 TSL 1 (best) BASIC6.56□□□□□ -1.36
CCNB1IP1Q9NPC3 AC079949.2-201ENST00000617117 2933 ntBASIC6.56□□□□□ -1.36
CCNB1IP1Q9NPC3 PNPLA4-204ENST00000537427 2559 ntTSL 2 BASIC6.56□□□□□ -1.36
CCNB1IP1Q9NPC3 LCP1-201ENST00000323076 3787 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
CCNB1IP1Q9NPC3 MIPOL1-201ENST00000327441 7185 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
CCNB1IP1Q9NPC3 LRRC37A12P-201ENST00000454917 1801 ntBASIC6.55□□□□□ -1.36
CCNB1IP1Q9NPC3 MBNL3-206ENST00000394311 11263 ntTSL 2 BASIC6.55□□□□□ -1.36
CCNB1IP1Q9NPC3 AC106872.6-201ENST00000514228 1346 ntBASIC6.55□□□□□ -1.36
CCNB1IP1Q9NPC3 AC119674.1-204ENST00000641348 1343 ntBASIC6.55□□□□□ -1.36
CCNB1IP1Q9NPC3 AC004014.2-201ENST00000623718 5122 ntBASIC6.55□□□□□ -1.36
CCNB1IP1Q9NPC3 CNOT4-205ENST00000423368 3297 ntAPPRIS ALT1 TSL 1 (best) BASIC6.55□□□□□ -1.36
CCNB1IP1Q9NPC3 ZNF14-201ENST00000344099 2949 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
CCNB1IP1Q9NPC3 HMGCS2-204ENST00000544913 1925 ntTSL 2 BASIC6.55□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 77.1 ms