Protein–RNA interactions for Protein: Q8N3P4

VPS8, Vacuolar protein sorting-associated protein 8 homolog, humanhuman

Predictions only

Length 1,428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8Q8N3P4 AC245519.1-201ENST00000522799 512 ntTSL 4 BASIC10.77□□□□□ -0.68
VPS8Q8N3P4 MIR378C-201ENST00000578683 81 ntBASIC10.77□□□□□ -0.68
VPS8Q8N3P4 AC005858.3-201ENST00000624756 589 ntBASIC10.77□□□□□ -0.68
VPS8Q8N3P4 AC183089.2-201ENST00000637931 916 ntBASIC10.77□□□□□ -0.68
VPS8Q8N3P4 KAT14-202ENST00000435364 3618 ntAPPRIS P2 TSL 1 (best) BASIC10.77□□□□□ -0.68
VPS8Q8N3P4 ZNF806-201ENST00000438300 1774 ntBASIC10.77□□□□□ -0.69
VPS8Q8N3P4 H3F3A-201ENST00000366813 1308 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
VPS8Q8N3P4 ADGRA3-209ENST00000508133 1572 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
VPS8Q8N3P4 LIMS1-203ENST00000393310 4392 ntAPPRIS P3 TSL 1 (best) BASIC10.77□□□□□ -0.69
VPS8Q8N3P4 CDH17-203ENST00000450165 2625 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
VPS8Q8N3P4 IREB2-208ENST00000560440 4396 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
VPS8Q8N3P4 ENAH-204ENST00000366844 13168 ntAPPRIS P4 TSL 1 (best) BASIC10.77□□□□□ -0.69
VPS8Q8N3P4 F13A1-201ENST00000264870 3999 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
VPS8Q8N3P4 AL451064.2-201ENST00000623514 1654 ntBASIC10.77□□□□□ -0.69
VPS8Q8N3P4 TRIM75P-201ENST00000503032 1407 ntAPPRIS P1 BASIC10.77□□□□□ -0.69
VPS8Q8N3P4 ZMAT1-206ENST00000540921 3139 ntAPPRIS P1 TSL 2 BASIC10.77□□□□□ -0.69
VPS8Q8N3P4 MORC3-201ENST00000400485 4246 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
VPS8Q8N3P4 HLTF-201ENST00000310053 5317 ntAPPRIS P3 TSL 1 (best) BASIC10.77□□□□□ -0.69
VPS8Q8N3P4 AMY1A-201ENST00000370083 1790 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
VPS8Q8N3P4 FAM208A-210ENST00000614531 3441 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
VPS8Q8N3P4 TDP1-201ENST00000335725 3702 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
VPS8Q8N3P4 CDKL5-201ENST00000379989 3463 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
VPS8Q8N3P4 GART-204ENST00000381831 3490 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
VPS8Q8N3P4 TAS2R42-201ENST00000334266 945 ntAPPRIS P1 BASIC10.76□□□□□ -0.69
VPS8Q8N3P4 RGS5-202ENST00000367903 934 ntTSL 3 BASIC10.76□□□□□ -0.69
VPS8Q8N3P4 AC019178.1-201ENST00000392337 440 ntBASIC10.76□□□□□ -0.69
VPS8Q8N3P4 MIR1266-201ENST00000408125 84 ntBASIC10.76□□□□□ -0.69
VPS8Q8N3P4 MORF4L1P5-201ENST00000433352 961 ntBASIC10.76□□□□□ -0.69
VPS8Q8N3P4 AC068647.2-202ENST00000485020 390 ntTSL 3 BASIC10.76□□□□□ -0.69
VPS8Q8N3P4 AC139713.1-202ENST00000512366 460 ntBASIC10.76□□□□□ -0.69
VPS8Q8N3P4 AC100768.2-201ENST00000534068 683 ntTSL 3 BASIC10.76□□□□□ -0.69
VPS8Q8N3P4 AC009269.5-201ENST00000557800 755 ntTSL 3 BASIC10.76□□□□□ -0.69
VPS8Q8N3P4 AL390718.1-201ENST00000566904 506 ntTSL 3 BASIC10.76□□□□□ -0.69
VPS8Q8N3P4 RPL29P33-201ENST00000587474 316 ntBASIC10.76□□□□□ -0.69
VPS8Q8N3P4 ARF4-AS1-203ENST00000607782 552 ntTSL 3 BASIC10.76□□□□□ -0.69
VPS8Q8N3P4 HOXA11-AS1_3.1-201ENST00000613383 98 ntBASIC10.76□□□□□ -0.69
VPS8Q8N3P4 BMS1P14-201ENST00000615056 606 ntTSL 5 BASIC10.76□□□□□ -0.69
VPS8Q8N3P4 AC131009.3-201ENST00000621809 287 ntBASIC10.76□□□□□ -0.69
VPS8Q8N3P4 AC006328.2-201ENST00000623198 397 ntBASIC10.76□□□□□ -0.69
VPS8Q8N3P4 AC120057.5-201ENST00000623840 154 ntBASIC10.76□□□□□ -0.69
VPS8Q8N3P4 AC012005.2-201ENST00000624333 397 ntBASIC10.76□□□□□ -0.69
VPS8Q8N3P4 RPS27L-208ENST00000635699 693 ntTSL 5 BASIC10.76□□□□□ -0.69
VPS8Q8N3P4 MBD5-221ENST00000637159 902 ntTSL 5 BASIC10.76□□□□□ -0.69
VPS8Q8N3P4 AL160408.3-201ENST00000442382 3564 ntTSL 2 BASIC10.76□□□□□ -0.69
VPS8Q8N3P4 AGL-201ENST00000294724 7446 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
VPS8Q8N3P4 ORC3-206ENST00000546266 2470 ntTSL 2 BASIC10.76□□□□□ -0.69
VPS8Q8N3P4 LYPD6B-202ENST00000409029 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
VPS8Q8N3P4 ZHX3-218ENST00000560364 4283 ntTSL 5 BASIC10.76□□□□□ -0.69
VPS8Q8N3P4 AC007878.1-201ENST00000434786 1615 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
VPS8Q8N3P4 PKIA-AS1-202ENST00000522302 2011 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
VPS8Q8N3P4 ACSL4-204ENST00000469796 5225 ntAPPRIS P4 TSL 5 BASIC10.76□□□□□ -0.69
VPS8Q8N3P4 RTN4-205ENST00000394609 1898 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
VPS8Q8N3P4 RACGAP1P-201ENST00000550663 1879 ntBASIC10.76□□□□□ -0.69
VPS8Q8N3P4 CDC40-203ENST00000368932 3933 ntAPPRIS P1 TSL 5 BASIC10.76□□□□□ -0.69
VPS8Q8N3P4 KAT7-203ENST00000435742 3638 ntTSL 2 BASIC10.76□□□□□ -0.69
VPS8Q8N3P4 PPFIA2-220ENST00000550584 5405 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
VPS8Q8N3P4 UBE2D3-204ENST00000349311 838 ntAPPRIS ALT1 TSL 2 BASIC10.75□□□□□ -0.69
VPS8Q8N3P4 NQO1-202ENST00000379046 1105 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
VPS8Q8N3P4 C2orf76-203ENST00000409523 747 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
VPS8Q8N3P4 ZNF880-203ENST00000424032 558 ntTSL 4 BASIC10.75□□□□□ -0.69
VPS8Q8N3P4 PA2G4P1-201ENST00000442248 1197 ntBASIC10.75□□□□□ -0.69
VPS8Q8N3P4 CRYGGP-201ENST00000443337 145 ntBASIC10.75□□□□□ -0.69
VPS8Q8N3P4 PFN1P11-201ENST00000445829 389 ntBASIC10.75□□□□□ -0.69
VPS8Q8N3P4 AC026391.1-201ENST00000450677 537 ntTSL 3 BASIC10.75□□□□□ -0.69
VPS8Q8N3P4 RN7SL83P-201ENST00000468131 297 ntBASIC10.75□□□□□ -0.69
VPS8Q8N3P4 RN7SL836P-201ENST00000476140 296 ntBASIC10.75□□□□□ -0.69
VPS8Q8N3P4 AC104825.1-201ENST00000503186 685 ntTSL 3 BASIC10.75□□□□□ -0.69
VPS8Q8N3P4 RNA5SP318-201ENST00000516352 92 ntBASIC10.75□□□□□ -0.69
VPS8Q8N3P4 AC010834.1-201ENST00000517998 696 ntTSL 2 BASIC10.75□□□□□ -0.69
VPS8Q8N3P4 IGLVVII-41-1-201ENST00000518405 151 ntBASIC10.75□□□□□ -0.69
VPS8Q8N3P4 AC104248.1-201ENST00000522244 481 ntTSL 3 BASIC10.75□□□□□ -0.69
VPS8Q8N3P4 ASB8-207ENST00000536953 923 ntTSL 2 BASIC10.75□□□□□ -0.69
VPS8Q8N3P4 AC005519.1-201ENST00000554490 601 ntBASIC10.75□□□□□ -0.69
VPS8Q8N3P4 NUDT7-206ENST00000568787 678 ntTSL 2 BASIC10.75□□□□□ -0.69
VPS8Q8N3P4 MIR6885-201ENST00000612241 66 ntBASIC10.75□□□□□ -0.69
VPS8Q8N3P4 DOCK8-205ENST00000453981 7237 ntTSL 5 BASIC10.75□□□□□ -0.69
VPS8Q8N3P4 TBC1D23-205ENST00000475134 2074 ntTSL 5 BASIC10.75□□□□□ -0.69
VPS8Q8N3P4 SLAMF1-202ENST00000302035 4006 ntAPPRIS P3 TSL 1 (best) BASIC10.75□□□□□ -0.69
VPS8Q8N3P4 CLNK-204ENST00000515667 4180 ntAPPRIS ALT2 TSL 3 BASIC10.75□□□□□ -0.69
VPS8Q8N3P4 MFSD8-217ENST00000641178 4374 ntBASIC10.75□□□□□ -0.69
VPS8Q8N3P4 ACACB-203ENST00000377854 6588 ntTSL 5 BASIC10.75□□□□□ -0.69
VPS8Q8N3P4 HMG20A-202ENST00000381714 4112 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
VPS8Q8N3P4 DMTF1-213ENST00000432937 2411 ntTSL 2 BASIC10.75□□□□□ -0.69
VPS8Q8N3P4 GTDC1-212ENST00000463875 1563 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
VPS8Q8N3P4 ZEB2-232ENST00000636026 5172 ntTSL 5 BASIC10.75□□□□□ -0.69
VPS8Q8N3P4 SEC62-201ENST00000337002 6568 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
VPS8Q8N3P4 SH2D1B-201ENST00000367929 2523 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
VPS8Q8N3P4 CHRM5-202ENST00000557872 2687 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
VPS8Q8N3P4 LINC00922-203ENST00000569736 1760 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
VPS8Q8N3P4 SNORD94-201ENST00000386037 137 ntBASIC10.75□□□□□ -0.69
VPS8Q8N3P4 AC026310.1-201ENST00000396004 378 ntBASIC10.75□□□□□ -0.69
VPS8Q8N3P4 RN7SKP205-201ENST00000410999 307 ntBASIC10.75□□□□□ -0.69
VPS8Q8N3P4 AC245047.1-201ENST00000433276 873 ntBASIC10.75□□□□□ -0.69
VPS8Q8N3P4 AL133319.1-201ENST00000447848 777 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
VPS8Q8N3P4 RN7SL834P-201ENST00000461450 286 ntBASIC10.75□□□□□ -0.69
VPS8Q8N3P4 AC078788.1-201ENST00000498457 634 ntTSL 3 BASIC10.75□□□□□ -0.69
VPS8Q8N3P4 LINC02059-201ENST00000503843 452 ntTSL 3 BASIC10.75□□□□□ -0.69
VPS8Q8N3P4 LINC02237-201ENST00000521753 805 ntTSL 3 BASIC10.75□□□□□ -0.69
VPS8Q8N3P4 AC103718.1-201ENST00000522667 683 ntTSL 3 BASIC10.75□□□□□ -0.69
VPS8Q8N3P4 SNRPCP6-201ENST00000528310 210 ntBASIC10.75□□□□□ -0.69
Retrieved 100 of 98,524 protein–RNA pairs in 92.2 ms