Protein–RNA interactions for Protein: Q8IXQ3

C9orf40, Uncharacterized protein C9orf40, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40Q8IXQ3 LSM3P3-201ENST00000436601 306 ntBASIC6.51□□□□□ -1.37
C9orf40Q8IXQ3 ETDA-202ENST00000454551 388 ntAPPRIS P1 TSL 3 BASIC6.51□□□□□ -1.37
C9orf40Q8IXQ3 RPL34P34-201ENST00000465389 354 ntBASIC6.51□□□□□ -1.37
C9orf40Q8IXQ3 FOXP1-AS1-201ENST00000465742 700 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
C9orf40Q8IXQ3 DCAF13P2-201ENST00000514188 555 ntBASIC6.51□□□□□ -1.37
C9orf40Q8IXQ3 AC022639.1-204ENST00000520365 569 ntTSL 4 BASIC6.51□□□□□ -1.37
C9orf40Q8IXQ3 AC099805.1-205ENST00000521794 837 ntTSL 2 BASIC6.51□□□□□ -1.37
C9orf40Q8IXQ3 HPS5-207ENST00000537258 1275 ntTSL 5 BASIC6.51□□□□□ -1.37
C9orf40Q8IXQ3 AC027288.1-201ENST00000548359 816 ntTSL 3 BASIC6.51□□□□□ -1.37
C9orf40Q8IXQ3 NQO1-205ENST00000561500 891 ntTSL 3 BASIC6.51□□□□□ -1.37
C9orf40Q8IXQ3 ACTG1P15-201ENST00000570019 1063 ntBASIC6.51□□□□□ -1.37
C9orf40Q8IXQ3 AC010761.3-201ENST00000578819 499 ntTSL 3 BASIC6.51□□□□□ -1.37
C9orf40Q8IXQ3 FCGR1CP-201ENST00000579737 1127 ntBASIC6.51□□□□□ -1.37
C9orf40Q8IXQ3 MIR7515HG-250ENST00000592565 856 ntTSL 5 BASIC6.51□□□□□ -1.37
C9orf40Q8IXQ3 ACTG1P22-201ENST00000603793 1099 ntBASIC6.51□□□□□ -1.37
C9orf40Q8IXQ3 AL078624.2-201ENST00000605063 554 ntBASIC6.51□□□□□ -1.37
C9orf40Q8IXQ3 AC241377.2-201ENST00000612313 553 ntTSL 4 BASIC6.51□□□□□ -1.37
C9orf40Q8IXQ3 AC116631.1-202ENST00000640984 683 ntBASIC6.51□□□□□ -1.37
C9orf40Q8IXQ3 AL596275.2-203ENST00000641951 371 ntBASIC6.51□□□□□ -1.37
C9orf40Q8IXQ3 AP002800.1-201ENST00000624982 2225 ntBASIC6.51□□□□□ -1.37
C9orf40Q8IXQ3 C1D-202ENST00000407324 1379 ntTSL 3 BASIC6.51□□□□□ -1.37
C9orf40Q8IXQ3 MPP7-201ENST00000337532 5080 ntAPPRIS P1 TSL 5 BASIC6.51□□□□□ -1.37
C9orf40Q8IXQ3 FHL1-227ENST00000628568 2304 ntTSL 5 BASIC6.51□□□□□ -1.37
C9orf40Q8IXQ3 PDLIM5-219ENST00000514743 3356 ntTSL 2 BASIC6.51□□□□□ -1.37
C9orf40Q8IXQ3 TMC3-AS1-206ENST00000612811 2726 ntBASIC6.51□□□□□ -1.37
C9orf40Q8IXQ3 FZD3-204ENST00000537916 13740 ntAPPRIS P1 TSL 2 BASIC6.51□□□□□ -1.37
C9orf40Q8IXQ3 AP001636.3-201ENST00000533954 2810 ntTSL 2 BASIC6.51□□□□□ -1.37
C9orf40Q8IXQ3 RSC1A1-201ENST00000345034 1854 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
C9orf40Q8IXQ3 LRRC37A4P-201ENST00000579913 3243 ntTSL 2 BASIC6.51□□□□□ -1.37
C9orf40Q8IXQ3 CFI-201ENST00000394634 2159 ntAPPRIS P3 TSL 1 (best) BASIC6.51□□□□□ -1.37
C9orf40Q8IXQ3 KIF14-202ENST00000614960 6838 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
C9orf40Q8IXQ3 WDPCP-204ENST00000409199 2466 ntTSL 2 BASIC6.51□□□□□ -1.37
C9orf40Q8IXQ3 ZNF521-214ENST00000584787 4327 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
C9orf40Q8IXQ3 RNF217-AS1-201ENST00000439075 4507 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
C9orf40Q8IXQ3 GOLGB1-201ENST00000340645 11187 ntAPPRIS P3 TSL 1 (best) BASIC6.51□□□□□ -1.37
C9orf40Q8IXQ3 SLA-201ENST00000338087 3451 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
C9orf40Q8IXQ3 FGD6-205ENST00000549499 3757 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
C9orf40Q8IXQ3 CDH12-201ENST00000382254 4164 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
C9orf40Q8IXQ3 GUSBP1-205ENST00000607545 4157 ntTSL 2 BASIC6.5□□□□□ -1.37
C9orf40Q8IXQ3 ALG13-224ENST00000610588 4175 ntTSL 2 BASIC6.5□□□□□ -1.37
C9orf40Q8IXQ3 FADS2P1-201ENST00000611807 1446 ntBASIC6.5□□□□□ -1.37
C9orf40Q8IXQ3 AL450327.1-201ENST00000430931 2632 ntTSL 5 BASIC6.5□□□□□ -1.37
C9orf40Q8IXQ3 EIF4E2-207ENST00000409514 3525 ntTSL 5 BASIC6.5□□□□□ -1.37
C9orf40Q8IXQ3 FGF9-201ENST00000382353 4220 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
C9orf40Q8IXQ3 ZNF407-202ENST00000309902 5595 ntTSL 2 BASIC6.5□□□□□ -1.37
C9orf40Q8IXQ3 AC026316.3-201ENST00000497988 3097 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
C9orf40Q8IXQ3 HSD17B13-201ENST00000302219 2269 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
C9orf40Q8IXQ3 AL022068.1-201ENST00000636202 1875 ntTSL 5 BASIC6.5□□□□□ -1.37
C9orf40Q8IXQ3 OR2A3P-202ENST00000641249 1776 ntBASIC6.5□□□□□ -1.37
C9orf40Q8IXQ3 SLC2A3P4-201ENST00000521259 1471 ntBASIC6.5□□□□□ -1.37
C9orf40Q8IXQ3 AC092725.2-201ENST00000567658 1389 ntBASIC6.5□□□□□ -1.37
C9orf40Q8IXQ3 TAS2R7-201ENST00000240687 1096 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
C9orf40Q8IXQ3 MYL1-201ENST00000341685 870 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
C9orf40Q8IXQ3 RNA5SP429-201ENST00000363688 109 ntBASIC6.5□□□□□ -1.37
C9orf40Q8IXQ3 RN7SKP62-201ENST00000384539 329 ntBASIC6.5□□□□□ -1.37
C9orf40Q8IXQ3 CFAP70-204ENST00000394865 1222 ntTSL 5 BASIC6.5□□□□□ -1.37
C9orf40Q8IXQ3 AL451061.1-201ENST00000407887 862 ntBASIC6.5□□□□□ -1.37
C9orf40Q8IXQ3 RN7SKP148-201ENST00000410179 275 ntBASIC6.5□□□□□ -1.37
C9orf40Q8IXQ3 RN7SKP268-201ENST00000411107 316 ntBASIC6.5□□□□□ -1.37
C9orf40Q8IXQ3 SPRY4-AS1-201ENST00000414314 521 ntTSL 3 BASIC6.5□□□□□ -1.37
C9orf40Q8IXQ3 AC007879.3-201ENST00000417096 556 ntTSL 4 BASIC6.5□□□□□ -1.37
C9orf40Q8IXQ3 SNRPEP5-201ENST00000425442 278 ntBASIC6.5□□□□□ -1.37
C9orf40Q8IXQ3 RPS19P6-201ENST00000441327 433 ntBASIC6.5□□□□□ -1.37
C9orf40Q8IXQ3 RBMY2EP-202ENST00000456360 940 ntBASIC6.5□□□□□ -1.37
C9orf40Q8IXQ3 PSMA6P2-201ENST00000457574 686 ntBASIC6.5□□□□□ -1.37
C9orf40Q8IXQ3 AC112225.1-201ENST00000508230 297 ntBASIC6.5□□□□□ -1.37
C9orf40Q8IXQ3 AC011405.1-203ENST00000510110 1067 ntTSL 3 BASIC6.5□□□□□ -1.37
C9orf40Q8IXQ3 RN7SKP11-201ENST00000517018 287 ntBASIC6.5□□□□□ -1.37
C9orf40Q8IXQ3 AC114550.1-201ENST00000518846 573 ntTSL 4 BASIC6.5□□□□□ -1.37
C9orf40Q8IXQ3 CASP1P2-201ENST00000526830 1258 ntBASIC6.5□□□□□ -1.37
C9orf40Q8IXQ3 AC079362.1-202ENST00000547089 278 ntTSL 3 BASIC6.5□□□□□ -1.37
C9orf40Q8IXQ3 AC073896.2-202ENST00000549860 437 ntTSL 2 BASIC6.5□□□□□ -1.37
C9orf40Q8IXQ3 AL135978.1-201ENST00000553618 1266 ntBASIC6.5□□□□□ -1.37
C9orf40Q8IXQ3 NR2F2-AS1-209ENST00000560800 549 ntTSL 4 BASIC6.5□□□□□ -1.37
C9orf40Q8IXQ3 AC023827.2-201ENST00000566880 1061 ntBASIC6.5□□□□□ -1.37
C9orf40Q8IXQ3 MIR4428-201ENST00000584884 73 ntBASIC6.5□□□□□ -1.37
C9orf40Q8IXQ3 ZNF415-218ENST00000599261 601 ntTSL 3 BASIC6.5□□□□□ -1.37
C9orf40Q8IXQ3 Metazoa_SRP.96-201ENST00000621315 318 ntBASIC6.5□□□□□ -1.37
C9orf40Q8IXQ3 AC073263.3-201ENST00000624449 858 ntBASIC6.5□□□□□ -1.37
C9orf40Q8IXQ3 PCBP1-AS1-359ENST00000630283 1063 ntTSL 5 BASIC6.5□□□□□ -1.37
C9orf40Q8IXQ3 SNTN-203ENST00000496807 3746 ntTSL 4 BASIC6.5□□□□□ -1.37
C9orf40Q8IXQ3 TNRC6A-201ENST00000315183 8303 ntAPPRIS ALT2 TSL 5 BASIC6.5□□□□□ -1.37
C9orf40Q8IXQ3 CDC7-203ENST00000428239 3313 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
C9orf40Q8IXQ3 BEST3-212ENST00000553096 2929 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
C9orf40Q8IXQ3 ATP2B4-204ENST00000367218 8918 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
C9orf40Q8IXQ3 LINC02179-201ENST00000561523 3673 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
C9orf40Q8IXQ3 CAPS2-205ENST00000409445 2135 ntTSL 2 BASIC6.5□□□□□ -1.37
C9orf40Q8IXQ3 ZNF3-203ENST00000303915 3473 ntAPPRIS P1 TSL 5 BASIC6.5□□□□□ -1.37
C9orf40Q8IXQ3 HRG-201ENST00000232003 2015 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
C9orf40Q8IXQ3 PDE4B-207ENST00000480109 2037 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
C9orf40Q8IXQ3 GRIA4-212ENST00000530497 5059 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
C9orf40Q8IXQ3 AC079178.2-201ENST00000439323 1624 ntBASIC6.5□□□□□ -1.37
C9orf40Q8IXQ3 KIF27-201ENST00000297814 4653 ntAPPRIS P3 TSL 1 (best) BASIC6.5□□□□□ -1.37
C9orf40Q8IXQ3 IL1RAP-202ENST00000317757 5413 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
C9orf40Q8IXQ3 INTS2-201ENST00000251334 4255 ntAPPRIS P1 TSL 2 BASIC6.5□□□□□ -1.37
C9orf40Q8IXQ3 DUXAP8-203ENST00000437781 2398 ntTSL 2 BASIC6.5□□□□□ -1.37
C9orf40Q8IXQ3 CNTNAP2-203ENST00000463592 6076 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
C9orf40Q8IXQ3 NSUN4-208ENST00000498008 3867 ntTSL 2 BASIC6.5□□□□□ -1.37
C9orf40Q8IXQ3 MEF2C-210ENST00000506554 3469 ntTSL 5 BASIC6.49□□□□□ -1.37
C9orf40Q8IXQ3 ZNF385B-201ENST00000336917 2610 ntTSL 5 BASIC6.49□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 74.9 ms