Protein–RNA interactions for Protein: P19447

ERCC3, TFIIH basal transcription factor complex helicase XPB subunit, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3P19447 AL589765.5-201ENST00000596133 515 ntBASIC8.87□□□□□ -0.99
ERCC3P19447 ZEB2-AS1-206ENST00000602006 572 ntTSL 5 BASIC8.87□□□□□ -0.99
ERCC3P19447 AC073333.2-201ENST00000603589 769 ntBASIC8.87□□□□□ -0.99
ERCC3P19447 AC112220.2-201ENST00000605513 533 ntBASIC8.87□□□□□ -0.99
ERCC3P19447 AC006946.3-201ENST00000609791 756 ntBASIC8.87□□□□□ -0.99
ERCC3P19447 MIR6774-201ENST00000614651 70 ntBASIC8.87□□□□□ -0.99
ERCC3P19447 Metazoa_SRP.167-201ENST00000614947 260 ntBASIC8.87□□□□□ -0.99
ERCC3P19447 BNIP3P41-202ENST00000616656 861 ntBASIC8.87□□□□□ -0.99
ERCC3P19447 AC048344.4-201ENST00000619744 527 ntBASIC8.87□□□□□ -0.99
ERCC3P19447 AC026464.2-201ENST00000567834 2421 ntBASIC8.87□□□□□ -0.99
ERCC3P19447 GTF2H1-210ENST00000530496 1700 ntTSL 2 BASIC8.87□□□□□ -0.99
ERCC3P19447 ACTR6-209ENST00000551617 1715 ntTSL 5 BASIC8.87□□□□□ -0.99
ERCC3P19447 NUP210L-202ENST00000368553 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC8.87□□□□□ -0.99
ERCC3P19447 HSP90AB2P-201ENST00000507090 2176 ntBASIC8.87□□□□□ -0.99
ERCC3P19447 TMEM161BP1-201ENST00000457388 1457 ntBASIC8.87□□□□□ -0.99
ERCC3P19447 AC120036.2-201ENST00000509729 1474 ntBASIC8.87□□□□□ -0.99
ERCC3P19447 ABCB4-203ENST00000359206 3923 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
ERCC3P19447 ESRP1-204ENST00000454170 3482 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
ERCC3P19447 IL31RA-206ENST00000447346 2577 ntAPPRIS P3 TSL 1 (best) BASIC8.87□□□□□ -0.99
ERCC3P19447 LINC02511-201ENST00000505736 1668 ntTSL 5 BASIC8.87□□□□□ -0.99
ERCC3P19447 BCLAF1-223ENST00000628517 2512 ntTSL 5 BASIC8.87□□□□□ -0.99
ERCC3P19447 RIPOR2-206ENST00000538035 5389 ntTSL 2 BASIC8.87□□□□□ -0.99
ERCC3P19447 PPP6R3-206ENST00000524904 4292 ntAPPRIS ALT1 TSL 1 (best) BASIC8.87□□□□□ -0.99
ERCC3P19447 TRIM66-202ENST00000402157 10086 ntAPPRIS P5 TSL 5 BASIC8.86□□□□□ -0.99
ERCC3P19447 CCDC66-203ENST00000394672 3096 ntAPPRIS ALT2 TSL 1 (best) BASIC8.86□□□□□ -0.99
ERCC3P19447 TBC1D19-205ENST00000511789 1386 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
ERCC3P19447 PALM2-AKAP2-201ENST00000302798 4718 ntTSL 2 BASIC8.86□□□□□ -0.99
ERCC3P19447 AC087203.2-201ENST00000526502 1587 ntBASIC8.86□□□□□ -0.99
ERCC3P19447 GPC3-204ENST00000631057 1581 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
ERCC3P19447 RAB3IP-215ENST00000551641 2840 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
ERCC3P19447 STOM-201ENST00000286713 3010 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
ERCC3P19447 MXI1-203ENST00000361248 2188 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
ERCC3P19447 LTBP1-202ENST00000404525 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC8.86□□□□□ -0.99
ERCC3P19447 ITPR1-202ENST00000354582 10242 ntTSL 5 BASIC8.86□□□□□ -0.99
ERCC3P19447 ZNF658-206ENST00000621410 4025 ntAPPRIS P1 TSL 2 BASIC8.86□□□□□ -0.99
ERCC3P19447 LGALS8-222ENST00000527974 1349 ntAPPRIS P4 TSL 5 BASIC8.86□□□□□ -0.99
ERCC3P19447 AL133464.1-201ENST00000635130 1705 ntTSL 5 BASIC8.86□□□□□ -0.99
ERCC3P19447 ANO6-201ENST00000320560 5975 ntAPPRIS P3 TSL 1 (best) BASIC8.86□□□□□ -0.99
ERCC3P19447 AL049697.1-201ENST00000507897 2301 ntAPPRIS P1 TSL 2 BASIC8.86□□□□□ -0.99
ERCC3P19447 AL023806.3-201ENST00000638502 2704 ntBASIC8.86□□□□□ -0.99
ERCC3P19447 NACA-216ENST00000550952 2922 ntTSL 2 BASIC8.86□□□□□ -0.99
ERCC3P19447 VMA21-201ENST00000330374 4717 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
ERCC3P19447 AL136146.1-201ENST00000529830 1667 ntBASIC8.86□□□□□ -0.99
ERCC3P19447 OR10J3-201ENST00000332217 990 ntAPPRIS P1 BASIC8.86□□□□□ -0.99
ERCC3P19447 SNORA70I-201ENST00000384544 135 ntBASIC8.86□□□□□ -0.99
ERCC3P19447 AL024507.1-201ENST00000412741 274 ntBASIC8.86□□□□□ -0.99
ERCC3P19447 PGAM1P3-201ENST00000420790 565 ntBASIC8.86□□□□□ -0.99
ERCC3P19447 ARL2BPP3-201ENST00000421226 480 ntBASIC8.86□□□□□ -0.99
ERCC3P19447 AL049637.1-201ENST00000424664 503 ntTSL 5 BASIC8.86□□□□□ -0.99
ERCC3P19447 LINC00348-201ENST00000428761 948 ntTSL 3 BASIC8.86□□□□□ -0.99
ERCC3P19447 AL592182.2-201ENST00000442477 858 ntTSL 2 BASIC8.86□□□□□ -0.99
ERCC3P19447 MRPS21P1-201ENST00000453850 223 ntBASIC8.86□□□□□ -0.99
ERCC3P19447 DUXAP8-207ENST00000456786 622 ntBASIC8.86□□□□□ -0.99
ERCC3P19447 RPL7AP30-201ENST00000482859 796 ntBASIC8.86□□□□□ -0.99
ERCC3P19447 RN7SL516P-201ENST00000496127 297 ntBASIC8.86□□□□□ -0.99
ERCC3P19447 RN7SL388P-201ENST00000498736 339 ntBASIC8.86□□□□□ -0.99
ERCC3P19447 AC113352.1-201ENST00000513196 666 ntBASIC8.86□□□□□ -0.99
ERCC3P19447 AC016550.3-201ENST00000515706 767 ntBASIC8.86□□□□□ -0.99
ERCC3P19447 RNA5SP96-201ENST00000516041 107 ntBASIC8.86□□□□□ -0.99
ERCC3P19447 FLJ46284-202ENST00000521148 496 ntTSL 3 BASIC8.86□□□□□ -0.99
ERCC3P19447 AP001372.4-201ENST00000524889 472 ntBASIC8.86□□□□□ -0.99
ERCC3P19447 OR4A7P-201ENST00000531463 910 ntBASIC8.86□□□□□ -0.99
ERCC3P19447 AC108721.1-201ENST00000547088 348 ntTSL 3 BASIC8.86□□□□□ -0.99
ERCC3P19447 AL049780.1-201ENST00000554430 489 ntTSL 3 BASIC8.86□□□□□ -0.99
ERCC3P19447 ETFRF1-211ENST00000557540 1259 ntAPPRIS ALT1 TSL 2 BASIC8.86□□□□□ -0.99
ERCC3P19447 AC092757.2-201ENST00000559026 633 ntTSL 4 BASIC8.86□□□□□ -0.99
ERCC3P19447 TRIM69-210ENST00000561043 1017 ntTSL 3 BASIC8.86□□□□□ -0.99
ERCC3P19447 OR5AH1P-201ENST00000595968 283 ntBASIC8.86□□□□□ -0.99
ERCC3P19447 AC091057.3-201ENST00000602684 733 ntBASIC8.86□□□□□ -0.99
ERCC3P19447 DUXAP10-204ENST00000612052 616 ntBASIC8.86□□□□□ -0.99
ERCC3P19447 MIR6883-201ENST00000614952 78 ntBASIC8.86□□□□□ -0.99
ERCC3P19447 AC010538.1-201ENST00000615131 663 ntBASIC8.86□□□□□ -0.99
ERCC3P19447 SLC20A1P2-201ENST00000618036 966 ntBASIC8.86□□□□□ -0.99
ERCC3P19447 DCX-208ENST00000636035 9269 ntAPPRIS ALT1 TSL 2 BASIC8.86□□□□□ -0.99
ERCC3P19447 CHN2-208ENST00000412711 2991 ntTSL 2 BASIC8.86□□□□□ -0.99
ERCC3P19447 C12orf77-202ENST00000549262 1443 ntTSL 4 BASIC8.86□□□□□ -0.99
ERCC3P19447 AC009318.1-201ENST00000553105 2380 ntTSL 2 BASIC8.86□□□□□ -0.99
ERCC3P19447 NAT1-206ENST00000518029 2162 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
ERCC3P19447 BCL6-201ENST00000232014 2710 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
ERCC3P19447 CCDC30-202ENST00000342022 3098 ntAPPRIS P2 TSL 5 BASIC8.86□□□□□ -0.99
ERCC3P19447 RNF41-212ENST00000615206 5216 ntAPPRIS P1 TSL 5 BASIC8.86□□□□□ -0.99
ERCC3P19447 TDRD3-209ENST00000621840 2497 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
ERCC3P19447 CCDC77-202ENST00000412006 2253 ntAPPRIS ALT2 TSL 2 BASIC8.85□□□□□ -0.99
ERCC3P19447 DLG2-201ENST00000280241 7730 ntAPPRIS ALT2 TSL 5 BASIC8.85□□□□□ -0.99
ERCC3P19447 MIR4435-2HG-207ENST00000439362 1522 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
ERCC3P19447 CAP1-206ENST00000372805 2217 ntAPPRIS P3 TSL 1 (best) BASIC8.85□□□□□ -0.99
ERCC3P19447 FANCL-201ENST00000233741 1683 ntAPPRIS P3 TSL 1 (best) BASIC8.85□□□□□ -0.99
ERCC3P19447 FANCL-202ENST00000402135 1698 ntAPPRIS ALT1 TSL 2 BASIC8.85□□□□□ -0.99
ERCC3P19447 TFDP2-212ENST00000486111 2360 ntAPPRIS P3 TSL 1 (best) BASIC8.85□□□□□ -0.99
ERCC3P19447 RAD54B-202ENST00000336148 3068 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
ERCC3P19447 AC145138.1-201ENST00000512908 2851 ntBASIC8.85□□□□□ -0.99
ERCC3P19447 DDX1-208ENST00000621973 2183 ntTSL 5 BASIC8.85□□□□□ -0.99
ERCC3P19447 CTNND1-222ENST00000529919 4780 ntTSL 5 BASIC8.85□□□□□ -0.99
ERCC3P19447 TAF1-203ENST00000373790 7629 ntAPPRIS ALT2 TSL 1 (best) BASIC8.85□□□□□ -0.99
ERCC3P19447 SLC38A1-211ENST00000612161 1607 ntTSL 5 BASIC8.85□□□□□ -0.99
ERCC3P19447 MAML3-201ENST00000398940 831 ntTSL 5 BASIC8.85□□□□□ -0.99
ERCC3P19447 RERE-203ENST00000400907 2973 ntTSL 5 BASIC8.85□□□□□ -0.99
ERCC3P19447 CEACAM1-208ENST00000403461 1263 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
ERCC3P19447 METTL5-205ENST00000409837 936 ntAPPRIS ALT1 TSL 1 (best) BASIC8.85□□□□□ -0.99
ERCC3P19447 CYTOR-207ENST00000414584 772 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
Retrieved 100 of 98,524 protein–RNA pairs in 89.8 ms