Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 AP001960.1-201ENST00000506494 658 ntBASIC6.72□□□□□ -1.33
SNX18Q96RF0 AC093831.1-201ENST00000509166 434 ntTSL 3 BASIC6.72□□□□□ -1.33
SNX18Q96RF0 SFTA3-210ENST00000521945 1116 ntTSL 2 BASIC6.72□□□□□ -1.33
SNX18Q96RF0 AC022679.2-201ENST00000522186 813 ntTSL 2 BASIC6.72□□□□□ -1.33
SNX18Q96RF0 LINC00964-204ENST00000528090 572 ntTSL 4 BASIC6.72□□□□□ -1.33
SNX18Q96RF0 LINC02443-201ENST00000536518 585 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
SNX18Q96RF0 CHCHD3P2-201ENST00000550751 639 ntBASIC6.72□□□□□ -1.33
SNX18Q96RF0 AC004817.1-201ENST00000553621 721 ntTSL 4 BASIC6.72□□□□□ -1.33
SNX18Q96RF0 AL355076.3-201ENST00000555838 587 ntBASIC6.72□□□□□ -1.33
SNX18Q96RF0 AC009269.5-201ENST00000557800 755 ntTSL 3 BASIC6.72□□□□□ -1.33
SNX18Q96RF0 AL731537.2-201ENST00000561565 951 ntBASIC6.72□□□□□ -1.33
SNX18Q96RF0 BMS1P8-201ENST00000565049 1178 ntBASIC6.72□□□□□ -1.33
SNX18Q96RF0 AC011468.1-201ENST00000569091 675 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
SNX18Q96RF0 AC005410.2-201ENST00000580270 463 ntTSL 3 BASIC6.72□□□□□ -1.33
SNX18Q96RF0 ZNF227-204ENST00000586228 569 ntTSL 2 BASIC6.72□□□□□ -1.33
SNX18Q96RF0 ANKRD20A19P-203ENST00000602724 295 ntBASIC6.72□□□□□ -1.33
SNX18Q96RF0 AL021918.1-201ENST00000603933 236 ntBASIC6.72□□□□□ -1.33
SNX18Q96RF0 AL136985.2-201ENST00000607372 535 ntBASIC6.72□□□□□ -1.33
SNX18Q96RF0 OR6L2P-201ENST00000608207 925 ntBASIC6.72□□□□□ -1.33
SNX18Q96RF0 Metazoa_SRP.123-201ENST00000616695 286 ntBASIC6.72□□□□□ -1.33
SNX18Q96RF0 MIAT_exon1.1-201ENST00000617016 135 ntBASIC6.72□□□□□ -1.33
SNX18Q96RF0 SPINK6-203ENST00000621437 605 ntAPPRIS P1 TSL 3 BASIC6.72□□□□□ -1.33
SNX18Q96RF0 AC007204.1-201ENST00000621794 555 ntBASIC6.72□□□□□ -1.33
SNX18Q96RF0 AL139254.3-201ENST00000641097 674 ntBASIC6.72□□□□□ -1.33
SNX18Q96RF0 KCNAB1-212ENST00000490337 3122 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
SNX18Q96RF0 Z93022.1-201ENST00000433228 1554 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
SNX18Q96RF0 AC007923.2-201ENST00000584218 1591 ntBASIC6.72□□□□□ -1.33
SNX18Q96RF0 KLF18-201ENST00000634670 3159 ntAPPRIS P1 TSL 5 BASIC6.72□□□□□ -1.33
SNX18Q96RF0 SLC9A9-201ENST00000316549 3627 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
SNX18Q96RF0 GBA3-206ENST00000610628 2154 ntAPPRIS ALT2 TSL 5 BASIC6.72□□□□□ -1.33
SNX18Q96RF0 BTBD7-208ENST00000555525 2328 ntTSL 5 BASIC6.72□□□□□ -1.33
SNX18Q96RF0 NFIA-201ENST00000357977 3200 ntTSL 2 BASIC6.72□□□□□ -1.33
SNX18Q96RF0 TRIM64EP-201ENST00000531233 1307 ntBASIC6.72□□□□□ -1.33
SNX18Q96RF0 SPATA31A1-201ENST00000377647 4256 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
SNX18Q96RF0 SPATA31A7-206ENST00000619167 4256 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
SNX18Q96RF0 LGI1-219ENST00000636155 1618 ntTSL 5 BASIC6.72□□□□□ -1.33
SNX18Q96RF0 ZBTB21-205ENST00000398511 5608 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
SNX18Q96RF0 NOX1-204ENST00000372966 2529 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
SNX18Q96RF0 A1CF-206ENST00000395489 9517 ntTSL 2 BASIC6.72□□□□□ -1.33
SNX18Q96RF0 VCAN-202ENST00000342785 7154 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
SNX18Q96RF0 PTPRT-209ENST00000612229 11285 ntTSL 5 BASIC6.71□□□□□ -1.33
SNX18Q96RF0 PHC3-203ENST00000467570 2595 ntTSL 2 BASIC6.71□□□□□ -1.33
SNX18Q96RF0 NHEJ1-202ENST00000409720 1954 ntTSL 5 BASIC6.71□□□□□ -1.33
SNX18Q96RF0 CR1-203ENST00000367051 7469 ntTSL 5 BASIC6.71□□□□□ -1.33
SNX18Q96RF0 GPRIN3-201ENST00000333209 6260 ntAPPRIS P1 BASIC6.71□□□□□ -1.33
SNX18Q96RF0 NFATC3-201ENST00000329524 6144 ntTSL 1 (best) BASIC6.71□□□□□ -1.33
SNX18Q96RF0 RBMXL1-201ENST00000321792 4799 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.33
SNX18Q96RF0 MTRF1-203ENST00000379480 2185 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.33
SNX18Q96RF0 BVES-AS1-202ENST00000369122 1716 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
SNX18Q96RF0 TCP11X2-202ENST00000453326 1747 ntAPPRIS P1 TSL 2 BASIC6.71□□□□□ -1.34
SNX18Q96RF0 TCP11X1-201ENST00000597070 1747 ntTSL 2 BASIC6.71□□□□□ -1.34
SNX18Q96RF0 ZNF121-201ENST00000320451 1563 ntAPPRIS P1 TSL 3 BASIC6.71□□□□□ -1.34
SNX18Q96RF0 SLC7A6-209ENST00000566454 6308 ntAPPRIS P1 TSL 5 BASIC6.71□□□□□ -1.34
SNX18Q96RF0 NPY5R-202ENST00000506953 1418 ntAPPRIS P1 BASIC6.71□□□□□ -1.34
SNX18Q96RF0 ZMYM2-202ENST00000382871 5051 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
SNX18Q96RF0 IL36B-201ENST00000259213 1186 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
SNX18Q96RF0 RNA5SP463-201ENST00000363030 120 ntBASIC6.71□□□□□ -1.34
SNX18Q96RF0 ARV1-202ENST00000366658 1170 ntTSL 5 BASIC6.71□□□□□ -1.34
SNX18Q96RF0 AL139327.1-201ENST00000382988 348 ntBASIC6.71□□□□□ -1.34
SNX18Q96RF0 RPL24P7-201ENST00000399435 453 ntBASIC6.71□□□□□ -1.34
SNX18Q96RF0 MIR1231-201ENST00000408101 92 ntBASIC6.71□□□□□ -1.34
SNX18Q96RF0 SULT1C4-202ENST00000409309 1045 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
SNX18Q96RF0 AC015987.1-201ENST00000419211 804 ntTSL 2 BASIC6.71□□□□□ -1.34
SNX18Q96RF0 PSMC1P2-201ENST00000423961 1204 ntBASIC6.71□□□□□ -1.34
SNX18Q96RF0 RPE-205ENST00000429907 925 ntTSL 2 BASIC6.71□□□□□ -1.34
SNX18Q96RF0 AC092167.1-201ENST00000435466 495 ntTSL 4 BASIC6.71□□□□□ -1.34
SNX18Q96RF0 SS18L2P1-201ENST00000445923 213 ntBASIC6.71□□□□□ -1.34
SNX18Q96RF0 EAF2-202ENST00000451944 960 ntTSL 2 BASIC6.71□□□□□ -1.34
SNX18Q96RF0 CYCSP53-201ENST00000455540 265 ntBASIC6.71□□□□□ -1.34
SNX18Q96RF0 AC009955.1-201ENST00000455896 271 ntTSL 5 BASIC6.71□□□□□ -1.34
SNX18Q96RF0 RPL10P6-201ENST00000457497 318 ntBASIC6.71□□□□□ -1.34
SNX18Q96RF0 RN7SL861P-201ENST00000473793 285 ntBASIC6.71□□□□□ -1.34
SNX18Q96RF0 ZBED3-AS1-203ENST00000504506 702 ntTSL 3 BASIC6.71□□□□□ -1.34
SNX18Q96RF0 AC021088.1-201ENST00000506519 805 ntTSL 3 BASIC6.71□□□□□ -1.34
SNX18Q96RF0 ENPP7P3-201ENST00000509123 241 ntBASIC6.71□□□□□ -1.34
SNX18Q96RF0 CCNHP1-201ENST00000513311 678 ntBASIC6.71□□□□□ -1.34
SNX18Q96RF0 PRR13-204ENST00000547368 688 ntAPPRIS ALT2 TSL 3 BASIC6.71□□□□□ -1.34
SNX18Q96RF0 AC138749.2-201ENST00000566048 167 ntBASIC6.71□□□□□ -1.34
SNX18Q96RF0 DLGAP1-AS3-201ENST00000577649 1258 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
SNX18Q96RF0 AC006441.1-201ENST00000581083 437 ntTSL 5 BASIC6.71□□□□□ -1.34
SNX18Q96RF0 AC015923.1-202ENST00000581421 491 ntTSL 2 BASIC6.71□□□□□ -1.34
SNX18Q96RF0 RN7SL25P-201ENST00000583862 260 ntBASIC6.71□□□□□ -1.34
SNX18Q96RF0 NUTM2B-AS1-209ENST00000596088 366 ntTSL 3 BASIC6.71□□□□□ -1.34
SNX18Q96RF0 Z98949.1-208ENST00000597614 816 ntTSL 5 BASIC6.71□□□□□ -1.34
SNX18Q96RF0 AL109918.2-201ENST00000605188 279 ntBASIC6.71□□□□□ -1.34
SNX18Q96RF0 AC010894.2-203ENST00000606406 499 ntTSL 3 BASIC6.71□□□□□ -1.34
SNX18Q96RF0 AC016394.1-201ENST00000608444 833 ntBASIC6.71□□□□□ -1.34
SNX18Q96RF0 HNF4A-AS1-202ENST00000609152 413 ntTSL 3 BASIC6.71□□□□□ -1.34
SNX18Q96RF0 LINC02019-202ENST00000609204 845 ntTSL 2 BASIC6.71□□□□□ -1.34
SNX18Q96RF0 AC004448.4-210ENST00000610229 833 ntTSL 5 BASIC6.71□□□□□ -1.34
SNX18Q96RF0 C18orf12-201ENST00000623329 537 ntBASIC6.71□□□□□ -1.34
SNX18Q96RF0 C8orf89-203ENST00000625134 507 ntAPPRIS ALT2 TSL 1 (best) BASIC6.71□□□□□ -1.34
SNX18Q96RF0 AL138924.1-201ENST00000629067 415 ntTSL 3 BASIC6.71□□□□□ -1.34
SNX18Q96RF0 AC092813.1-201ENST00000635455 969 ntTSL 5 BASIC6.71□□□□□ -1.34
SNX18Q96RF0 AC092646.2-201ENST00000431242 2095 ntBASIC6.71□□□□□ -1.34
SNX18Q96RF0 SCN2A-215ENST00000637266 8610 ntAPPRIS ALT1 TSL 5 BASIC6.71□□□□□ -1.34
SNX18Q96RF0 NAV3-202ENST00000536525 7386 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
SNX18Q96RF0 CABYR-206ENST00000463087 1792 ntAPPRIS P4 TSL 5 BASIC6.71□□□□□ -1.34
SNX18Q96RF0 HEPH-202ENST00000343002 4854 ntAPPRIS ALT2 TSL 1 (best) BASIC6.71□□□□□ -1.34
SNX18Q96RF0 FAM221B-203ENST00000423537 2931 ntAPPRIS P2 TSL 1 (best) BASIC6.71□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 89.6 ms