Protein–RNA interactions for Protein: P58876

HIST1H2BD, Histone H2B type 1-D, humanhuman

Predictions only

Length 126 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H2BDP58876 FBXW7-207ENST00000603841 2261 ntAPPRIS P4 TSL 1 (best) BASIC5.09□□□□□ -1.59
HIST1H2BDP58876 SSH2-204ENST00000540801 4538 ntAPPRIS ALT2 TSL 2 BASIC5.09□□□□□ -1.59
HIST1H2BDP58876 RASSF8-213ENST00000542865 2219 ntAPPRIS P1 TSL 2 BASIC5.09□□□□□ -1.59
HIST1H2BDP58876 OR52A5-201ENST00000307388 3973 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
HIST1H2BDP58876 OR52A5-202ENST00000642125 3993 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
HIST1H2BDP58876 TRAT1-201ENST00000295756 1919 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
HIST1H2BDP58876 RPS20-205ENST00000519807 1826 ntTSL 2 BASIC5.09□□□□□ -1.59
HIST1H2BDP58876 MMP10-201ENST00000279441 1758 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
HIST1H2BDP58876 CEACAM1-201ENST00000161559 3519 ntAPPRIS P3 TSL 1 (best) BASIC5.09□□□□□ -1.59
HIST1H2BDP58876 MAPK10-338ENST00000641647 3362 ntBASIC5.09□□□□□ -1.59
HIST1H2BDP58876 AC027313.1-201ENST00000509159 1666 ntBASIC5.09□□□□□ -1.59
HIST1H2BDP58876 INO80D-201ENST00000403263 14136 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
HIST1H2BDP58876 AC140479.2-201ENST00000421567 3130 ntBASIC5.09□□□□□ -1.59
HIST1H2BDP58876 MCF2L2-202ENST00000414362 3031 ntTSL 2 BASIC5.09□□□□□ -1.59
HIST1H2BDP58876 TRIM22-201ENST00000379965 2989 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
HIST1H2BDP58876 CCDC18-AS1-205ENST00000421202 2973 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
HIST1H2BDP58876 GJA10-203ENST00000638915 1479 ntAPPRIS ALT2 TSL 5 BASIC5.09□□□□□ -1.59
HIST1H2BDP58876 ZNF233-205ENST00000592581 2938 ntTSL 2 BASIC5.09□□□□□ -1.59
HIST1H2BDP58876 FAM122C-202ENST00000370785 1344 ntAPPRIS P3 TSL 1 (best) BASIC5.09□□□□□ -1.59
HIST1H2BDP58876 CFI-207ENST00000618244 1345 ntTSL 5 BASIC5.09□□□□□ -1.59
HIST1H2BDP58876 NLRP8-201ENST00000291971 3934 ntAPPRIS P3 TSL 1 (best) BASIC5.09□□□□□ -1.59
HIST1H2BDP58876 HIST1H1A-201ENST00000244573 648 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
HIST1H2BDP58876 AC211476.4-201ENST00000275546 699 ntBASIC5.09□□□□□ -1.59
HIST1H2BDP58876 RBP7-201ENST00000294435 636 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
HIST1H2BDP58876 SNORA5C-201ENST00000364902 137 ntBASIC5.09□□□□□ -1.59
HIST1H2BDP58876 C9orf92-202ENST00000380685 379 ntAPPRIS ALT2 TSL 2 BASIC5.09□□□□□ -1.59
HIST1H2BDP58876 UBB-202ENST00000395837 1014 ntAPPRIS P1 TSL 2 BASIC5.09□□□□□ -1.59
HIST1H2BDP58876 PMS2P5-201ENST00000398065 516 ntBASIC5.09□□□□□ -1.59
HIST1H2BDP58876 RPL5P35-201ENST00000398869 816 ntBASIC5.09□□□□□ -1.59
HIST1H2BDP58876 AL627402.1-201ENST00000405276 735 ntBASIC5.09□□□□□ -1.59
HIST1H2BDP58876 EPPIN-203ENST00000409554 998 ntTSL 5 BASIC5.09□□□□□ -1.59
HIST1H2BDP58876 NR1I3-208ENST00000412844 989 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
HIST1H2BDP58876 AL160163.1-201ENST00000417465 403 ntTSL 3 BASIC5.09□□□□□ -1.59
HIST1H2BDP58876 BX119904.3-201ENST00000428194 957 ntBASIC5.09□□□□□ -1.59
HIST1H2BDP58876 RPL12P16-201ENST00000431098 498 ntBASIC5.09□□□□□ -1.59
HIST1H2BDP58876 AC007179.2-206ENST00000434611 467 ntTSL 3 BASIC5.09□□□□□ -1.59
HIST1H2BDP58876 LINC01422-202ENST00000438113 517 ntTSL 5 BASIC5.09□□□□□ -1.59
HIST1H2BDP58876 MRPL22-202ENST00000439747 784 ntTSL 2 BASIC5.09□□□□□ -1.59
HIST1H2BDP58876 TCAIM-208ENST00000444602 1056 ntTSL 2 BASIC5.09□□□□□ -1.59
HIST1H2BDP58876 AL157714.1-201ENST00000448964 625 ntBASIC5.09□□□□□ -1.59
HIST1H2BDP58876 AC239859.3-201ENST00000456469 408 ntTSL 5 BASIC5.09□□□□□ -1.59
HIST1H2BDP58876 PA2G4P4-201ENST00000473864 1182 ntBASIC5.09□□□□□ -1.59
HIST1H2BDP58876 RN7SL520P-201ENST00000474110 286 ntBASIC5.09□□□□□ -1.59
HIST1H2BDP58876 RPL12P6-201ENST00000495231 498 ntBASIC5.09□□□□□ -1.59
HIST1H2BDP58876 AC006499.7-201ENST00000512421 1117 ntBASIC5.09□□□□□ -1.59
HIST1H2BDP58876 AC226119.2-201ENST00000513501 530 ntBASIC5.09□□□□□ -1.59
HIST1H2BDP58876 AC122713.1-201ENST00000518368 1015 ntBASIC5.09□□□□□ -1.59
HIST1H2BDP58876 H2AFV-208ENST00000521529 439 ntTSL 5 BASIC5.09□□□□□ -1.59
HIST1H2BDP58876 CASC21-201ENST00000521586 290 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
HIST1H2BDP58876 ATOX1-205ENST00000522314 724 ntTSL 2 BASIC5.09□□□□□ -1.59
HIST1H2BDP58876 AP001124.1-201ENST00000529628 385 ntBASIC5.09□□□□□ -1.59
HIST1H2BDP58876 AC110058.1-201ENST00000530389 563 ntTSL 4 BASIC5.09□□□□□ -1.59
HIST1H2BDP58876 RNASE11-208ENST00000555841 886 ntAPPRIS P2 TSL 1 (best) BASIC5.09□□□□□ -1.59
HIST1H2BDP58876 ARL6IP1-204ENST00000562819 578 ntTSL 5 BASIC5.09□□□□□ -1.59
HIST1H2BDP58876 AC004232.1-201ENST00000571388 208 ntBASIC5.09□□□□□ -1.59
HIST1H2BDP58876 AC005856.1-201ENST00000585921 286 ntTSL 3 BASIC5.09□□□□□ -1.59
HIST1H2BDP58876 AC090241.1-201ENST00000587732 621 ntBASIC5.09□□□□□ -1.59
HIST1H2BDP58876 NAPA-AS1-202ENST00000594367 630 ntTSL 2 BASIC5.09□□□□□ -1.59
HIST1H2BDP58876 AC097376.1-201ENST00000602907 997 ntBASIC5.09□□□□□ -1.59
HIST1H2BDP58876 LSM1P2-201ENST00000604911 322 ntBASIC5.09□□□□□ -1.59
HIST1H2BDP58876 DUSP22-216ENST00000605863 551 ntTSL 4 BASIC5.09□□□□□ -1.59
HIST1H2BDP58876 Metazoa_SRP.46-201ENST00000611137 251 ntBASIC5.09□□□□□ -1.59
HIST1H2BDP58876 AC010333.3-201ENST00000615100 402 ntBASIC5.09□□□□□ -1.59
HIST1H2BDP58876 ST7-OT4_3.1-201ENST00000615542 293 ntBASIC5.09□□□□□ -1.59
HIST1H2BDP58876 BACH1-AS1-202ENST00000615718 700 ntTSL 5 BASIC5.09□□□□□ -1.59
HIST1H2BDP58876 AP000550.3-201ENST00000637734 379 ntBASIC5.09□□□□□ -1.59
HIST1H2BDP58876 AL450332.1-203ENST00000638742 1268 ntTSL 5 BASIC5.09□□□□□ -1.59
HIST1H2BDP58876 HHLA2-209ENST00000489514 2406 ntAPPRIS P3 TSL 1 (best) BASIC5.09□□□□□ -1.59
HIST1H2BDP58876 LINC01677-205ENST00000635636 2362 ntTSL 5 BASIC5.09□□□□□ -1.59
HIST1H2BDP58876 PLS3-201ENST00000289290 2277 ntTSL 2 BASIC5.09□□□□□ -1.59
HIST1H2BDP58876 TRIP12-204ENST00000389045 5355 ntAPPRIS ALT2 TSL 1 (best) BASIC5.09□□□□□ -1.59
HIST1H2BDP58876 AP001284.1-201ENST00000528393 2118 ntBASIC5.09□□□□□ -1.59
HIST1H2BDP58876 RIC3-202ENST00000335425 5223 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
HIST1H2BDP58876 AL360014.1-201ENST00000562922 2084 ntTSL 3 BASIC5.09□□□□□ -1.59
HIST1H2BDP58876 RBPJ-202ENST00000342320 5761 ntAPPRIS P3 TSL 1 (best) BASIC5.09□□□□□ -1.6
HIST1H2BDP58876 TCF7L2-210ENST00000369397 3802 ntAPPRIS P3 TSL 1 (best) BASIC5.09□□□□□ -1.6
HIST1H2BDP58876 AMY1B-201ENST00000330330 1862 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.6
HIST1H2BDP58876 ACPP-202ENST00000351273 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC5.09□□□□□ -1.6
HIST1H2BDP58876 ESRRG-221ENST00000493603 5304 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.6
HIST1H2BDP58876 PLCE1-AS2-202ENST00000432782 1612 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
HIST1H2BDP58876 RNASEL-202ENST00000539397 4046 ntTSL 2 BASIC5.08□□□□□ -1.6
HIST1H2BDP58876 Z93022.1-201ENST00000433228 1554 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
HIST1H2BDP58876 USP46-202ENST00000451218 4622 ntTSL 5 BASIC5.08□□□□□ -1.6
HIST1H2BDP58876 COPB2-205ENST00000507777 3034 ntTSL 2 BASIC5.08□□□□□ -1.6
HIST1H2BDP58876 PARD3B-214ENST00000622699 7442 ntTSL 5 BASIC5.08□□□□□ -1.6
HIST1H2BDP58876 MUC12-206ENST00000536621 16321 ntAPPRIS P2 TSL 5 BASIC5.08□□□□□ -1.6
HIST1H2BDP58876 PTPRC-209ENST00000442510 5164 ntAPPRIS P4 TSL 1 (best) BASIC5.08□□□□□ -1.6
HIST1H2BDP58876 CDC42-201ENST00000315554 1452 ntAPPRIS P5 TSL 1 (best) BASIC5.08□□□□□ -1.6
HIST1H2BDP58876 FGL2-201ENST00000248598 4261 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
HIST1H2BDP58876 SCHLAP1-201ENST00000629145 1436 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
HIST1H2BDP58876 MSR1-204ENST00000381998 2826 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
HIST1H2BDP58876 PSMC1P12-201ENST00000436509 1314 ntBASIC5.08□□□□□ -1.6
HIST1H2BDP58876 TRDMT1-210ENST00000488990 1301 ntTSL 2 BASIC5.08□□□□□ -1.6
HIST1H2BDP58876 CASP5-208ENST00000526056 1344 ntTSL 5 BASIC5.08□□□□□ -1.6
HIST1H2BDP58876 RNA5SP442-201ENST00000365050 107 ntBASIC5.08□□□□□ -1.6
HIST1H2BDP58876 RN7SKP81-201ENST00000365603 331 ntBASIC5.08□□□□□ -1.6
HIST1H2BDP58876 C6orf106-201ENST00000374021 916 ntAPPRIS ALT2 TSL 3 BASIC5.08□□□□□ -1.6
HIST1H2BDP58876 TRAJ25-201ENST00000390512 60 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
HIST1H2BDP58876 AC084816.1-201ENST00000413794 565 ntTSL 4 BASIC5.08□□□□□ -1.6
HIST1H2BDP58876 RPL5P28-201ENST00000418634 693 ntBASIC5.08□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 77.7 ms