Protein–RNA interactions for Protein: P06340

HLA-DOA, HLA class II histocompatibility antigen, DO alpha chain, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOAP06340 TTC39C-204ENST00000577185 533 ntTSL 3 BASIC8.35□□□□□ -1.07
HLA-DOAP06340 AC138207.8-206ENST00000580053 637 ntTSL 5 BASIC8.35□□□□□ -1.07
HLA-DOAP06340 AP005202.2-201ENST00000582386 658 ntTSL 3 BASIC8.35□□□□□ -1.07
HLA-DOAP06340 AC011824.1-201ENST00000584863 561 ntTSL 4 BASIC8.35□□□□□ -1.07
HLA-DOAP06340 AC011476.3-203ENST00000586961 346 ntTSL 5 BASIC8.35□□□□□ -1.07
HLA-DOAP06340 AC006213.5-201ENST00000619673 288 ntBASIC8.35□□□□□ -1.07
HLA-DOAP06340 AL353572.3-201ENST00000636536 670 ntAPPRIS P1 BASIC8.35□□□□□ -1.07
HLA-DOAP06340 MBD5-221ENST00000637159 902 ntTSL 5 BASIC8.35□□□□□ -1.07
HLA-DOAP06340 GOSR2-221ENST00000638892 3808 ntTSL 5 BASIC8.35□□□□□ -1.07
HLA-DOAP06340 CEP290-207ENST00000552810 7948 ntAPPRIS P2 TSL 1 (best) BASIC8.35□□□□□ -1.07
HLA-DOAP06340 KIAA1524-207ENST00000619684 2839 ntAPPRIS ALT1 TSL 5 BASIC8.35□□□□□ -1.07
HLA-DOAP06340 OR5A2-201ENST00000302040 6318 ntAPPRIS P1 BASIC8.35□□□□□ -1.07
HLA-DOAP06340 SLC35A3-201ENST00000370153 5708 ntTSL 5 BASIC8.35□□□□□ -1.07
HLA-DOAP06340 NEUROD4-201ENST00000242994 3953 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
HLA-DOAP06340 CDK19-203ENST00000413605 6007 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
HLA-DOAP06340 CD300E-201ENST00000392619 3501 ntAPPRIS P2 TSL 1 (best) BASIC8.35□□□□□ -1.07
HLA-DOAP06340 BLNK-203ENST00000413476 1599 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
HLA-DOAP06340 MATR3-203ENST00000502499 2664 ntTSL 5 BASIC8.35□□□□□ -1.07
HLA-DOAP06340 HNRNPR-210ENST00000478691 7646 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
HLA-DOAP06340 TRIM53CP-201ENST00000531490 1354 ntBASIC8.35□□□□□ -1.07
HLA-DOAP06340 GPX6-201ENST00000361902 1712 ntAPPRIS P2 TSL 1 (best) BASIC8.34□□□□□ -1.07
HLA-DOAP06340 AC004023.1-201ENST00000561473 1744 ntBASIC8.34□□□□□ -1.07
HLA-DOAP06340 GPX6-204ENST00000612264 1709 ntAPPRIS ALT1 TSL 5 BASIC8.34□□□□□ -1.07
HLA-DOAP06340 FAR2P1-201ENST00000325390 3679 ntTSL 5 BASIC8.34□□□□□ -1.07
HLA-DOAP06340 ZNF658-206ENST00000621410 4025 ntAPPRIS P1 TSL 2 BASIC8.34□□□□□ -1.07
HLA-DOAP06340 GUCY2C-201ENST00000261170 3844 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
HLA-DOAP06340 TXNIP-204ENST00000582401 2926 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
HLA-DOAP06340 PDE4DIP-206ENST00000369356 8307 ntAPPRIS P4 TSL 1 (best) BASIC8.34□□□□□ -1.07
HLA-DOAP06340 SOD2-211ENST00000538183 14266 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
HLA-DOAP06340 DCHS2-207ENST00000623607 8912 ntAPPRIS P2 TSL 1 (best) BASIC8.34□□□□□ -1.07
HLA-DOAP06340 RALYL-204ENST00000518566 2682 ntAPPRIS ALT2 TSL 2 BASIC8.34□□□□□ -1.07
HLA-DOAP06340 CDY19P-201ENST00000411668 1613 ntBASIC8.34□□□□□ -1.07
HLA-DOAP06340 CDY18P-201ENST00000438294 1609 ntBASIC8.34□□□□□ -1.07
HLA-DOAP06340 RBM43-201ENST00000331426 4192 ntAPPRIS P2 TSL 1 (best) BASIC8.34□□□□□ -1.07
HLA-DOAP06340 ATP5EP2-201ENST00000381026 385 ntAPPRIS P1 BASIC8.34□□□□□ -1.07
HLA-DOAP06340 AC006511.2-201ENST00000388966 660 ntBASIC8.34□□□□□ -1.07
HLA-DOAP06340 HIBCH-207ENST00000410045 854 ntTSL 3 BASIC8.34□□□□□ -1.07
HLA-DOAP06340 CCDC148-AS1-201ENST00000412781 795 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
HLA-DOAP06340 KCND3-AS1-202ENST00000427471 583 ntTSL 3 BASIC8.34□□□□□ -1.07
HLA-DOAP06340 AL121916.1-201ENST00000429405 308 ntBASIC8.34□□□□□ -1.07
HLA-DOAP06340 AC018804.1-201ENST00000430381 618 ntBASIC8.34□□□□□ -1.07
HLA-DOAP06340 KRTAP3-4P-201ENST00000430780 280 ntBASIC8.34□□□□□ -1.07
HLA-DOAP06340 AC234771.4-201ENST00000441416 730 ntBASIC8.34□□□□□ -1.07
HLA-DOAP06340 LINC01771-201ENST00000445039 567 ntTSL 4 BASIC8.34□□□□□ -1.07
HLA-DOAP06340 PRDX1P1-201ENST00000449329 596 ntBASIC8.34□□□□□ -1.07
HLA-DOAP06340 AL391422.2-202ENST00000454396 347 ntTSL 5 BASIC8.34□□□□□ -1.07
HLA-DOAP06340 KC877392.1-201ENST00000524855 426 ntTSL 3 BASIC8.34□□□□□ -1.07
HLA-DOAP06340 ACER3-213ENST00000533873 929 ntTSL 2 BASIC8.34□□□□□ -1.07
HLA-DOAP06340 AL136084.2-214ENST00000587726 716 ntTSL 5 BASIC8.34□□□□□ -1.07
HLA-DOAP06340 NQO2-209ENST00000606474 470 ntTSL 3 BASIC8.34□□□□□ -1.07
HLA-DOAP06340 CCL15-204ENST00000617897 1073 ntAPPRIS P2 TSL 1 (best) BASIC8.34□□□□□ -1.07
HLA-DOAP06340 MRPL57P3-201ENST00000619218 176 ntBASIC8.34□□□□□ -1.07
HLA-DOAP06340 CCDC152-201ENST00000361970 3431 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
HLA-DOAP06340 NXT2-203ENST00000372106 2562 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
HLA-DOAP06340 SLC15A2-205ENST00000489711 5673 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
HLA-DOAP06340 CPS1-201ENST00000233072 5821 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
HLA-DOAP06340 DOCK11-201ENST00000276202 6625 ntAPPRIS P2 TSL 1 (best) BASIC8.34□□□□□ -1.07
HLA-DOAP06340 AL353807.3-201ENST00000500626 2505 ntBASIC8.34□□□□□ -1.07
HLA-DOAP06340 TP63-207ENST00000418709 2810 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
HLA-DOAP06340 AC102941.1-201ENST00000567616 1537 ntBASIC8.34□□□□□ -1.08
HLA-DOAP06340 FBXO36-202ENST00000373652 3120 ntTSL 1 (best) BASIC8.34□□□□□ -1.08
HLA-DOAP06340 TSC22D1-212ENST00000611198 2877 ntTSL 2 BASIC8.33□□□□□ -1.08
HLA-DOAP06340 TSC22D1-213ENST00000622051 2872 ntTSL 2 BASIC8.33□□□□□ -1.08
HLA-DOAP06340 MID1-205ENST00000380785 6092 ntAPPRIS P1 TSL 2 BASIC8.33□□□□□ -1.08
HLA-DOAP06340 PRKAA1-201ENST00000296800 1134 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
HLA-DOAP06340 OR10D1P-201ENST00000355343 936 ntBASIC8.33□□□□□ -1.08
HLA-DOAP06340 FABP6-202ENST00000402432 572 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
HLA-DOAP06340 RN7SKP91-201ENST00000410852 288 ntBASIC8.33□□□□□ -1.08
HLA-DOAP06340 IGKV1OR2-3-201ENST00000411475 288 ntBASIC8.33□□□□□ -1.08
HLA-DOAP06340 AC002511.2-201ENST00000413796 450 ntTSL 2 BASIC8.33□□□□□ -1.08
HLA-DOAP06340 AL451164.1-201ENST00000417149 390 ntTSL 3 BASIC8.33□□□□□ -1.08
HLA-DOAP06340 BACH1-IT2-201ENST00000436529 806 ntTSL 5 BASIC8.33□□□□□ -1.08
HLA-DOAP06340 CFLAR-212ENST00000440180 1198 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
HLA-DOAP06340 AC106874.1-201ENST00000440495 646 ntTSL 3 BASIC8.33□□□□□ -1.08
HLA-DOAP06340 DPP10-AS1-202ENST00000448663 644 ntTSL 3 BASIC8.33□□□□□ -1.08
HLA-DOAP06340 AC009948.1-203ENST00000450044 793 ntTSL 3 BASIC8.33□□□□□ -1.08
HLA-DOAP06340 AC022080.2-201ENST00000452932 533 ntBASIC8.33□□□□□ -1.08
HLA-DOAP06340 NPM1P9-201ENST00000453156 844 ntBASIC8.33□□□□□ -1.08
HLA-DOAP06340 AGKP1-201ENST00000455254 1263 ntBASIC8.33□□□□□ -1.08
HLA-DOAP06340 BIRC6-AS1-201ENST00000455572 697 ntTSL 3 BASIC8.33□□□□□ -1.08
HLA-DOAP06340 AL049697.1-201ENST00000507897 2301 ntAPPRIS P1 TSL 2 BASIC8.33□□□□□ -1.08
HLA-DOAP06340 AC146944.3-201ENST00000509969 371 ntBASIC8.33□□□□□ -1.08
HLA-DOAP06340 AC083923.2-202ENST00000517773 498 ntTSL 3 BASIC8.33□□□□□ -1.08
HLA-DOAP06340 AP005902.2-201ENST00000518393 307 ntBASIC8.33□□□□□ -1.08
HLA-DOAP06340 IGLVV-66-201ENST00000523818 341 ntBASIC8.33□□□□□ -1.08
HLA-DOAP06340 FBLN5-205ENST00000556154 1875 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
HLA-DOAP06340 MIR3135A-201ENST00000578460 77 ntBASIC8.33□□□□□ -1.08
HLA-DOAP06340 MIR378C-201ENST00000578683 81 ntBASIC8.33□□□□□ -1.08
HLA-DOAP06340 AC011498.1-203ENST00000589066 359 ntTSL 3 BASIC8.33□□□□□ -1.08
HLA-DOAP06340 AC004448.4-210ENST00000610229 833 ntTSL 5 BASIC8.33□□□□□ -1.08
HLA-DOAP06340 AC011008.2-201ENST00000624866 3352 ntBASIC8.33□□□□□ -1.08
HLA-DOAP06340 AP001002.2-201ENST00000625137 386 ntBASIC8.33□□□□□ -1.08
HLA-DOAP06340 AC022021.1-201ENST00000634334 843 ntTSL 5 BASIC8.33□□□□□ -1.08
HLA-DOAP06340 AC087521.4-201ENST00000637427 289 ntTSL 5 BASIC8.33□□□□□ -1.08
HLA-DOAP06340 ADGRL3-206ENST00000507164 4982 ntTSL 5 BASIC8.33□□□□□ -1.08
HLA-DOAP06340 CR1-203ENST00000367051 7469 ntTSL 5 BASIC8.33□□□□□ -1.08
HLA-DOAP06340 CR1-204ENST00000367052 7469 ntTSL 5 BASIC8.33□□□□□ -1.08
HLA-DOAP06340 CR1-205ENST00000367053 7469 ntTSL 5 BASIC8.33□□□□□ -1.08
HLA-DOAP06340 ZMYND8-221ENST00000619049 4027 ntTSL 5 BASIC8.33□□□□□ -1.08
HLA-DOAP06340 ZC3H11B-201ENST00000367211 2994 ntAPPRIS P5 TSL 5 BASIC8.33□□□□□ -1.08
Retrieved 100 of 98,524 protein–RNA pairs in 8.1 ms