Protein–RNA interactions for Protein: A6NFN3

RBFOX3, RNA binding protein fox-1 homolog 3, humanhuman

Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX3A6NFN3 TCEAL8-202ENST00000372685 1222 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
RBFOX3A6NFN3 C6orf48-201ENST00000375633 586 ntAPPRIS P1 TSL 2 BASIC5.54□□□□□ -1.52
RBFOX3A6NFN3 CST11-201ENST00000377007 461 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
RBFOX3A6NFN3 IGHV1-24-201ENST00000390610 411 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
RBFOX3A6NFN3 RNU6-1055P-201ENST00000391085 107 ntBASIC5.54□□□□□ -1.52
RBFOX3A6NFN3 SNX24-202ENST00000395451 1050 ntTSL 3 BASIC5.54□□□□□ -1.52
RBFOX3A6NFN3 AL035467.1-201ENST00000403583 686 ntBASIC5.54□□□□□ -1.52
RBFOX3A6NFN3 AC243547.1-201ENST00000415065 408 ntTSL 2 BASIC5.54□□□□□ -1.52
RBFOX3A6NFN3 RPL5P28-201ENST00000418634 693 ntBASIC5.54□□□□□ -1.52
RBFOX3A6NFN3 AC245884.2-201ENST00000426257 404 ntBASIC5.54□□□□□ -1.52
RBFOX3A6NFN3 AL121902.1-201ENST00000426963 459 ntTSL 2 BASIC5.54□□□□□ -1.52
RBFOX3A6NFN3 LINC01827-201ENST00000432711 555 ntTSL 2 BASIC5.54□□□□□ -1.52
RBFOX3A6NFN3 BACE2-IT1-201ENST00000433378 382 ntTSL 5 BASIC5.54□□□□□ -1.52
RBFOX3A6NFN3 AL122003.1-201ENST00000435206 784 ntBASIC5.54□□□□□ -1.52
RBFOX3A6NFN3 LINC00570-203ENST00000437795 490 ntTSL 3 BASIC5.54□□□□□ -1.52
RBFOX3A6NFN3 AC022400.2-201ENST00000446730 866 ntTSL 2 BASIC5.54□□□□□ -1.52
RBFOX3A6NFN3 AL136452.1-201ENST00000448495 439 ntBASIC5.54□□□□□ -1.52
RBFOX3A6NFN3 AC013275.1-202ENST00000457436 501 ntTSL 3 BASIC5.54□□□□□ -1.52
RBFOX3A6NFN3 THUMPD3-AS1-205ENST00000481221 683 ntTSL 3 BASIC5.54□□□□□ -1.52
RBFOX3A6NFN3 AC097263.1-201ENST00000496795 606 ntBASIC5.54□□□□□ -1.52
RBFOX3A6NFN3 GAPDHP44-201ENST00000513513 1007 ntBASIC5.54□□□□□ -1.52
RBFOX3A6NFN3 LINC00589-202ENST00000518623 938 ntTSL 4 BASIC5.54□□□□□ -1.52
RBFOX3A6NFN3 AC084337.1-201ENST00000524809 686 ntBASIC5.54□□□□□ -1.52
RBFOX3A6NFN3 AP003049.2-201ENST00000532992 540 ntTSL 4 BASIC5.54□□□□□ -1.52
RBFOX3A6NFN3 AC048344.2-201ENST00000547280 147 ntBASIC5.54□□□□□ -1.52
RBFOX3A6NFN3 APEX1-214ENST00000557054 888 ntTSL 5 BASIC5.54□□□□□ -1.52
RBFOX3A6NFN3 AC004224.2-201ENST00000574423 529 ntTSL 5 BASIC5.54□□□□□ -1.52
RBFOX3A6NFN3 MIR3714-201ENST00000579507 65 ntBASIC5.54□□□□□ -1.52
RBFOX3A6NFN3 MIR4682-201ENST00000580643 80 ntBASIC5.54□□□□□ -1.52
RBFOX3A6NFN3 RN7SL49P-201ENST00000581392 298 ntBASIC5.54□□□□□ -1.52
RBFOX3A6NFN3 MIR4314-201ENST00000583321 92 ntBASIC5.54□□□□□ -1.52
RBFOX3A6NFN3 AC005899.5-201ENST00000584721 552 ntTSL 5 BASIC5.54□□□□□ -1.52
RBFOX3A6NFN3 ZNF559-205ENST00000586255 1016 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
RBFOX3A6NFN3 ZNF257-207ENST00000600162 817 ntTSL 3 BASIC5.54□□□□□ -1.52
RBFOX3A6NFN3 AC009686.2-201ENST00000607017 577 ntBASIC5.54□□□□□ -1.52
RBFOX3A6NFN3 AC114810.1-201ENST00000607415 473 ntBASIC5.54□□□□□ -1.52
RBFOX3A6NFN3 AP003121.1-201ENST00000609845 414 ntTSL 3 BASIC5.54□□□□□ -1.52
RBFOX3A6NFN3 AL138960.1-201ENST00000613838 513 ntBASIC5.54□□□□□ -1.52
RBFOX3A6NFN3 AC245033.3-201ENST00000617986 224 ntBASIC5.54□□□□□ -1.52
RBFOX3A6NFN3 OR1N1-202ENST00000619659 939 ntBASIC5.54□□□□□ -1.52
RBFOX3A6NFN3 MIR6754-201ENST00000621121 66 ntBASIC5.54□□□□□ -1.52
RBFOX3A6NFN3 AC004836.1-201ENST00000623032 634 ntBASIC5.54□□□□□ -1.52
RBFOX3A6NFN3 AP005242.3-201ENST00000623604 607 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
RBFOX3A6NFN3 AC120057.5-201ENST00000623840 154 ntBASIC5.54□□□□□ -1.52
RBFOX3A6NFN3 AC004943.1-203ENST00000624370 1074 ntBASIC5.54□□□□□ -1.52
RBFOX3A6NFN3 AC108477.1-201ENST00000636764 526 ntTSL 4 BASIC5.54□□□□□ -1.52
RBFOX3A6NFN3 STT3A-214ENST00000531491 2160 ntTSL 2 BASIC5.54□□□□□ -1.52
RBFOX3A6NFN3 SLC1A2-202ENST00000395750 11538 ntAPPRIS ALT1 TSL 1 (best) BASIC5.54□□□□□ -1.52
RBFOX3A6NFN3 PTER-202ENST00000378000 3777 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
RBFOX3A6NFN3 ZNF184-202ENST00000377419 2899 ntAPPRIS P1 TSL 4 BASIC5.54□□□□□ -1.52
RBFOX3A6NFN3 AJ009632.2-208ENST00000635525 4123 ntTSL 5 BASIC5.54□□□□□ -1.52
RBFOX3A6NFN3 KIAA1109-201ENST00000264501 15896 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
RBFOX3A6NFN3 RWDD1-204ENST00000487832 1427 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
RBFOX3A6NFN3 FANCD2-205ENST00000431693 2450 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
RBFOX3A6NFN3 RUFY3-202ENST00000381006 3098 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
RBFOX3A6NFN3 DMD-205ENST00000359836 7339 ntTSL 5 BASIC5.54□□□□□ -1.52
RBFOX3A6NFN3 GTF2H5-201ENST00000607778 7481 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
RBFOX3A6NFN3 CASP10-203ENST00000313728 1521 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
RBFOX3A6NFN3 PGM3-215ENST00000616566 5905 ntTSL 2 BASIC5.53□□□□□ -1.52
RBFOX3A6NFN3 POC1B-201ENST00000313546 3001 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
RBFOX3A6NFN3 AC006116.1-201ENST00000587908 2171 ntBASIC5.53□□□□□ -1.52
RBFOX3A6NFN3 DTHD1-206ENST00000639862 3819 ntTSL 5 BASIC5.53□□□□□ -1.52
RBFOX3A6NFN3 LINC00939-201ENST00000502479 4972 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
RBFOX3A6NFN3 ZC3H11B-201ENST00000367211 2994 ntAPPRIS P5 TSL 5 BASIC5.53□□□□□ -1.52
RBFOX3A6NFN3 OBSCN-201ENST00000284548 20432 ntTSL 2 BASIC5.53□□□□□ -1.52
RBFOX3A6NFN3 ADAMTS9-AS2-203ENST00000481312 1970 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
RBFOX3A6NFN3 LINC01043-201ENST00000565936 6897 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
RBFOX3A6NFN3 MECOM-209ENST00000472280 3593 ntTSL 5 BASIC5.53□□□□□ -1.52
RBFOX3A6NFN3 AC087258.1-203ENST00000545400 1629 ntTSL 2 BASIC5.53□□□□□ -1.52
RBFOX3A6NFN3 MPP5-204ENST00000555925 5006 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
RBFOX3A6NFN3 VPS13B-203ENST00000358544 14094 ntAPPRIS P4 TSL 1 (best) BASIC5.53□□□□□ -1.52
RBFOX3A6NFN3 GAGE2A-201ENST00000362097 528 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
RBFOX3A6NFN3 RNA5SP514-201ENST00000363717 111 ntBASIC5.53□□□□□ -1.52
RBFOX3A6NFN3 OR2AK2-201ENST00000366480 1154 ntAPPRIS ALT2 BASIC5.53□□□□□ -1.52
RBFOX3A6NFN3 FARP1-202ENST00000376581 1021 ntTSL 2 BASIC5.53□□□□□ -1.52
RBFOX3A6NFN3 RPL9P21-201ENST00000392269 505 ntBASIC5.53□□□□□ -1.52
RBFOX3A6NFN3 BMP2KL-201ENST00000414251 1225 ntBASIC5.53□□□□□ -1.52
RBFOX3A6NFN3 AL359475.1-201ENST00000414505 292 ntTSL 3 BASIC5.53□□□□□ -1.52
RBFOX3A6NFN3 OCM-202ENST00000416608 623 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
RBFOX3A6NFN3 MTRF1-204ENST00000430347 557 ntTSL 5 BASIC5.53□□□□□ -1.52
RBFOX3A6NFN3 AC244505.2-201ENST00000435089 759 ntBASIC5.53□□□□□ -1.52
RBFOX3A6NFN3 AL353653.1-202ENST00000435177 539 ntTSL 3 BASIC5.53□□□□□ -1.52
RBFOX3A6NFN3 ACTBP12-201ENST00000435871 418 ntBASIC5.53□□□□□ -1.52
RBFOX3A6NFN3 LINC01291-203ENST00000435984 565 ntTSL 3 BASIC5.53□□□□□ -1.52
RBFOX3A6NFN3 FUNDC2P2-202ENST00000443452 493 ntBASIC5.53□□□□□ -1.52
RBFOX3A6NFN3 AC013264.1-201ENST00000449346 455 ntTSL 2 BASIC5.53□□□□□ -1.52
RBFOX3A6NFN3 RN7SL263P-201ENST00000467969 290 ntBASIC5.53□□□□□ -1.52
RBFOX3A6NFN3 RN7SL36P-201ENST00000469345 276 ntBASIC5.53□□□□□ -1.52
RBFOX3A6NFN3 AC128716.1-201ENST00000475129 166 ntBASIC5.53□□□□□ -1.52
RBFOX3A6NFN3 RN7SL869P-201ENST00000497032 300 ntBASIC5.53□□□□□ -1.52
RBFOX3A6NFN3 BX293995.1-201ENST00000502880 755 ntBASIC5.53□□□□□ -1.52
RBFOX3A6NFN3 AC006499.1-201ENST00000511870 850 ntBASIC5.53□□□□□ -1.52
RBFOX3A6NFN3 LINC02428-203ENST00000513793 438 ntTSL 5 BASIC5.53□□□□□ -1.52
RBFOX3A6NFN3 EEF1B2P2-201ENST00000519625 676 ntBASIC5.53□□□□□ -1.52
RBFOX3A6NFN3 AC090103.1-201ENST00000520386 485 ntTSL 2 BASIC5.53□□□□□ -1.52
RBFOX3A6NFN3 AC087627.1-201ENST00000522339 993 ntTSL 3 BASIC5.53□□□□□ -1.52
RBFOX3A6NFN3 KCTD21-AS1-204ENST00000528468 554 ntTSL 4 BASIC5.53□□□□□ -1.52
RBFOX3A6NFN3 LINC02455-201ENST00000541881 496 ntTSL 3 BASIC5.53□□□□□ -1.52
RBFOX3A6NFN3 AC084033.2-201ENST00000551532 967 ntBASIC5.53□□□□□ -1.52
RBFOX3A6NFN3 AL160314.2-202ENST00000553792 534 ntTSL 5 BASIC5.53□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 106.4 ms