Protein–RNA interactions for Protein: Q9HC56

PCDH9, Protocadherin-9, humanhuman

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9Q9HC56 MAPK10-383ENST00000642032 3390 ntBASIC7.34□□□□□ -1.23
PCDH9Q9HC56 ADK-201ENST00000286621 1169 ntAPPRIS P4 TSL 1 (best) BASIC7.34□□□□□ -1.23
PCDH9Q9HC56 AL390195.1-202ENST00000416099 723 ntTSL 2 BASIC7.34□□□□□ -1.23
PCDH9Q9HC56 AL627308.2-201ENST00000420014 432 ntBASIC7.34□□□□□ -1.23
PCDH9Q9HC56 UQCRHP1-204ENST00000424609 274 ntBASIC7.34□□□□□ -1.23
PCDH9Q9HC56 NIP7P1-201ENST00000433227 512 ntBASIC7.34□□□□□ -1.23
PCDH9Q9HC56 ATP5LP4-201ENST00000434169 307 ntBASIC7.34□□□□□ -1.23
PCDH9Q9HC56 LINC00489-201ENST00000457816 543 ntTSL 5 BASIC7.34□□□□□ -1.23
PCDH9Q9HC56 AL049650.1-201ENST00000461548 823 ntAPPRIS P1 TSL 5 BASIC7.34□□□□□ -1.23
PCDH9Q9HC56 AC026254.2-201ENST00000475295 371 ntBASIC7.34□□□□□ -1.23
PCDH9Q9HC56 QTRT2-209ENST00000479882 1196 ntTSL 2 BASIC7.34□□□□□ -1.23
PCDH9Q9HC56 AC110772.1-201ENST00000503037 474 ntTSL 3 BASIC7.34□□□□□ -1.23
PCDH9Q9HC56 AC087360.1-201ENST00000518788 616 ntBASIC7.34□□□□□ -1.23
PCDH9Q9HC56 AC068790.1-201ENST00000536166 355 ntBASIC7.34□□□□□ -1.23
PCDH9Q9HC56 FXNP1-201ENST00000555153 337 ntBASIC7.34□□□□□ -1.23
PCDH9Q9HC56 RAB27A-205ENST00000564609 1057 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
PCDH9Q9HC56 AC023827.2-201ENST00000566880 1061 ntBASIC7.34□□□□□ -1.23
PCDH9Q9HC56 AC233699.1-201ENST00000569955 1168 ntBASIC7.34□□□□□ -1.23
PCDH9Q9HC56 RPS7P1-201ENST00000571702 585 ntBASIC7.34□□□□□ -1.23
PCDH9Q9HC56 AC006120.1-201ENST00000579375 546 ntBASIC7.34□□□□□ -1.23
PCDH9Q9HC56 AC068802.1-201ENST00000603420 732 ntBASIC7.34□□□□□ -1.23
PCDH9Q9HC56 HOTTIP_2.1-201ENST00000616633 376 ntBASIC7.34□□□□□ -1.23
PCDH9Q9HC56 EFCAB8-204ENST00000618684 435 ntTSL 5 BASIC7.34□□□□□ -1.23
PCDH9Q9HC56 LINC01427-203ENST00000635277 781 ntTSL 5 BASIC7.34□□□□□ -1.23
PCDH9Q9HC56 AC017000.1-201ENST00000639380 578 ntTSL 5 BASIC7.34□□□□□ -1.23
PCDH9Q9HC56 BEST3-202ENST00000330891 3532 ntAPPRIS P1 TSL 5 BASIC7.34□□□□□ -1.23
PCDH9Q9HC56 MACROD2-203ENST00000402914 4425 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
PCDH9Q9HC56 NBPF8-201ENST00000583271 5330 ntBASIC7.34□□□□□ -1.23
PCDH9Q9HC56 ZNF519-207ENST00000590202 2830 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
PCDH9Q9HC56 LINC01903-201ENST00000580659 2149 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
PCDH9Q9HC56 AC013268.3-201ENST00000262716 2324 ntBASIC7.34□□□□□ -1.23
PCDH9Q9HC56 AL365204.1-201ENST00000423440 1430 ntTSL 5 BASIC7.34□□□□□ -1.23
PCDH9Q9HC56 DPYD-202ENST00000370192 4412 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.24
PCDH9Q9HC56 SLC7A6-209ENST00000566454 6308 ntAPPRIS P1 TSL 5 BASIC7.34□□□□□ -1.24
PCDH9Q9HC56 AP2B1-215ENST00000616681 3267 ntTSL 2 BASIC7.33□□□□□ -1.24
PCDH9Q9HC56 PDZD2-202ENST00000438447 11704 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
PCDH9Q9HC56 CD163-201ENST00000359156 4268 ntAPPRIS P3 TSL 1 (best) BASIC7.33□□□□□ -1.24
PCDH9Q9HC56 CYP2C8-212ENST00000623108 1962 ntTSL 2 BASIC7.33□□□□□ -1.24
PCDH9Q9HC56 GOT2P1-201ENST00000440922 1309 ntBASIC7.33□□□□□ -1.24
PCDH9Q9HC56 CLTC-210ENST00000579456 2301 ntTSL 5 BASIC7.33□□□□□ -1.24
PCDH9Q9HC56 CSMD2-210ENST00000619121 13430 ntAPPRIS ALT2 TSL 5 BASIC7.33□□□□□ -1.24
PCDH9Q9HC56 LINC02547-201ENST00000531559 3308 ntTSL 2 BASIC7.33□□□□□ -1.24
PCDH9Q9HC56 PROM1-219ENST00000539194 3884 ntAPPRIS ALT2 TSL 5 BASIC7.33□□□□□ -1.24
PCDH9Q9HC56 OLR1-201ENST00000309539 2462 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
PCDH9Q9HC56 SPATA31B1P-201ENST00000434692 4016 ntBASIC7.33□□□□□ -1.24
PCDH9Q9HC56 BANF2-201ENST00000246090 595 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
PCDH9Q9HC56 SNORA70.8-201ENST00000384231 136 ntBASIC7.33□□□□□ -1.24
PCDH9Q9HC56 LINC02257-201ENST00000412445 605 ntTSL 2 BASIC7.33□□□□□ -1.24
PCDH9Q9HC56 NFU1P1-201ENST00000413128 774 ntBASIC7.33□□□□□ -1.24
PCDH9Q9HC56 LINC01704-201ENST00000414848 834 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
PCDH9Q9HC56 AC009229.2-201ENST00000417213 351 ntTSL 3 BASIC7.33□□□□□ -1.24
PCDH9Q9HC56 AL158070.1-201ENST00000421614 631 ntTSL 2 BASIC7.33□□□□□ -1.24
PCDH9Q9HC56 LIX1L-AS1-203ENST00000421764 287 ntTSL 2 BASIC7.33□□□□□ -1.24
PCDH9Q9HC56 CLIC4P3-201ENST00000422221 752 ntBASIC7.33□□□□□ -1.24
PCDH9Q9HC56 G6PC2-204ENST00000429379 645 ntTSL 2 BASIC7.33□□□□□ -1.24
PCDH9Q9HC56 CR391992.1-201ENST00000438601 394 ntBASIC7.33□□□□□ -1.24
PCDH9Q9HC56 LINC02243-201ENST00000441841 961 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
PCDH9Q9HC56 AC092421.1-201ENST00000448148 418 ntBASIC7.33□□□□□ -1.24
PCDH9Q9HC56 NDUFB4P1-201ENST00000462398 381 ntBASIC7.33□□□□□ -1.24
PCDH9Q9HC56 FOXP1-AS1-201ENST00000465742 700 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
PCDH9Q9HC56 AC026979.2-201ENST00000523733 583 ntTSL 5 BASIC7.33□□□□□ -1.24
PCDH9Q9HC56 AL161747.2-201ENST00000535893 472 ntTSL 5 BASIC7.33□□□□□ -1.24
PCDH9Q9HC56 AC084816.1-202ENST00000536744 647 ntTSL 2 BASIC7.33□□□□□ -1.24
PCDH9Q9HC56 ATP5J2P4-201ENST00000538774 267 ntBASIC7.33□□□□□ -1.24
PCDH9Q9HC56 AC078860.1-201ENST00000546601 527 ntTSL 2 BASIC7.33□□□□□ -1.24
PCDH9Q9HC56 OR5BK1P-201ENST00000550421 823 ntBASIC7.33□□□□□ -1.24
PCDH9Q9HC56 C14orf2-209ENST00000554880 707 ntAPPRIS P1 TSL 3 BASIC7.33□□□□□ -1.24
PCDH9Q9HC56 AC005070.1-201ENST00000603744 365 ntBASIC7.33□□□□□ -1.24
PCDH9Q9HC56 IZUMO3-203ENST00000604921 743 ntAPPRIS P2 TSL 5 BASIC7.33□□□□□ -1.24
PCDH9Q9HC56 IFNA5-201ENST00000610521 987 ntAPPRIS P1 BASIC7.33□□□□□ -1.24
PCDH9Q9HC56 ELMO2P1-201ENST00000611569 473 ntTSL 5 BASIC7.33□□□□□ -1.24
PCDH9Q9HC56 AC241377.2-201ENST00000612313 553 ntTSL 4 BASIC7.33□□□□□ -1.24
PCDH9Q9HC56 AL353747.4-202ENST00000625787 674 ntTSL 3 BASIC7.33□□□□□ -1.24
PCDH9Q9HC56 LINC01002-204ENST00000631644 473 ntTSL 5 BASIC7.33□□□□□ -1.24
PCDH9Q9HC56 LINC02341-201ENST00000637043 824 ntTSL 3 BASIC7.33□□□□□ -1.24
PCDH9Q9HC56 LINC00598-211ENST00000636621 3241 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
PCDH9Q9HC56 IBTK-201ENST00000306270 6054 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
PCDH9Q9HC56 RASSF9-201ENST00000361228 5682 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
PCDH9Q9HC56 SYT4-201ENST00000255224 4110 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
PCDH9Q9HC56 MYOF-202ENST00000359263 6719 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
PCDH9Q9HC56 ADI1-202ENST00000382093 3870 ntTSL 2 BASIC7.33□□□□□ -1.24
PCDH9Q9HC56 DCP2-201ENST00000389063 8947 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
PCDH9Q9HC56 FAM111B-201ENST00000343597 3488 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
PCDH9Q9HC56 AC016831.1-201ENST00000432045 6411 ntTSL 2 BASIC7.33□□□□□ -1.24
PCDH9Q9HC56 SGCD-202ENST00000435422 9755 ntAPPRIS ALT1 TSL 1 (best) BASIC7.33□□□□□ -1.24
PCDH9Q9HC56 PRNCR1-201ENST00000635449 12727 ntBASIC7.33□□□□□ -1.24
PCDH9Q9HC56 HERC2-201ENST00000261609 15337 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
PCDH9Q9HC56 PGRMC2-202ENST00000394276 2858 ntTSL 2 BASIC7.33□□□□□ -1.24
PCDH9Q9HC56 ADGRA3-209ENST00000508133 1572 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
PCDH9Q9HC56 RPS29-202ENST00000396020 7062 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
PCDH9Q9HC56 AL390726.6-202ENST00000635962 1365 ntTSL 5 BASIC7.33□□□□□ -1.24
PCDH9Q9HC56 HSD17B13-201ENST00000302219 2269 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
PCDH9Q9HC56 NBPF11-202ENST00000614015 4630 ntAPPRIS P2 TSL 2 BASIC7.32□□□□□ -1.24
PCDH9Q9HC56 REST-201ENST00000309042 7300 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
PCDH9Q9HC56 DTNA-226ENST00000596745 1508 ntTSL 2 BASIC7.32□□□□□ -1.24
PCDH9Q9HC56 CACNA2D3-212ENST00000620722 3296 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
PCDH9Q9HC56 STN1-202ENST00000369764 1311 ntAPPRIS P1 TSL 2 BASIC7.32□□□□□ -1.24
PCDH9Q9HC56 SLC39A12-202ENST00000377371 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC7.32□□□□□ -1.24
PCDH9Q9HC56 ECT2-201ENST00000232458 4087 ntAPPRIS P2 TSL 1 (best) BASIC7.32□□□□□ -1.24
PCDH9Q9HC56 OR7G2-202ENST00000641081 3015 ntAPPRIS ALT2 BASIC7.32□□□□□ -1.24
Retrieved 100 of 98,524 protein–RNA pairs in 114.7 ms