Protein–RNA interactions for Protein: Q96SN8

CDK5RAP2, CDK5 regulatory subunit-associated protein 2, humanhuman

Predictions only

Length 1,893 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP2Q96SN8 BROX-209ENST00000612948 4028 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
CDK5RAP2Q96SN8 ICA1L-202ENST00000392237 5173 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
CDK5RAP2Q96SN8 ADGRE1-203ENST00000381404 3056 ntTSL 2 BASIC8.17□□□□□ -1.1
CDK5RAP2Q96SN8 PLEKHA5-216ENST00000540972 1954 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
CDK5RAP2Q96SN8 OXCT1-204ENST00000509987 1441 ntTSL 2 BASIC8.17□□□□□ -1.1
CDK5RAP2Q96SN8 USP13-203ENST00000496897 2747 ntTSL 2 BASIC8.16□□□□□ -1.1
CDK5RAP2Q96SN8 POLR3A-201ENST00000372371 6640 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
CDK5RAP2Q96SN8 FDFT1-222ENST00000538689 2289 ntTSL 2 BASIC8.16□□□□□ -1.1
CDK5RAP2Q96SN8 LINC01505-203ENST00000435485 1686 ntTSL 5 BASIC8.16□□□□□ -1.1
CDK5RAP2Q96SN8 TCP11X2-202ENST00000453326 1747 ntAPPRIS P1 TSL 2 BASIC8.16□□□□□ -1.1
CDK5RAP2Q96SN8 TCP11X1-201ENST00000597070 1747 ntTSL 2 BASIC8.16□□□□□ -1.1
CDK5RAP2Q96SN8 CLCN3-202ENST00000360642 3208 ntTSL 2 BASIC8.16□□□□□ -1.1
CDK5RAP2Q96SN8 MAP3K20-AS1-203ENST00000423106 2538 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
CDK5RAP2Q96SN8 ARHGAP5-210ENST00000556611 4824 ntAPPRIS ALT1 TSL 5 BASIC8.16□□□□□ -1.1
CDK5RAP2Q96SN8 RTN3-202ENST00000339997 4886 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
CDK5RAP2Q96SN8 PPP3R2-201ENST00000374806 3387 ntAPPRIS P1 BASIC8.16□□□□□ -1.1
CDK5RAP2Q96SN8 GPR63-201ENST00000229955 5952 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
CDK5RAP2Q96SN8 MAPK10-357ENST00000641831 2858 ntBASIC8.16□□□□□ -1.1
CDK5RAP2Q96SN8 AL773545.3-201ENST00000414297 706 ntBASIC8.16□□□□□ -1.1
CDK5RAP2Q96SN8 AC236972.4-201ENST00000458091 963 ntBASIC8.16□□□□□ -1.1
CDK5RAP2Q96SN8 AC068647.2-202ENST00000485020 390 ntTSL 3 BASIC8.16□□□□□ -1.1
CDK5RAP2Q96SN8 AL117692.1-201ENST00000494283 713 ntBASIC8.16□□□□□ -1.1
CDK5RAP2Q96SN8 SSX8-201ENST00000506270 579 ntBASIC8.16□□□□□ -1.1
CDK5RAP2Q96SN8 RN7SKP196-201ENST00000516267 345 ntBASIC8.16□□□□□ -1.1
CDK5RAP2Q96SN8 OR4A21P-201ENST00000532759 944 ntBASIC8.16□□□□□ -1.1
CDK5RAP2Q96SN8 AC084880.3-201ENST00000535921 541 ntTSL 4 BASIC8.16□□□□□ -1.1
CDK5RAP2Q96SN8 HNRNPA1P74-201ENST00000560782 835 ntBASIC8.16□□□□□ -1.1
CDK5RAP2Q96SN8 AC005180.2-201ENST00000585620 562 ntTSL 3 BASIC8.16□□□□□ -1.1
CDK5RAP2Q96SN8 AC011921.2-201ENST00000589465 152 ntBASIC8.16□□□□□ -1.1
CDK5RAP2Q96SN8 WDR44-202ENST00000371822 3877 ntTSL 2 BASIC8.16□□□□□ -1.1
CDK5RAP2Q96SN8 GPM6B-205ENST00000454189 3957 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
CDK5RAP2Q96SN8 AC010132.4-201ENST00000569883 1368 ntBASIC8.16□□□□□ -1.1
CDK5RAP2Q96SN8 CAP1P2-201ENST00000417455 1409 ntBASIC8.16□□□□□ -1.1
CDK5RAP2Q96SN8 AP2B1-217ENST00000618940 3415 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
CDK5RAP2Q96SN8 AC092701.1-201ENST00000623627 1551 ntBASIC8.16□□□□□ -1.1
CDK5RAP2Q96SN8 RNASE9-209ENST00000557068 2703 ntAPPRIS P3 TSL 2 BASIC8.16□□□□□ -1.1
CDK5RAP2Q96SN8 ADI1-202ENST00000382093 3870 ntTSL 2 BASIC8.16□□□□□ -1.1
CDK5RAP2Q96SN8 SGO1-AS1-205ENST00000634837 1677 ntTSL 5 BASIC8.16□□□□□ -1.1
CDK5RAP2Q96SN8 ADH6-203ENST00000394899 2802 ntAPPRIS ALT1 TSL 2 BASIC8.16□□□□□ -1.1
CDK5RAP2Q96SN8 NAT10-201ENST00000257829 4002 ntAPPRIS P3 TSL 1 (best) BASIC8.16□□□□□ -1.1
CDK5RAP2Q96SN8 CBFA2T2-204ENST00000359606 7274 ntTSL 2 BASIC8.16□□□□□ -1.1
CDK5RAP2Q96SN8 SLC8A1-204ENST00000405269 2965 ntTSL 5 BASIC8.15□□□□□ -1.1
CDK5RAP2Q96SN8 IFT80-225ENST00000496589 3073 ntTSL 2 BASIC8.15□□□□□ -1.1
CDK5RAP2Q96SN8 POLH-201ENST00000372226 3322 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
CDK5RAP2Q96SN8 TAAR2-202ENST00000367931 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC8.15□□□□□ -1.1
CDK5RAP2Q96SN8 FCGR1B-202ENST00000369383 570 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
CDK5RAP2Q96SN8 TINAG-203ENST00000370869 782 ntTSL 3 BASIC8.15□□□□□ -1.1
CDK5RAP2Q96SN8 AL359715.1-201ENST00000404330 555 ntBASIC8.15□□□□□ -1.1
CDK5RAP2Q96SN8 RNA5SP198-201ENST00000410376 127 ntBASIC8.15□□□□□ -1.1
CDK5RAP2Q96SN8 AL022100.2-201ENST00000422548 389 ntTSL 3 BASIC8.15□□□□□ -1.1
CDK5RAP2Q96SN8 CYP3A5-203ENST00000439761 1075 ntTSL 2 BASIC8.15□□□□□ -1.1
CDK5RAP2Q96SN8 RPL23AP28-201ENST00000448062 470 ntBASIC8.15□□□□□ -1.1
CDK5RAP2Q96SN8 RN7SL492P-201ENST00000460700 295 ntBASIC8.15□□□□□ -1.1
CDK5RAP2Q96SN8 AC114324.2-202ENST00000503812 134 ntBASIC8.15□□□□□ -1.1
CDK5RAP2Q96SN8 ZCCHC10-203ENST00000504170 325 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
CDK5RAP2Q96SN8 AC004063.1-201ENST00000508358 547 ntTSL 4 BASIC8.15□□□□□ -1.1
CDK5RAP2Q96SN8 AC093664.1-201ENST00000511779 289 ntBASIC8.15□□□□□ -1.1
CDK5RAP2Q96SN8 TMEM116-208ENST00000549537 1229 ntAPPRIS ALT2 TSL 2 BASIC8.15□□□□□ -1.1
CDK5RAP2Q96SN8 AC010327.2-201ENST00000587647 488 ntBASIC8.15□□□□□ -1.1
CDK5RAP2Q96SN8 AL136084.2-214ENST00000587726 716 ntTSL 5 BASIC8.15□□□□□ -1.1
CDK5RAP2Q96SN8 RMDN2-AS1-203ENST00000601029 613 ntTSL 5 BASIC8.15□□□□□ -1.1
CDK5RAP2Q96SN8 MALAT1-212ENST00000618132 725 ntTSL 2 BASIC8.15□□□□□ -1.1
CDK5RAP2Q96SN8 Six3os1_1.1-201ENST00000620900 87 ntBASIC8.15□□□□□ -1.1
CDK5RAP2Q96SN8 METTL7A-203ENST00000548553 4076 ntAPPRIS P1 TSL 5 BASIC8.15□□□□□ -1.1
CDK5RAP2Q96SN8 PDIK1L-202ENST00000374271 4279 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
CDK5RAP2Q96SN8 TRIM75P-201ENST00000503032 1407 ntAPPRIS P1 BASIC8.15□□□□□ -1.1
CDK5RAP2Q96SN8 CYBRD1-203ENST00000409484 1493 ntTSL 2 BASIC8.15□□□□□ -1.1
CDK5RAP2Q96SN8 AQP4-205ENST00000581374 1586 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
CDK5RAP2Q96SN8 AC129502.1-201ENST00000623261 1654 ntBASIC8.15□□□□□ -1.1
CDK5RAP2Q96SN8 AL035555.1-201ENST00000404462 1790 ntBASIC8.15□□□□□ -1.1
CDK5RAP2Q96SN8 CA10-204ENST00000570565 2276 ntTSL 5 BASIC8.15□□□□□ -1.1
CDK5RAP2Q96SN8 ATAD1-202ENST00000328142 2939 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
CDK5RAP2Q96SN8 CRYBG3-201ENST00000389622 10729 ntAPPRIS P1 TSL 5 BASIC8.15□□□□□ -1.1
CDK5RAP2Q96SN8 ADAMTS3-204ENST00000622135 4479 ntAPPRIS P1 TSL 2 BASIC8.15□□□□□ -1.1
CDK5RAP2Q96SN8 OR9I1-203ENST00000641478 3027 ntAPPRIS P1 BASIC8.15□□□□□ -1.11
CDK5RAP2Q96SN8 ACKR2-202ENST00000442925 2879 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.11
CDK5RAP2Q96SN8 MAP2-203ENST00000361559 2038 ntTSL 1 (best) BASIC8.15□□□□□ -1.11
CDK5RAP2Q96SN8 ZFP2-202ENST00000520301 2043 ntAPPRIS P1 TSL 5 BASIC8.15□□□□□ -1.11
CDK5RAP2Q96SN8 LINC00598-215ENST00000638084 1974 ntTSL 5 BASIC8.15□□□□□ -1.11
CDK5RAP2Q96SN8 PAIP1-202ENST00000338972 1814 ntAPPRIS P3 TSL 5 BASIC8.15□□□□□ -1.11
CDK5RAP2Q96SN8 ZNF806-201ENST00000438300 1774 ntBASIC8.15□□□□□ -1.11
CDK5RAP2Q96SN8 TANC2-201ENST00000389520 6404 ntTSL 5 BASIC8.15□□□□□ -1.11
CDK5RAP2Q96SN8 SNORA64.3-201ENST00000365647 134 ntBASIC8.15□□□□□ -1.11
CDK5RAP2Q96SN8 AF274855.1-201ENST00000411474 850 ntTSL 3 BASIC8.15□□□□□ -1.11
CDK5RAP2Q96SN8 RPL7AP51-201ENST00000422016 760 ntBASIC8.15□□□□□ -1.11
CDK5RAP2Q96SN8 AL121759.1-202ENST00000425746 387 ntTSL 3 BASIC8.15□□□□□ -1.11
CDK5RAP2Q96SN8 AC211433.1-202ENST00000434256 1187 ntTSL 1 (best) BASIC8.15□□□□□ -1.11
CDK5RAP2Q96SN8 LINC01638-202ENST00000444114 637 ntTSL 2 BASIC8.15□□□□□ -1.11
CDK5RAP2Q96SN8 HBG2-204ENST00000444587 307 ntTSL 2 BASIC8.15□□□□□ -1.11
CDK5RAP2Q96SN8 ANAPC10-213ENST00000512680 505 ntTSL 3 BASIC8.15□□□□□ -1.11
CDK5RAP2Q96SN8 IGLVVII-41-1-201ENST00000518405 151 ntBASIC8.15□□□□□ -1.11
CDK5RAP2Q96SN8 OR9G2P-201ENST00000533326 880 ntBASIC8.15□□□□□ -1.11
CDK5RAP2Q96SN8 C14orf119-202ENST00000554203 725 ntAPPRIS P1 TSL 2 BASIC8.15□□□□□ -1.11
CDK5RAP2Q96SN8 STRADA-207ENST00000578008 1153 ntTSL 5 BASIC8.15□□□□□ -1.11
CDK5RAP2Q96SN8 AC103808.6-201ENST00000578035 464 ntTSL 3 BASIC8.15□□□□□ -1.11
CDK5RAP2Q96SN8 AC244205.1-201ENST00000624935 705 ntTSL 2 BASIC8.15□□□□□ -1.11
CDK5RAP2Q96SN8 LIMCH1-202ENST00000381753 5705 ntTSL 1 (best) BASIC8.15□□□□□ -1.11
CDK5RAP2Q96SN8 CCR6-202ENST00000349984 2980 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.11
CDK5RAP2Q96SN8 AC074141.1-201ENST00000588129 2995 ntBASIC8.15□□□□□ -1.11
CDK5RAP2Q96SN8 CLSPN-201ENST00000251195 4769 ntTSL 1 (best) BASIC8.15□□□□□ -1.11
Retrieved 100 of 98,524 protein–RNA pairs in 81.5 ms