Protein–RNA interactions for Protein: P51956

NEK3, Serine/threonine-protein kinase Nek3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3P51956 AC012513.1-201ENST00000417481 784 ntTSL 2 BASIC7.57□□□□□ -1.2
NEK3P51956 AC127537.1-201ENST00000418183 748 ntBASIC7.57□□□□□ -1.2
NEK3P51956 AL773545.1-201ENST00000425632 347 ntTSL 5 BASIC7.57□□□□□ -1.2
NEK3P51956 NQO1-204ENST00000439109 924 ntTSL 2 BASIC7.57□□□□□ -1.2
NEK3P51956 AC106869.1-202ENST00000441997 604 ntTSL 4 BASIC7.57□□□□□ -1.2
NEK3P51956 RPL24P8-201ENST00000446071 474 ntBASIC7.57□□□□□ -1.2
NEK3P51956 AC011005.4-201ENST00000466717 535 ntTSL 3 BASIC7.57□□□□□ -1.2
NEK3P51956 RPL5P15-201ENST00000475870 897 ntBASIC7.57□□□□□ -1.2
NEK3P51956 CYB5A-204ENST00000494131 776 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
NEK3P51956 AC226119.1-201ENST00000514073 682 ntTSL 3 BASIC7.57□□□□□ -1.2
NEK3P51956 AC027541.1-201ENST00000519306 485 ntTSL 3 BASIC7.57□□□□□ -1.2
NEK3P51956 AC079015.1-201ENST00000521793 596 ntTSL 2 BASIC7.57□□□□□ -1.2
NEK3P51956 AC023078.5-201ENST00000528646 707 ntTSL 3 BASIC7.57□□□□□ -1.2
NEK3P51956 TCEANC-205ENST00000544987 1146 ntTSL 5 BASIC7.57□□□□□ -1.2
NEK3P51956 AC026462.4-201ENST00000565229 951 ntTSL 3 BASIC7.57□□□□□ -1.2
NEK3P51956 ZNF525-206ENST00000593918 590 ntTSL 5 BASIC7.57□□□□□ -1.2
NEK3P51956 AC020915.5-201ENST00000596836 964 ntBASIC7.57□□□□□ -1.2
NEK3P51956 VN1R81P-201ENST00000602085 372 ntBASIC7.57□□□□□ -1.2
NEK3P51956 AL589743.4-201ENST00000610763 586 ntTSL 5 BASIC7.57□□□□□ -1.2
NEK3P51956 AC243830.2-201ENST00000618067 630 ntBASIC7.57□□□□□ -1.2
NEK3P51956 AP001043.1-201ENST00000626259 773 ntTSL 5 BASIC7.57□□□□□ -1.2
NEK3P51956 AL391380.1-201ENST00000439300 1432 ntBASIC7.57□□□□□ -1.2
NEK3P51956 GABRA2-205ENST00000507069 1562 ntTSL 3 BASIC7.57□□□□□ -1.2
NEK3P51956 BVES-AS1-202ENST00000369122 1716 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
NEK3P51956 FREM2-201ENST00000280481 16070 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
NEK3P51956 LINC00616-205ENST00000514600 2017 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
NEK3P51956 BRDT-202ENST00000362005 3409 ntAPPRIS P3 TSL 1 (best) BASIC7.57□□□□□ -1.2
NEK3P51956 DLG2-203ENST00000376104 5139 ntAPPRIS P3 TSL 1 (best) BASIC7.57□□□□□ -1.2
NEK3P51956 DCLRE1C-211ENST00000396817 2761 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
NEK3P51956 AC107980.1-201ENST00000558671 3355 ntBASIC7.57□□□□□ -1.2
NEK3P51956 AL157713.1-201ENST00000379752 1531 ntBASIC7.57□□□□□ -1.2
NEK3P51956 LINC02547-201ENST00000531559 3308 ntTSL 2 BASIC7.57□□□□□ -1.2
NEK3P51956 SPATA31C2-201ENST00000324915 3777 ntBASIC7.57□□□□□ -1.2
NEK3P51956 LRRC37A3-202ENST00000334962 2654 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
NEK3P51956 CAST-202ENST00000325674 3356 ntTSL 5 BASIC7.56□□□□□ -1.2
NEK3P51956 PDGFC-203ENST00000502773 4165 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
NEK3P51956 AC242022.1-201ENST00000638002 1565 ntTSL 5 BASIC7.56□□□□□ -1.2
NEK3P51956 FYB1-210ENST00000515010 2578 ntAPPRIS P3 TSL 1 (best) BASIC7.56□□□□□ -1.2
NEK3P51956 SFR1-201ENST00000369727 1438 ntAPPRIS P4 TSL 2 BASIC7.56□□□□□ -1.2
NEK3P51956 PWRN1-212ENST00000569908 1435 ntBASIC7.56□□□□□ -1.2
NEK3P51956 ADK-201ENST00000286621 1169 ntAPPRIS P4 TSL 1 (best) BASIC7.56□□□□□ -1.2
NEK3P51956 OR4F15-201ENST00000332238 2119 ntAPPRIS P1 BASIC7.56□□□□□ -1.2
NEK3P51956 SNORA73B-201ENST00000363217 204 ntBASIC7.56□□□□□ -1.2
NEK3P51956 MXI1-204ENST00000369612 879 ntTSL 3 BASIC7.56□□□□□ -1.2
NEK3P51956 CFAP61-203ENST00000377293 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC7.56□□□□□ -1.2
NEK3P51956 GRXCR1-201ENST00000399770 991 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
NEK3P51956 AC244452.1-201ENST00000413798 141 ntBASIC7.56□□□□□ -1.2
NEK3P51956 LINC01614-201ENST00000415479 648 ntTSL 2 BASIC7.56□□□□□ -1.2
NEK3P51956 OR4A8-201ENST00000418689 945 ntAPPRIS P1 BASIC7.56□□□□□ -1.2
NEK3P51956 TAS2R2P-201ENST00000421146 910 ntBASIC7.56□□□□□ -1.2
NEK3P51956 RPSAP1-201ENST00000421328 880 ntBASIC7.56□□□□□ -1.2
NEK3P51956 AL450384.2-202ENST00000436485 656 ntTSL 3 BASIC7.56□□□□□ -1.2
NEK3P51956 GTF2F2P2-201ENST00000445825 721 ntBASIC7.56□□□□□ -1.2
NEK3P51956 NPPA-AS1-202ENST00000446542 1032 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
NEK3P51956 GRIK1-AS1-205ENST00000455392 767 ntTSL 3 BASIC7.56□□□□□ -1.2
NEK3P51956 AL050331.2-201ENST00000457319 421 ntTSL 3 BASIC7.56□□□□□ -1.2
NEK3P51956 SEPT7P6-201ENST00000469999 1143 ntBASIC7.56□□□□□ -1.2
NEK3P51956 RPL41-202ENST00000501597 469 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
NEK3P51956 AC110760.2-202ENST00000507517 946 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
NEK3P51956 AC019133.1-201ENST00000508292 420 ntTSL 3 BASIC7.56□□□□□ -1.2
NEK3P51956 SNORA70.17-201ENST00000516449 133 ntBASIC7.56□□□□□ -1.2
NEK3P51956 SFTA3-210ENST00000521945 1116 ntTSL 2 BASIC7.56□□□□□ -1.2
NEK3P51956 CRYAB-205ENST00000526180 1017 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
NEK3P51956 HID1-AS1-201ENST00000577295 815 ntTSL 2 BASIC7.56□□□□□ -1.2
NEK3P51956 AC011447.3-202ENST00000593655 555 ntTSL 4 BASIC7.56□□□□□ -1.2
NEK3P51956 AC108451.2-201ENST00000603875 538 ntBASIC7.56□□□□□ -1.2
NEK3P51956 AC117490.2-201ENST00000610042 594 ntBASIC7.56□□□□□ -1.2
NEK3P51956 CT45A7-201ENST00000610598 996 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
NEK3P51956 Metazoa_SRP.55-201ENST00000618452 275 ntBASIC7.56□□□□□ -1.2
NEK3P51956 AL513321.2-202ENST00000634479 921 ntTSL 5 BASIC7.56□□□□□ -1.2
NEK3P51956 ANK2-215ENST00000509550 3638 ntTSL 2 BASIC7.56□□□□□ -1.2
NEK3P51956 ZC3H8-202ENST00000409573 5965 ntAPPRIS P2 TSL 5 BASIC7.56□□□□□ -1.2
NEK3P51956 GCSAML-202ENST00000366489 4030 ntAPPRIS ALT2 TSL 2 BASIC7.56□□□□□ -1.2
NEK3P51956 RGPD3-201ENST00000304514 5510 ntAPPRIS ALT2 TSL 2 BASIC7.56□□□□□ -1.2
NEK3P51956 RAPGEF5-201ENST00000344041 6621 ntAPPRIS P1 TSL 5 BASIC7.56□□□□□ -1.2
NEK3P51956 TMC5-206ENST00000561503 2487 ntTSL 2 BASIC7.56□□□□□ -1.2
NEK3P51956 MTURN-202ENST00000324489 5605 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
NEK3P51956 LEKR1-204ENST00000470811 2881 ntTSL 2 BASIC7.56□□□□□ -1.2
NEK3P51956 LMO7-202ENST00000341547 7237 ntAPPRIS P3 TSL 1 (best) BASIC7.56□□□□□ -1.2
NEK3P51956 GREM1-203ENST00000622074 14606 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
NEK3P51956 AC244100.2-202ENST00000612584 3878 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
NEK3P51956 ATM-215ENST00000530958 5718 ntTSL 2 BASIC7.55□□□□□ -1.2
NEK3P51956 REG1CP-201ENST00000377435 1705 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
NEK3P51956 RBM23-203ENST00000359890 10040 ntAPPRIS P4 TSL 1 (best) BASIC7.55□□□□□ -1.2
NEK3P51956 ATOX1-203ENST00000521264 4341 ntTSL 2 BASIC7.55□□□□□ -1.2
NEK3P51956 DST-220ENST00000518935 3547 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
NEK3P51956 CENPN-205ENST00000439957 1699 ntTSL 2 BASIC7.55□□□□□ -1.2
NEK3P51956 G3BP2-203ENST00000395719 4217 ntAPPRIS P4 TSL 1 (best) BASIC7.55□□□□□ -1.2
NEK3P51956 ZNF106-201ENST00000263805 10460 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
NEK3P51956 OR2M7-201ENST00000317965 939 ntAPPRIS P1 BASIC7.55□□□□□ -1.2
NEK3P51956 RN7SKP63-201ENST00000363187 301 ntBASIC7.55□□□□□ -1.2
NEK3P51956 RGS8-202ENST00000367556 843 ntAPPRIS P1 TSL 5 BASIC7.55□□□□□ -1.2
NEK3P51956 NCR2-201ENST00000373083 1154 ntAPPRIS ALT2 TSL 1 (best) BASIC7.55□□□□□ -1.2
NEK3P51956 NDUFV2-202ENST00000400033 942 ntTSL 3 BASIC7.55□□□□□ -1.2
NEK3P51956 RN7SKP131-201ENST00000410698 301 ntBASIC7.55□□□□□ -1.2
NEK3P51956 AC020983.1-201ENST00000417063 543 ntBASIC7.55□□□□□ -1.2
NEK3P51956 AL603840.1-203ENST00000424357 645 ntTSL 3 BASIC7.55□□□□□ -1.2
NEK3P51956 VDAC2P3-201ENST00000430995 828 ntBASIC7.55□□□□□ -1.2
NEK3P51956 AP001628.1-201ENST00000431150 285 ntTSL 5 BASIC7.55□□□□□ -1.2
NEK3P51956 AC073072.2-201ENST00000447425 348 ntBASIC7.55□□□□□ -1.2
Retrieved 100 of 98,524 protein–RNA pairs in 82.7 ms