Protein–RNA interactions for Protein: P24928

POLR2A, DNA-directed RNA polymerase II subunit RPB1, humanhuman

Known RBP Predictions only

Length 1,970 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2AP24928 MTIF3-203ENST00000405591 889 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
POLR2AP24928 AL157938.2-207ENST00000415391 884 ntTSL 2 BASIC8.14□□□□□ -1.11
POLR2AP24928 OR4A8-201ENST00000418689 945 ntAPPRIS P1 BASIC8.14□□□□□ -1.11
POLR2AP24928 BX510359.3-201ENST00000422168 306 ntBASIC8.14□□□□□ -1.11
POLR2AP24928 AL512363.1-201ENST00000425089 586 ntTSL 2 BASIC8.14□□□□□ -1.11
POLR2AP24928 HTR3E-AS1-201ENST00000431427 515 ntTSL 4 BASIC8.14□□□□□ -1.11
POLR2AP24928 AC069154.1-201ENST00000432914 542 ntBASIC8.14□□□□□ -1.11
POLR2AP24928 OR2AF1P-201ENST00000454899 889 ntBASIC8.14□□□□□ -1.11
POLR2AP24928 SETP20-201ENST00000457046 852 ntBASIC8.14□□□□□ -1.11
POLR2AP24928 AC096743.1-201ENST00000485172 319 ntBASIC8.14□□□□□ -1.11
POLR2AP24928 AC103718.1-201ENST00000522667 683 ntTSL 3 BASIC8.14□□□□□ -1.11
POLR2AP24928 OLR1-209ENST00000543993 822 ntTSL 2 BASIC8.14□□□□□ -1.11
POLR2AP24928 AC090227.1-201ENST00000590532 936 ntAPPRIS P1 TSL 5 BASIC8.14□□□□□ -1.11
POLR2AP24928 AC245052.7-201ENST00000601161 359 ntBASIC8.14□□□□□ -1.11
POLR2AP24928 AC026790.2-201ENST00000606282 430 ntBASIC8.14□□□□□ -1.11
POLR2AP24928 LINC01105-203ENST00000431188 3329 ntTSL 5 BASIC8.14□□□□□ -1.11
POLR2AP24928 AC145138.1-201ENST00000512908 2851 ntBASIC8.14□□□□□ -1.11
POLR2AP24928 DOCK8-209ENST00000469391 6386 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
POLR2AP24928 FKBP5-202ENST00000536438 3940 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
POLR2AP24928 NEK5-201ENST00000355568 2918 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
POLR2AP24928 PLCXD2-205ENST00000636933 7710 ntAPPRIS P1 TSL 5 BASIC8.14□□□□□ -1.11
POLR2AP24928 NEK1-207ENST00000511633 5536 ntAPPRIS ALT2 TSL 1 (best) BASIC8.14□□□□□ -1.11
POLR2AP24928 LINC02203-204ENST00000628444 2323 ntTSL 2 BASIC8.14□□□□□ -1.11
POLR2AP24928 SMAD9-203ENST00000399275 5389 ntAPPRIS ALT1 TSL 1 (best) BASIC8.13□□□□□ -1.11
POLR2AP24928 GCNT1P4-201ENST00000404096 329 ntBASIC8.13□□□□□ -1.11
POLR2AP24928 AC092865.3-201ENST00000425390 1026 ntBASIC8.13□□□□□ -1.11
POLR2AP24928 AL020997.1-201ENST00000446554 349 ntBASIC8.13□□□□□ -1.11
POLR2AP24928 PFN2-209ENST00000481275 560 ntTSL 4 BASIC8.13□□□□□ -1.11
POLR2AP24928 AC098859.2-201ENST00000506232 563 ntTSL 4 BASIC8.13□□□□□ -1.11
POLR2AP24928 AC253576.1-201ENST00000511645 1156 ntBASIC8.13□□□□□ -1.11
POLR2AP24928 AC016405.1-202ENST00000524348 758 ntTSL 3 BASIC8.13□□□□□ -1.11
POLR2AP24928 AC124891.1-201ENST00000536322 519 ntBASIC8.13□□□□□ -1.11
POLR2AP24928 AC027288.1-201ENST00000548359 816 ntTSL 3 BASIC8.13□□□□□ -1.11
POLR2AP24928 RN7SL199P-201ENST00000578752 281 ntBASIC8.13□□□□□ -1.11
POLR2AP24928 RN7SL656P-201ENST00000579044 281 ntBASIC8.13□□□□□ -1.11
POLR2AP24928 RN7SL270P-201ENST00000579643 281 ntBASIC8.13□□□□□ -1.11
POLR2AP24928 SUPT4H1-207ENST00000581540 668 ntTSL 2 BASIC8.13□□□□□ -1.11
POLR2AP24928 Metazoa_SRP.202-201ENST00000585071 281 ntBASIC8.13□□□□□ -1.11
POLR2AP24928 AC011468.2-202ENST00000594362 579 ntTSL 5 BASIC8.13□□□□□ -1.11
POLR2AP24928 ZNF682-208ENST00000596019 552 ntTSL 5 BASIC8.13□□□□□ -1.11
POLR2AP24928 AC008555.7-201ENST00000605008 583 ntBASIC8.13□□□□□ -1.11
POLR2AP24928 PRSS3P3-201ENST00000612253 692 ntTSL 5 BASIC8.13□□□□□ -1.11
POLR2AP24928 AL512356.3-201ENST00000623005 461 ntBASIC8.13□□□□□ -1.11
POLR2AP24928 ZNF844-202ENST00000441304 2036 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
POLR2AP24928 PDE6A-204ENST00000613228 5398 ntTSL 5 BASIC8.13□□□□□ -1.11
POLR2AP24928 LINC02209-201ENST00000521245 2651 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
POLR2AP24928 MARF1-201ENST00000396368 7743 ntAPPRIS P3 TSL 1 (best) BASIC8.13□□□□□ -1.11
POLR2AP24928 ERICH3-202ENST00000420661 2068 ntAPPRIS ALT2 TSL 1 (best) BASIC8.13□□□□□ -1.11
POLR2AP24928 ANKRD20A11P-206ENST00000451663 3717 ntBASIC8.13□□□□□ -1.11
POLR2AP24928 LRP6-206ENST00000543091 4774 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
POLR2AP24928 TCL6-201ENST00000352367 3398 ntTSL 2 BASIC8.13□□□□□ -1.11
POLR2AP24928 BBOX1-204ENST00000528583 1724 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
POLR2AP24928 GTF2IP12-202ENST00000634317 5052 ntTSL 5 BASIC8.13□□□□□ -1.11
POLR2AP24928 CASP10-208ENST00000448480 1603 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
POLR2AP24928 OR4K17-202ENST00000641386 4886 ntAPPRIS P1 BASIC8.13□□□□□ -1.11
POLR2AP24928 SLFN13-211ENST00000542635 5921 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
POLR2AP24928 DCP2-208ENST00000515408 8029 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
POLR2AP24928 WBP1L-201ENST00000369889 4107 ntAPPRIS P3 TSL 1 (best) BASIC8.13□□□□□ -1.11
POLR2AP24928 ASCC1-201ENST00000317126 1501 ntAPPRIS P1 TSL 2 BASIC8.13□□□□□ -1.11
POLR2AP24928 DEFA6-201ENST00000297436 469 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
POLR2AP24928 MRPS6P2-201ENST00000381143 370 ntBASIC8.13□□□□□ -1.11
POLR2AP24928 IGLV3-10-201ENST00000390315 382 ntAPPRIS P1 BASIC8.13□□□□□ -1.11
POLR2AP24928 SMARCE1P6-201ENST00000398372 1216 ntBASIC8.13□□□□□ -1.11
POLR2AP24928 RBBP4P5-201ENST00000398583 1266 ntBASIC8.13□□□□□ -1.11
POLR2AP24928 AC073987.1-201ENST00000422683 638 ntTSL 3 BASIC8.13□□□□□ -1.11
POLR2AP24928 AL354707.3-201ENST00000427308 331 ntBASIC8.13□□□□□ -1.11
POLR2AP24928 AC026391.1-201ENST00000450677 537 ntTSL 3 BASIC8.13□□□□□ -1.11
POLR2AP24928 AC023794.2-201ENST00000504891 528 ntTSL 3 BASIC8.13□□□□□ -1.11
POLR2AP24928 AC105919.1-201ENST00000507203 393 ntTSL 3 BASIC8.13□□□□□ -1.11
POLR2AP24928 AC010181.1-202ENST00000509191 798 ntTSL 3 BASIC8.13□□□□□ -1.11
POLR2AP24928 AC026774.2-201ENST00000513990 1098 ntBASIC8.13□□□□□ -1.11
POLR2AP24928 LINC01618-201ENST00000514957 727 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
POLR2AP24928 TCEANC-205ENST00000544987 1146 ntTSL 5 BASIC8.13□□□□□ -1.11
POLR2AP24928 AC006581.1-201ENST00000545706 496 ntTSL 3 BASIC8.13□□□□□ -1.11
POLR2AP24928 SLC7A7-210ENST00000554517 1158 ntTSL 5 BASIC8.13□□□□□ -1.11
POLR2AP24928 AL845552.1-201ENST00000556820 323 ntBASIC8.13□□□□□ -1.11
POLR2AP24928 RORA-AS2-202ENST00000561413 576 ntTSL 4 BASIC8.13□□□□□ -1.11
POLR2AP24928 AC092123.1-202ENST00000565310 405 ntTSL 3 BASIC8.13□□□□□ -1.11
POLR2AP24928 AC011468.3-201ENST00000597886 332 ntTSL 3 BASIC8.13□□□□□ -1.11
POLR2AP24928 AC079315.1-201ENST00000602952 623 ntBASIC8.13□□□□□ -1.11
POLR2AP24928 AL035410.2-201ENST00000604963 864 ntBASIC8.13□□□□□ -1.11
POLR2AP24928 uc_338.31-201ENST00000615595 186 ntBASIC8.13□□□□□ -1.11
POLR2AP24928 PPP3CB-AS1-215ENST00000620559 656 ntTSL 5 BASIC8.13□□□□□ -1.11
POLR2AP24928 TEX41-255ENST00000626404 610 ntTSL 5 BASIC8.13□□□□□ -1.11
POLR2AP24928 BCAT1-202ENST00000342945 4319 ntTSL 2 BASIC8.13□□□□□ -1.11
POLR2AP24928 AL512662.1-201ENST00000624850 2251 ntBASIC8.13□□□□□ -1.11
POLR2AP24928 USP16-201ENST00000334352 3004 ntAPPRIS P3 TSL 5 BASIC8.12□□□□□ -1.11
POLR2AP24928 UEVLD-205ENST00000396197 4156 ntAPPRIS P1 TSL 5 BASIC8.12□□□□□ -1.11
POLR2AP24928 PCSK1-201ENST00000311106 5086 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
POLR2AP24928 ANAPC10-201ENST00000309439 868 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
POLR2AP24928 C1orf194-203ENST00000369948 663 ntAPPRIS P1 TSL 2 BASIC8.12□□□□□ -1.11
POLR2AP24928 SPTAN1-202ENST00000372731 7889 ntAPPRIS P3 TSL 1 (best) BASIC8.12□□□□□ -1.11
POLR2AP24928 IGKV3-7-201ENST00000390247 445 ntAPPRIS P1 BASIC8.12□□□□□ -1.11
POLR2AP24928 SNORA77.2-201ENST00000408571 112 ntBASIC8.12□□□□□ -1.11
POLR2AP24928 AL050344.1-201ENST00000424084 490 ntTSL 3 BASIC8.12□□□□□ -1.11
POLR2AP24928 VN1R20P-201ENST00000425215 966 ntBASIC8.12□□□□□ -1.11
POLR2AP24928 RN7SL654P-201ENST00000479178 292 ntBASIC8.12□□□□□ -1.11
POLR2AP24928 AC100863.1-201ENST00000584843 560 ntTSL 4 BASIC8.12□□□□□ -1.11
POLR2AP24928 AC006305.2-201ENST00000589617 552 ntTSL 4 BASIC8.12□□□□□ -1.11
POLR2AP24928 AC025162.2-201ENST00000619602 560 ntBASIC8.12□□□□□ -1.11
Retrieved 100 of 98,524 protein–RNA pairs in 100.1 ms