Protein–RNA interactions for Protein: Q9P218

COL20A1, Collagen alpha-1(XX) chain, humanhuman

Predictions only

Length 1,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1Q9P218 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC22.69■■□□□ 1.22
COL20A1Q9P218 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC22.69■■□□□ 1.22
COL20A1Q9P218 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
COL20A1Q9P218 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC22.68■■□□□ 1.22
COL20A1Q9P218 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
COL20A1Q9P218 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
COL20A1Q9P218 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC22.68■■□□□ 1.22
COL20A1Q9P218 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC22.68■■□□□ 1.22
COL20A1Q9P218 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC22.68■■□□□ 1.22
COL20A1Q9P218 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC22.68■■□□□ 1.22
COL20A1Q9P218 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
COL20A1Q9P218 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
COL20A1Q9P218 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC22.68■■□□□ 1.22
COL20A1Q9P218 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
COL20A1Q9P218 KRT16P5-201ENST00000455284 522 ntBASIC22.68■■□□□ 1.22
COL20A1Q9P218 TSPY15P-201ENST00000457163 923 ntBASIC22.68■■□□□ 1.22
COL20A1Q9P218 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC22.68■■□□□ 1.22
COL20A1Q9P218 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC22.68■■□□□ 1.22
COL20A1Q9P218 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
COL20A1Q9P218 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
COL20A1Q9P218 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
COL20A1Q9P218 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC22.67■■□□□ 1.22
COL20A1Q9P218 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
COL20A1Q9P218 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
COL20A1Q9P218 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC22.67■■□□□ 1.22
COL20A1Q9P218 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC22.67■■□□□ 1.22
COL20A1Q9P218 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC22.67■■□□□ 1.22
COL20A1Q9P218 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
COL20A1Q9P218 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
COL20A1Q9P218 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
COL20A1Q9P218 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC22.67■■□□□ 1.22
COL20A1Q9P218 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
COL20A1Q9P218 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC22.67■■□□□ 1.22
COL20A1Q9P218 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC22.67■■□□□ 1.22
COL20A1Q9P218 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC22.67■■□□□ 1.22
COL20A1Q9P218 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC22.67■■□□□ 1.22
COL20A1Q9P218 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC22.67■■□□□ 1.22
COL20A1Q9P218 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC22.67■■□□□ 1.22
COL20A1Q9P218 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
COL20A1Q9P218 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
COL20A1Q9P218 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
COL20A1Q9P218 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC22.67■■□□□ 1.22
COL20A1Q9P218 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC22.67■■□□□ 1.22
COL20A1Q9P218 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC22.67■■□□□ 1.22
COL20A1Q9P218 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC22.66■■□□□ 1.22
COL20A1Q9P218 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
COL20A1Q9P218 AL135905.2-201ENST00000584934 1404 ntBASIC22.66■■□□□ 1.22
COL20A1Q9P218 HTR7P1-201ENST00000538670 1336 ntBASIC22.66■■□□□ 1.22
COL20A1Q9P218 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC22.66■■□□□ 1.22
COL20A1Q9P218 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
COL20A1Q9P218 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC22.66■■□□□ 1.22
COL20A1Q9P218 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC22.66■■□□□ 1.22
COL20A1Q9P218 CALM3-202ENST00000391918 702 ntTSL 2 BASIC22.66■■□□□ 1.22
COL20A1Q9P218 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
COL20A1Q9P218 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC22.66■■□□□ 1.22
COL20A1Q9P218 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC22.66■■□□□ 1.22
COL20A1Q9P218 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC22.66■■□□□ 1.22
COL20A1Q9P218 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC22.66■■□□□ 1.22
COL20A1Q9P218 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
COL20A1Q9P218 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
COL20A1Q9P218 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
COL20A1Q9P218 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC22.66■■□□□ 1.22
COL20A1Q9P218 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC22.65■■□□□ 1.22
COL20A1Q9P218 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC22.65■■□□□ 1.22
COL20A1Q9P218 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC22.65■■□□□ 1.22
COL20A1Q9P218 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC22.65■■□□□ 1.22
COL20A1Q9P218 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC22.65■■□□□ 1.22
COL20A1Q9P218 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC22.65■■□□□ 1.22
COL20A1Q9P218 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC22.65■■□□□ 1.22
COL20A1Q9P218 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC22.65■■□□□ 1.22
COL20A1Q9P218 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC22.65■■□□□ 1.22
COL20A1Q9P218 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC22.65■■□□□ 1.22
COL20A1Q9P218 PENK-204ENST00000518770 863 ntTSL 2 BASIC22.65■■□□□ 1.22
COL20A1Q9P218 AF186192.3-201ENST00000583427 947 ntBASIC22.65■■□□□ 1.22
COL20A1Q9P218 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC22.65■■□□□ 1.22
COL20A1Q9P218 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC22.65■■□□□ 1.22
COL20A1Q9P218 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC22.65■■□□□ 1.22
COL20A1Q9P218 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC22.65■■□□□ 1.22
COL20A1Q9P218 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC22.65■■□□□ 1.22
COL20A1Q9P218 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
COL20A1Q9P218 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
COL20A1Q9P218 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC22.64■■□□□ 1.22
COL20A1Q9P218 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC22.64■■□□□ 1.22
COL20A1Q9P218 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
COL20A1Q9P218 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
COL20A1Q9P218 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
COL20A1Q9P218 SAPCD2P4-201ENST00000424595 1171 ntBASIC22.64■■□□□ 1.21
COL20A1Q9P218 GRAP-204ENST00000573099 846 ntTSL 3 BASIC22.64■■□□□ 1.21
COL20A1Q9P218 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC22.64■■□□□ 1.21
COL20A1Q9P218 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC22.64■■□□□ 1.21
COL20A1Q9P218 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC22.64■■□□□ 1.21
COL20A1Q9P218 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
COL20A1Q9P218 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
COL20A1Q9P218 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
COL20A1Q9P218 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC22.64■■□□□ 1.21
COL20A1Q9P218 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
COL20A1Q9P218 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC22.64■■□□□ 1.21
COL20A1Q9P218 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
COL20A1Q9P218 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC22.63■■□□□ 1.21
COL20A1Q9P218 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms