Protein–RNA interactions for Protein: Q9NQS3

NECTIN3, Nectin-3, humanhuman

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN3Q9NQS3 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC19.11■□□□□ 0.65
NECTIN3Q9NQS3 AC087289.5-201ENST00000586076 3175 ntBASIC19.11■□□□□ 0.65
NECTIN3Q9NQS3 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
NECTIN3Q9NQS3 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
NECTIN3Q9NQS3 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC19.11■□□□□ 0.65
NECTIN3Q9NQS3 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
NECTIN3Q9NQS3 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
NECTIN3Q9NQS3 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
NECTIN3Q9NQS3 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
NECTIN3Q9NQS3 RHEB-204ENST00000472642 900 ntTSL 3 BASIC19.11■□□□□ 0.65
NECTIN3Q9NQS3 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC19.11■□□□□ 0.65
NECTIN3Q9NQS3 MYC-209ENST00000641252 345 ntBASIC19.11■□□□□ 0.65
NECTIN3Q9NQS3 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC19.11■□□□□ 0.65
NECTIN3Q9NQS3 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
NECTIN3Q9NQS3 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
NECTIN3Q9NQS3 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
NECTIN3Q9NQS3 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
NECTIN3Q9NQS3 ME2-216ENST00000639850 2331 ntTSL 5 BASIC19.11■□□□□ 0.65
NECTIN3Q9NQS3 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
NECTIN3Q9NQS3 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC19.1■□□□□ 0.65
NECTIN3Q9NQS3 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
NECTIN3Q9NQS3 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
NECTIN3Q9NQS3 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
NECTIN3Q9NQS3 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC19.1■□□□□ 0.65
NECTIN3Q9NQS3 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
NECTIN3Q9NQS3 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC19.1■□□□□ 0.65
NECTIN3Q9NQS3 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC19.1■□□□□ 0.65
NECTIN3Q9NQS3 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
NECTIN3Q9NQS3 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
NECTIN3Q9NQS3 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
NECTIN3Q9NQS3 FP700111.2-201ENST00000619190 1892 ntBASIC19.1■□□□□ 0.65
NECTIN3Q9NQS3 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
NECTIN3Q9NQS3 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
NECTIN3Q9NQS3 AC097658.1-201ENST00000475555 843 ntBASIC19.1■□□□□ 0.65
NECTIN3Q9NQS3 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC19.1■□□□□ 0.65
NECTIN3Q9NQS3 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC19.1■□□□□ 0.65
NECTIN3Q9NQS3 AC083880.1-201ENST00000608266 535 ntBASIC19.1■□□□□ 0.65
NECTIN3Q9NQS3 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
NECTIN3Q9NQS3 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
NECTIN3Q9NQS3 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC19.1■□□□□ 0.65
NECTIN3Q9NQS3 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
NECTIN3Q9NQS3 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
NECTIN3Q9NQS3 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
NECTIN3Q9NQS3 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
NECTIN3Q9NQS3 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
NECTIN3Q9NQS3 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
NECTIN3Q9NQS3 KRT8P36-201ENST00000489121 1440 ntBASIC19.09■□□□□ 0.65
NECTIN3Q9NQS3 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
NECTIN3Q9NQS3 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
NECTIN3Q9NQS3 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
NECTIN3Q9NQS3 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC19.09■□□□□ 0.65
NECTIN3Q9NQS3 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
NECTIN3Q9NQS3 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC19.09■□□□□ 0.65
NECTIN3Q9NQS3 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC19.09■□□□□ 0.65
NECTIN3Q9NQS3 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
NECTIN3Q9NQS3 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC19.09■□□□□ 0.65
NECTIN3Q9NQS3 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
NECTIN3Q9NQS3 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
NECTIN3Q9NQS3 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
NECTIN3Q9NQS3 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
NECTIN3Q9NQS3 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
NECTIN3Q9NQS3 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
NECTIN3Q9NQS3 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
NECTIN3Q9NQS3 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC19.08■□□□□ 0.65
NECTIN3Q9NQS3 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC19.08■□□□□ 0.65
NECTIN3Q9NQS3 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
NECTIN3Q9NQS3 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
NECTIN3Q9NQS3 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
NECTIN3Q9NQS3 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC19.08■□□□□ 0.65
NECTIN3Q9NQS3 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
NECTIN3Q9NQS3 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
NECTIN3Q9NQS3 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC19.08■□□□□ 0.64
NECTIN3Q9NQS3 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
NECTIN3Q9NQS3 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC19.08■□□□□ 0.64
NECTIN3Q9NQS3 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC19.08■□□□□ 0.64
NECTIN3Q9NQS3 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC19.08■□□□□ 0.64
NECTIN3Q9NQS3 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
NECTIN3Q9NQS3 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
NECTIN3Q9NQS3 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
NECTIN3Q9NQS3 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC19.08■□□□□ 0.64
NECTIN3Q9NQS3 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC19.08■□□□□ 0.64
NECTIN3Q9NQS3 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
NECTIN3Q9NQS3 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
NECTIN3Q9NQS3 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC19.08■□□□□ 0.64
NECTIN3Q9NQS3 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC19.08■□□□□ 0.64
NECTIN3Q9NQS3 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
NECTIN3Q9NQS3 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC19.07■□□□□ 0.64
NECTIN3Q9NQS3 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
NECTIN3Q9NQS3 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC19.07■□□□□ 0.64
NECTIN3Q9NQS3 AC007225.1-201ENST00000566331 1836 ntBASIC19.07■□□□□ 0.64
NECTIN3Q9NQS3 NXN-202ENST00000537628 1340 ntTSL 3 BASIC19.07■□□□□ 0.64
NECTIN3Q9NQS3 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC19.07■□□□□ 0.64
NECTIN3Q9NQS3 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
NECTIN3Q9NQS3 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC19.07■□□□□ 0.64
NECTIN3Q9NQS3 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC19.07■□□□□ 0.64
NECTIN3Q9NQS3 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
NECTIN3Q9NQS3 AC073314.1-201ENST00000568729 2216 ntBASIC19.07■□□□□ 0.64
NECTIN3Q9NQS3 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC19.07■□□□□ 0.64
NECTIN3Q9NQS3 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
NECTIN3Q9NQS3 NME6-213ENST00000451657 871 ntTSL 2 BASIC19.07■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms