Protein–RNA interactions for Protein: Q9HD45

TM9SF3, Transmembrane 9 superfamily member 3, humanhuman

Predictions only

Length 589 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3Q9HD45 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC20■□□□□ 0.79
TM9SF3Q9HD45 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
TM9SF3Q9HD45 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC20■□□□□ 0.79
TM9SF3Q9HD45 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
TM9SF3Q9HD45 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC20■□□□□ 0.79
TM9SF3Q9HD45 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC20■□□□□ 0.79
TM9SF3Q9HD45 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC20■□□□□ 0.79
TM9SF3Q9HD45 TSPY15P-201ENST00000457163 923 ntBASIC20■□□□□ 0.79
TM9SF3Q9HD45 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC20■□□□□ 0.79
TM9SF3Q9HD45 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC20■□□□□ 0.79
TM9SF3Q9HD45 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC20■□□□□ 0.79
TM9SF3Q9HD45 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC20■□□□□ 0.79
TM9SF3Q9HD45 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC20■□□□□ 0.79
TM9SF3Q9HD45 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
TM9SF3Q9HD45 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC20■□□□□ 0.79
TM9SF3Q9HD45 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC20■□□□□ 0.79
TM9SF3Q9HD45 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
TM9SF3Q9HD45 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC20■□□□□ 0.79
TM9SF3Q9HD45 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC20■□□□□ 0.79
TM9SF3Q9HD45 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC19.99■□□□□ 0.79
TM9SF3Q9HD45 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
TM9SF3Q9HD45 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC19.99■□□□□ 0.79
TM9SF3Q9HD45 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC19.99■□□□□ 0.79
TM9SF3Q9HD45 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
TM9SF3Q9HD45 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC19.99■□□□□ 0.79
TM9SF3Q9HD45 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC19.99■□□□□ 0.79
TM9SF3Q9HD45 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC19.99■□□□□ 0.79
TM9SF3Q9HD45 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
TM9SF3Q9HD45 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC19.99■□□□□ 0.79
TM9SF3Q9HD45 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC19.99■□□□□ 0.79
TM9SF3Q9HD45 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
TM9SF3Q9HD45 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
TM9SF3Q9HD45 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
TM9SF3Q9HD45 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
TM9SF3Q9HD45 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
TM9SF3Q9HD45 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
TM9SF3Q9HD45 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
TM9SF3Q9HD45 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
TM9SF3Q9HD45 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
TM9SF3Q9HD45 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
TM9SF3Q9HD45 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
TM9SF3Q9HD45 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
TM9SF3Q9HD45 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
TM9SF3Q9HD45 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
TM9SF3Q9HD45 MIR1224-201ENST00000408193 85 ntBASIC19.98■□□□□ 0.79
TM9SF3Q9HD45 PENK-204ENST00000518770 863 ntTSL 2 BASIC19.98■□□□□ 0.79
TM9SF3Q9HD45 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC19.98■□□□□ 0.79
TM9SF3Q9HD45 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
TM9SF3Q9HD45 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
TM9SF3Q9HD45 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
TM9SF3Q9HD45 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
TM9SF3Q9HD45 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
TM9SF3Q9HD45 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
TM9SF3Q9HD45 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC19.98■□□□□ 0.79
TM9SF3Q9HD45 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC19.98■□□□□ 0.79
TM9SF3Q9HD45 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
TM9SF3Q9HD45 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC19.98■□□□□ 0.79
TM9SF3Q9HD45 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
TM9SF3Q9HD45 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC19.98■□□□□ 0.79
TM9SF3Q9HD45 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC19.97■□□□□ 0.79
TM9SF3Q9HD45 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
TM9SF3Q9HD45 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
TM9SF3Q9HD45 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC19.97■□□□□ 0.79
TM9SF3Q9HD45 STAC-204ENST00000457375 1366 ntTSL 2 BASIC19.97■□□□□ 0.79
TM9SF3Q9HD45 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
TM9SF3Q9HD45 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
TM9SF3Q9HD45 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
TM9SF3Q9HD45 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
TM9SF3Q9HD45 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
TM9SF3Q9HD45 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC19.97■□□□□ 0.79
TM9SF3Q9HD45 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC19.97■□□□□ 0.79
TM9SF3Q9HD45 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
TM9SF3Q9HD45 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC19.97■□□□□ 0.79
TM9SF3Q9HD45 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
TM9SF3Q9HD45 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC19.97■□□□□ 0.79
TM9SF3Q9HD45 AC023632.3-201ENST00000521633 145 ntBASIC19.97■□□□□ 0.79
TM9SF3Q9HD45 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC19.97■□□□□ 0.79
TM9SF3Q9HD45 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
TM9SF3Q9HD45 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC19.97■□□□□ 0.79
TM9SF3Q9HD45 AL121829.2-201ENST00000620908 328 ntBASIC19.97■□□□□ 0.79
TM9SF3Q9HD45 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC19.97■□□□□ 0.79
TM9SF3Q9HD45 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
TM9SF3Q9HD45 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
TM9SF3Q9HD45 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
TM9SF3Q9HD45 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
TM9SF3Q9HD45 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC19.97■□□□□ 0.79
TM9SF3Q9HD45 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
TM9SF3Q9HD45 AC027702.1-201ENST00000563810 1770 ntBASIC19.96■□□□□ 0.79
TM9SF3Q9HD45 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC19.96■□□□□ 0.79
TM9SF3Q9HD45 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC19.96■□□□□ 0.79
TM9SF3Q9HD45 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
TM9SF3Q9HD45 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
TM9SF3Q9HD45 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
TM9SF3Q9HD45 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
TM9SF3Q9HD45 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC19.96■□□□□ 0.79
TM9SF3Q9HD45 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC19.96■□□□□ 0.79
TM9SF3Q9HD45 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
TM9SF3Q9HD45 SNX21-213ENST00000614929 587 ntTSL 5 BASIC19.96■□□□□ 0.79
TM9SF3Q9HD45 Six3os1_6.1-201ENST00000620790 196 ntBASIC19.96■□□□□ 0.79
TM9SF3Q9HD45 AC133561.5-201ENST00000635547 218 ntBASIC19.96■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms