Protein–RNA interactions for Protein: Q99385

VCX1, Vacuolar calcium ion transporter, yeastyeast

Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VCX1Q99385 HAL9YOL089C 3093 nt0.93□□□□□ -2.26
VCX1Q99385 RKR1YMR247C 4689 nt0.91□□□□□ -2.26
VCX1Q99385 YPR117WYPR117W 7470 nt0.91□□□□□ -2.26
VCX1Q99385 EMT1tM(CAU)D 73 nt0.91□□□□□ -2.26
VCX1Q99385 EMT5tM(CAU)J1 73 nt0.91□□□□□ -2.26
VCX1Q99385 EMT3tM(CAU)J2 73 nt0.91□□□□□ -2.26
VCX1Q99385 EMT4tM(CAU)M 73 nt0.91□□□□□ -2.26
VCX1Q99385 EMT2tM(CAU)O2 73 nt0.91□□□□□ -2.26
VCX1Q99385 snR52snR52 92 nt0.89□□□□□ -2.27
VCX1Q99385 YLR041WYLR041W 321 nt0.88□□□□□ -2.27
VCX1Q99385 UBP3YER151C 2739 nt0.88□□□□□ -2.27
VCX1Q99385 PRP42YDR235W 1635 nt0.88□□□□□ -2.27
VCX1Q99385 CHS6YJL099W 2241 nt0.87□□□□□ -2.27
VCX1Q99385 PRP5YBR237W 2550 nt0.86□□□□□ -2.27
VCX1Q99385 YDL073WYDL073W 2955 nt0.86□□□□□ -2.27
VCX1Q99385 tN(GUU)QtN(GUU)Q 71 nt0.85□□□□□ -2.27
VCX1Q99385 YJL182CYJL182C 318 nt0.85□□□□□ -2.27
VCX1Q99385 YLR342W-AYLR342W-A 174 nt0.85□□□□□ -2.27
VCX1Q99385 PAU24YBR301W 363 nt0.85□□□□□ -2.27
VCX1Q99385 snR46snR46 197 nt0.84□□□□□ -2.27
VCX1Q99385 TRS65YGR166W 1683 nt0.84□□□□□ -2.28
VCX1Q99385 BEM3YPL115C 3387 nt0.83□□□□□ -2.28
VCX1Q99385 YEL073CYEL073C 324 nt0.83□□□□□ -2.28
VCX1Q99385 SEC1YDR164C 2175 nt0.82□□□□□ -2.28
VCX1Q99385 YHR131W-AYHR131W-A 246 nt0.82□□□□□ -2.28
VCX1Q99385 OST4YDL232W 111 nt0.81□□□□□ -2.28
VCX1Q99385 PRP39YML046W 1890 nt0.8□□□□□ -2.28
VCX1Q99385 SNU13YEL026W 381 nt0.79□□□□□ -2.28
VCX1Q99385 YLR232WYLR232W 348 nt0.79□□□□□ -2.28
VCX1Q99385 TAH1YCR060W 336 nt0.78□□□□□ -2.28
VCX1Q99385 YJL127W-AYJL127W-A 117 nt0.78□□□□□ -2.28
VCX1Q99385 YSP1YHR155W 3687 nt0.78□□□□□ -2.29
VCX1Q99385 YNL337WYNL337W 255 nt0.77□□□□□ -2.29
VCX1Q99385 tF(GAA)BtF(GAA)B 73 nt0.75□□□□□ -2.29
VCX1Q99385 tF(GAA)FtF(GAA)F 73 nt0.75□□□□□ -2.29
VCX1Q99385 tF(GAA)GtF(GAA)G 73 nt0.75□□□□□ -2.29
VCX1Q99385 tF(GAA)H1tF(GAA)H1 73 nt0.75□□□□□ -2.29
VCX1Q99385 tF(GAA)H2tF(GAA)H2 73 nt0.75□□□□□ -2.29
VCX1Q99385 tF(GAA)MtF(GAA)M 73 nt0.75□□□□□ -2.29
VCX1Q99385 tF(GAA)P1tF(GAA)P1 73 nt0.75□□□□□ -2.29
VCX1Q99385 tF(GAA)P2tF(GAA)P2 73 nt0.75□□□□□ -2.29
VCX1Q99385 YJL150WYJL150W 303 nt0.75□□□□□ -2.29
VCX1Q99385 YBL039C-AYBL039C-A 84 nt0.74□□□□□ -2.29
VCX1Q99385 LTE1YAL024C 4308 nt0.74□□□□□ -2.29
VCX1Q99385 YGL182CYGL182C 324 nt0.73□□□□□ -2.29
VCX1Q99385 PAU12YGR294W 363 nt0.72□□□□□ -2.29
VCX1Q99385 YPR159C-AYPR159C-A 102 nt0.71□□□□□ -2.3
VCX1Q99385 PET111YMR257C 2403 nt0.71□□□□□ -2.3
VCX1Q99385 YOR381W-AYOR381W-A 168 nt0.7□□□□□ -2.3
VCX1Q99385 NNF2YGR089W 2811 nt0.7□□□□□ -2.3
VCX1Q99385 YDR544CYDR544C 429 nt0.69□□□□□ -2.3
VCX1Q99385 UTP20YBL004W 7482 nt0.69□□□□□ -2.3
VCX1Q99385 YLR466C-BYLR466C-B 117 nt0.68□□□□□ -2.3
VCX1Q99385 MYO1YHR023W 5787 nt0.67□□□□□ -2.3
VCX1Q99385 YOR192C-BYOR192C-B 5313 nt0.67□□□□□ -2.3
VCX1Q99385 YLL006W-AYLL006W-A 177 nt0.67□□□□□ -2.3
VCX1Q99385 YNL198CYNL198C 303 nt0.67□□□□□ -2.3
VCX1Q99385 YBR072C-AYBR072C-A 162 nt0.67□□□□□ -2.3
VCX1Q99385 YGR151CYGR151C 336 nt0.64□□□□□ -2.31
VCX1Q99385 YMR272W-AYMR272W-A 114 nt0.64□□□□□ -2.31
VCX1Q99385 YOR170WYOR170W 306 nt0.63□□□□□ -2.31
VCX1Q99385 UTP10YJL109C 5310 nt0.62□□□□□ -2.31
VCX1Q99385 QCR9YGR183C 201 nt0.62□□□□□ -2.31
VCX1Q99385 YMR160WYMR160W 2451 nt0.62□□□□□ -2.31
VCX1Q99385 GLG1YKR058W 1851 nt0.61□□□□□ -2.31
VCX1Q99385 SDH6YDR379C-A 240 nt0.61□□□□□ -2.31
VCX1Q99385 YKL145W-AYKL145W-A 93 nt0.61□□□□□ -2.31
VCX1Q99385 COG6YNL041C 2520 nt0.61□□□□□ -2.31
VCX1Q99385 ULP2YIL031W 3105 nt0.6□□□□□ -2.31
VCX1Q99385 tT(AGU)BtT(AGU)B 73 nt0.6□□□□□ -2.31
VCX1Q99385 tT(AGU)CtT(AGU)C 73 nt0.6□□□□□ -2.31
VCX1Q99385 tT(AGU)DtT(AGU)D 73 nt0.6□□□□□ -2.31
VCX1Q99385 tT(AGU)HtT(AGU)H 73 nt0.6□□□□□ -2.31
VCX1Q99385 tT(AGU)I1tT(AGU)I1 73 nt0.6□□□□□ -2.31
VCX1Q99385 tT(AGU)I2tT(AGU)I2 73 nt0.6□□□□□ -2.31
VCX1Q99385 tT(AGU)JtT(AGU)J 73 nt0.6□□□□□ -2.31
VCX1Q99385 tT(AGU)N1tT(AGU)N1 73 nt0.6□□□□□ -2.31
VCX1Q99385 tT(AGU)N2tT(AGU)N2 73 nt0.6□□□□□ -2.31
VCX1Q99385 tT(AGU)O1tT(AGU)O1 73 nt0.6□□□□□ -2.31
VCX1Q99385 tT(AGU)O2tT(AGU)O2 73 nt0.6□□□□□ -2.31
VCX1Q99385 YOL014WYOL014W 375 nt0.6□□□□□ -2.31
VCX1Q99385 YOR314W-AYOR314W-A 111 nt0.59□□□□□ -2.31
VCX1Q99385 MLP1YKR095W 5628 nt0.58□□□□□ -2.32
VCX1Q99385 NIP1YMR309C 2439 nt0.58□□□□□ -2.32
VCX1Q99385 Q0032Q0032 291 nt0.58□□□□□ -2.32
VCX1Q99385 YDR371C-AYDR371C-A 105 nt0.58□□□□□ -2.32
VCX1Q99385 RPS26AYGL189C 360 nt0.58□□□□□ -2.32
VCX1Q99385 YHL015W-AYHL015W-A 84 nt0.58□□□□□ -2.32
VCX1Q99385 YIL142C-AYIL142C-A 333 nt0.58□□□□□ -2.32
VCX1Q99385 YOR102WYOR102W 351 nt0.57□□□□□ -2.32
VCX1Q99385 tM(CAU)Q2tM(CAU)Q2 78 nt0.56□□□□□ -2.32
VCX1Q99385 snR48snR48 113 nt0.56□□□□□ -2.32
VCX1Q99385 CSE1YGL238W 2883 nt0.55□□□□□ -2.32
VCX1Q99385 SBH1YER087C-B 249 nt0.55□□□□□ -2.32
VCX1Q99385 YGL007C-AYGL007C-A 87 nt0.54□□□□□ -2.32
VCX1Q99385 YOR329W-AYOR329W-A 210 nt0.54□□□□□ -2.32
VCX1Q99385 YNL338WYNL338W 159 nt0.53□□□□□ -2.32
VCX1Q99385 YDR210WYDR210W 228 nt0.52□□□□□ -2.33
VCX1Q99385 ORC3YLL004W 1851 nt0.51□□□□□ -2.33
VCX1Q99385 BIR1YJR089W 2865 nt0.5□□□□□ -2.33
Retrieved 100 of 7,029 protein–RNA pairs in 28.1 ms