Protein–RNA interactions for Protein: Q96HC4

PDLIM5, PDZ and LIM domain protein 5, humanhuman

Known RBP Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5Q96HC4 STK25-204ENST00000405585 1643 ntTSL 2 BASIC19.54■□□□□ 0.72
PDLIM5Q96HC4 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PDLIM5Q96HC4 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PDLIM5Q96HC4 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
PDLIM5Q96HC4 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC19.53■□□□□ 0.72
PDLIM5Q96HC4 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC19.53■□□□□ 0.72
PDLIM5Q96HC4 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PDLIM5Q96HC4 AP001271.2-201ENST00000624018 1556 ntBASIC19.53■□□□□ 0.72
PDLIM5Q96HC4 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC19.53■□□□□ 0.72
PDLIM5Q96HC4 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
PDLIM5Q96HC4 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
PDLIM5Q96HC4 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PDLIM5Q96HC4 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
PDLIM5Q96HC4 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PDLIM5Q96HC4 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC19.53■□□□□ 0.72
PDLIM5Q96HC4 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC19.53■□□□□ 0.72
PDLIM5Q96HC4 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PDLIM5Q96HC4 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PDLIM5Q96HC4 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
PDLIM5Q96HC4 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
PDLIM5Q96HC4 AC006970.2-201ENST00000450065 779 ntBASIC19.53■□□□□ 0.72
PDLIM5Q96HC4 SERP1-205ENST00000487153 657 ntTSL 4 BASIC19.53■□□□□ 0.72
PDLIM5Q96HC4 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC19.53■□□□□ 0.72
PDLIM5Q96HC4 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PDLIM5Q96HC4 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC19.53■□□□□ 0.72
PDLIM5Q96HC4 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PDLIM5Q96HC4 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC19.53■□□□□ 0.72
PDLIM5Q96HC4 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PDLIM5Q96HC4 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
PDLIM5Q96HC4 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
PDLIM5Q96HC4 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
PDLIM5Q96HC4 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
PDLIM5Q96HC4 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
PDLIM5Q96HC4 MOK-233ENST00000524214 1539 ntTSL 2 BASIC19.52■□□□□ 0.72
PDLIM5Q96HC4 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC19.52■□□□□ 0.72
PDLIM5Q96HC4 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
PDLIM5Q96HC4 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
PDLIM5Q96HC4 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC19.52■□□□□ 0.72
PDLIM5Q96HC4 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC19.52■□□□□ 0.72
PDLIM5Q96HC4 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
PDLIM5Q96HC4 AC092118.2-201ENST00000613495 667 ntBASIC19.52■□□□□ 0.72
PDLIM5Q96HC4 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC19.52■□□□□ 0.72
PDLIM5Q96HC4 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC19.52■□□□□ 0.72
PDLIM5Q96HC4 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
PDLIM5Q96HC4 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
PDLIM5Q96HC4 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
PDLIM5Q96HC4 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.71
PDLIM5Q96HC4 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC19.51■□□□□ 0.71
PDLIM5Q96HC4 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
PDLIM5Q96HC4 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
PDLIM5Q96HC4 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PDLIM5Q96HC4 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
PDLIM5Q96HC4 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PDLIM5Q96HC4 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PDLIM5Q96HC4 GUSBP6-202ENST00000438529 1198 ntBASIC19.51■□□□□ 0.71
PDLIM5Q96HC4 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC19.51■□□□□ 0.71
PDLIM5Q96HC4 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
PDLIM5Q96HC4 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
PDLIM5Q96HC4 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC19.51■□□□□ 0.71
PDLIM5Q96HC4 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
PDLIM5Q96HC4 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
PDLIM5Q96HC4 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
PDLIM5Q96HC4 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC19.51■□□□□ 0.71
PDLIM5Q96HC4 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
PDLIM5Q96HC4 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PDLIM5Q96HC4 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
PDLIM5Q96HC4 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
PDLIM5Q96HC4 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PDLIM5Q96HC4 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PDLIM5Q96HC4 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PDLIM5Q96HC4 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
PDLIM5Q96HC4 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC19.51■□□□□ 0.71
PDLIM5Q96HC4 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC19.51■□□□□ 0.71
PDLIM5Q96HC4 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PDLIM5Q96HC4 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC19.5■□□□□ 0.71
PDLIM5Q96HC4 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PDLIM5Q96HC4 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PDLIM5Q96HC4 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PDLIM5Q96HC4 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
PDLIM5Q96HC4 SERPINH1P1-201ENST00000419794 1249 ntBASIC19.5■□□□□ 0.71
PDLIM5Q96HC4 NME6-213ENST00000451657 871 ntTSL 2 BASIC19.5■□□□□ 0.71
PDLIM5Q96HC4 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC19.5■□□□□ 0.71
PDLIM5Q96HC4 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC19.5■□□□□ 0.71
PDLIM5Q96HC4 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC19.5■□□□□ 0.71
PDLIM5Q96HC4 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
PDLIM5Q96HC4 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PDLIM5Q96HC4 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PDLIM5Q96HC4 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC19.5■□□□□ 0.71
PDLIM5Q96HC4 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC19.5■□□□□ 0.71
PDLIM5Q96HC4 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
PDLIM5Q96HC4 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC19.5■□□□□ 0.71
PDLIM5Q96HC4 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC19.49■□□□□ 0.71
PDLIM5Q96HC4 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
PDLIM5Q96HC4 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
PDLIM5Q96HC4 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
PDLIM5Q96HC4 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
PDLIM5Q96HC4 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
PDLIM5Q96HC4 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
PDLIM5Q96HC4 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PDLIM5Q96HC4 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC19.49■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms