Protein–RNA interactions for Protein: Q969W0

SPTSSA, Serine palmitoyltransferase small subunit A, humanhuman

Predictions only

Length 71 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSAQ969W0 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
SPTSSAQ969W0 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SPTSSAQ969W0 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC17.5■□□□□ 0.39
SPTSSAQ969W0 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
SPTSSAQ969W0 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC17.49■□□□□ 0.39
SPTSSAQ969W0 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
SPTSSAQ969W0 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
SPTSSAQ969W0 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC17.49■□□□□ 0.39
SPTSSAQ969W0 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
SPTSSAQ969W0 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC17.49■□□□□ 0.39
SPTSSAQ969W0 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SPTSSAQ969W0 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
SPTSSAQ969W0 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SPTSSAQ969W0 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
SPTSSAQ969W0 ISCU-212ENST00000547005 795 ntTSL 3 BASIC17.49■□□□□ 0.39
SPTSSAQ969W0 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC17.49■□□□□ 0.39
SPTSSAQ969W0 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
SPTSSAQ969W0 AC133552.2-202ENST00000575694 574 ntBASIC17.49■□□□□ 0.39
SPTSSAQ969W0 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
SPTSSAQ969W0 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
SPTSSAQ969W0 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC17.49■□□□□ 0.39
SPTSSAQ969W0 AC092437.1-201ENST00000624794 1048 ntBASIC17.49■□□□□ 0.39
SPTSSAQ969W0 AC073111.5-205ENST00000641717 521 ntBASIC17.49■□□□□ 0.39
SPTSSAQ969W0 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
SPTSSAQ969W0 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
SPTSSAQ969W0 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC17.49■□□□□ 0.39
SPTSSAQ969W0 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SPTSSAQ969W0 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
SPTSSAQ969W0 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
SPTSSAQ969W0 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC17.49■□□□□ 0.39
SPTSSAQ969W0 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
SPTSSAQ969W0 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC17.48■□□□□ 0.39
SPTSSAQ969W0 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SPTSSAQ969W0 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SPTSSAQ969W0 KRT8P20-201ENST00000423953 1409 ntBASIC17.48■□□□□ 0.39
SPTSSAQ969W0 KRT8P17-201ENST00000453110 1448 ntBASIC17.48■□□□□ 0.39
SPTSSAQ969W0 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
SPTSSAQ969W0 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
SPTSSAQ969W0 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SPTSSAQ969W0 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SPTSSAQ969W0 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
SPTSSAQ969W0 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC17.48■□□□□ 0.39
SPTSSAQ969W0 HLA-G-202ENST00000376815 851 ntBASIC17.48■□□□□ 0.39
SPTSSAQ969W0 HLA-G-203ENST00000376818 1127 ntBASIC17.48■□□□□ 0.39
SPTSSAQ969W0 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
SPTSSAQ969W0 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
SPTSSAQ969W0 LSM12P1-201ENST00000411836 588 ntBASIC17.48■□□□□ 0.39
SPTSSAQ969W0 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC17.48■□□□□ 0.39
SPTSSAQ969W0 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC17.48■□□□□ 0.39
SPTSSAQ969W0 IKBKGP1-201ENST00000612193 1073 ntBASIC17.48■□□□□ 0.39
SPTSSAQ969W0 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC17.48■□□□□ 0.39
SPTSSAQ969W0 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
SPTSSAQ969W0 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
SPTSSAQ969W0 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
SPTSSAQ969W0 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SPTSSAQ969W0 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC17.48■□□□□ 0.39
SPTSSAQ969W0 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC17.48■□□□□ 0.39
SPTSSAQ969W0 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
SPTSSAQ969W0 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
SPTSSAQ969W0 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
SPTSSAQ969W0 KRT16P6-202ENST00000425692 1426 ntBASIC17.47■□□□□ 0.39
SPTSSAQ969W0 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
SPTSSAQ969W0 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
SPTSSAQ969W0 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC17.47■□□□□ 0.39
SPTSSAQ969W0 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC17.47■□□□□ 0.39
SPTSSAQ969W0 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC17.47■□□□□ 0.39
SPTSSAQ969W0 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
SPTSSAQ969W0 AC026185.1-201ENST00000445748 174 ntBASIC17.47■□□□□ 0.39
SPTSSAQ969W0 AC093787.1-201ENST00000450396 207 ntBASIC17.47■□□□□ 0.39
SPTSSAQ969W0 AL031963.3-201ENST00000606441 850 ntBASIC17.47■□□□□ 0.39
SPTSSAQ969W0 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
SPTSSAQ969W0 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SPTSSAQ969W0 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
SPTSSAQ969W0 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
SPTSSAQ969W0 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC17.47■□□□□ 0.39
SPTSSAQ969W0 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SPTSSAQ969W0 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
SPTSSAQ969W0 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
SPTSSAQ969W0 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC17.47■□□□□ 0.39
SPTSSAQ969W0 NXN-202ENST00000537628 1340 ntTSL 3 BASIC17.47■□□□□ 0.39
SPTSSAQ969W0 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
SPTSSAQ969W0 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC17.46■□□□□ 0.39
SPTSSAQ969W0 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC17.46■□□□□ 0.39
SPTSSAQ969W0 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
SPTSSAQ969W0 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC17.46■□□□□ 0.39
SPTSSAQ969W0 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SPTSSAQ969W0 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC17.46■□□□□ 0.39
SPTSSAQ969W0 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC17.46■□□□□ 0.39
SPTSSAQ969W0 C2orf69P4-201ENST00000565394 541 ntBASIC17.46■□□□□ 0.39
SPTSSAQ969W0 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC17.46■□□□□ 0.39
SPTSSAQ969W0 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SPTSSAQ969W0 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SPTSSAQ969W0 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SPTSSAQ969W0 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SPTSSAQ969W0 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
SPTSSAQ969W0 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SPTSSAQ969W0 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
SPTSSAQ969W0 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SPTSSAQ969W0 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
SPTSSAQ969W0 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms