Protein–RNA interactions for Protein: Q969K3

RNF34, E3 ubiquitin-protein ligase RNF34, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF34Q969K3 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
RNF34Q969K3 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
RNF34Q969K3 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
RNF34Q969K3 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
RNF34Q969K3 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC20.88■□□□□ 0.93
RNF34Q969K3 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
RNF34Q969K3 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
RNF34Q969K3 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC20.88■□□□□ 0.93
RNF34Q969K3 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
RNF34Q969K3 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC20.88■□□□□ 0.93
RNF34Q969K3 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC20.88■□□□□ 0.93
RNF34Q969K3 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
RNF34Q969K3 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC20.88■□□□□ 0.93
RNF34Q969K3 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
RNF34Q969K3 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC20.88■□□□□ 0.93
RNF34Q969K3 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
RNF34Q969K3 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC20.88■□□□□ 0.93
RNF34Q969K3 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
RNF34Q969K3 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
RNF34Q969K3 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
RNF34Q969K3 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
RNF34Q969K3 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
RNF34Q969K3 KRT8P20-201ENST00000423953 1409 ntBASIC20.87■□□□□ 0.93
RNF34Q969K3 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC20.87■□□□□ 0.93
RNF34Q969K3 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
RNF34Q969K3 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
RNF34Q969K3 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
RNF34Q969K3 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
RNF34Q969K3 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
RNF34Q969K3 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
RNF34Q969K3 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC20.87■□□□□ 0.93
RNF34Q969K3 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
RNF34Q969K3 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
RNF34Q969K3 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC20.87■□□□□ 0.93
RNF34Q969K3 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC20.87■□□□□ 0.93
RNF34Q969K3 OR2A1-AS1-207ENST00000486094 819 ntBASIC20.87■□□□□ 0.93
RNF34Q969K3 AC023632.3-201ENST00000521633 145 ntBASIC20.87■□□□□ 0.93
RNF34Q969K3 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC20.87■□□□□ 0.93
RNF34Q969K3 AC006557.6-201ENST00000623071 864 ntBASIC20.87■□□□□ 0.93
RNF34Q969K3 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC20.87■□□□□ 0.93
RNF34Q969K3 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
RNF34Q969K3 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
RNF34Q969K3 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC20.87■□□□□ 0.93
RNF34Q969K3 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
RNF34Q969K3 KRT8P17-201ENST00000453110 1448 ntBASIC20.87■□□□□ 0.93
RNF34Q969K3 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
RNF34Q969K3 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
RNF34Q969K3 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
RNF34Q969K3 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
RNF34Q969K3 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
RNF34Q969K3 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
RNF34Q969K3 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC20.86■□□□□ 0.93
RNF34Q969K3 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
RNF34Q969K3 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
RNF34Q969K3 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
RNF34Q969K3 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC20.86■□□□□ 0.93
RNF34Q969K3 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC20.86■□□□□ 0.93
RNF34Q969K3 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC20.86■□□□□ 0.93
RNF34Q969K3 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC20.86■□□□□ 0.93
RNF34Q969K3 AL031963.3-201ENST00000606441 850 ntBASIC20.86■□□□□ 0.93
RNF34Q969K3 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
RNF34Q969K3 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
RNF34Q969K3 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC20.86■□□□□ 0.93
RNF34Q969K3 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
RNF34Q969K3 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC20.86■□□□□ 0.93
RNF34Q969K3 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
RNF34Q969K3 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC20.86■□□□□ 0.93
RNF34Q969K3 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
RNF34Q969K3 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
RNF34Q969K3 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
RNF34Q969K3 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
RNF34Q969K3 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC20.85■□□□□ 0.93
RNF34Q969K3 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
RNF34Q969K3 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
RNF34Q969K3 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
RNF34Q969K3 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC20.85■□□□□ 0.93
RNF34Q969K3 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
RNF34Q969K3 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
RNF34Q969K3 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
RNF34Q969K3 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
RNF34Q969K3 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
RNF34Q969K3 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC20.85■□□□□ 0.93
RNF34Q969K3 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC20.85■□□□□ 0.93
RNF34Q969K3 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
RNF34Q969K3 AC005829.2-201ENST00000571422 1056 ntBASIC20.85■□□□□ 0.93
RNF34Q969K3 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
RNF34Q969K3 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC20.85■□□□□ 0.93
RNF34Q969K3 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
RNF34Q969K3 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
RNF34Q969K3 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
RNF34Q969K3 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
RNF34Q969K3 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
RNF34Q969K3 PTBP1P-201ENST00000554374 1601 ntBASIC20.85■□□□□ 0.93
RNF34Q969K3 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC20.85■□□□□ 0.93
RNF34Q969K3 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC20.85■□□□□ 0.93
RNF34Q969K3 AL512408.1-201ENST00000569378 2000 ntBASIC20.85■□□□□ 0.93
RNF34Q969K3 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC20.85■□□□□ 0.93
RNF34Q969K3 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
RNF34Q969K3 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC20.84■□□□□ 0.93
RNF34Q969K3 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC20.84■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms