Protein–RNA interactions for Protein: Q92600

CNOT9, CCR4-NOT transcription complex subunit 9, humanhuman

Known RBP Predictions only

Length 299 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9Q92600 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
CNOT9Q92600 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
CNOT9Q92600 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC18.4■□□□□ 0.54
CNOT9Q92600 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC18.4■□□□□ 0.54
CNOT9Q92600 AF201337.1-201ENST00000520239 748 ntBASIC18.4■□□□□ 0.54
CNOT9Q92600 PHB2-213ENST00000546111 858 ntTSL 2 BASIC18.4■□□□□ 0.54
CNOT9Q92600 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC18.4■□□□□ 0.54
CNOT9Q92600 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CNOT9Q92600 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
CNOT9Q92600 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
CNOT9Q92600 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC18.4■□□□□ 0.54
CNOT9Q92600 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CNOT9Q92600 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CNOT9Q92600 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CNOT9Q92600 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
CNOT9Q92600 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CNOT9Q92600 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CNOT9Q92600 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC18.39■□□□□ 0.54
CNOT9Q92600 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CNOT9Q92600 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC18.39■□□□□ 0.53
CNOT9Q92600 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
CNOT9Q92600 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CNOT9Q92600 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CNOT9Q92600 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC18.39■□□□□ 0.53
CNOT9Q92600 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC18.39■□□□□ 0.53
CNOT9Q92600 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CNOT9Q92600 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CNOT9Q92600 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CNOT9Q92600 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CNOT9Q92600 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CNOT9Q92600 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC18.39■□□□□ 0.53
CNOT9Q92600 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC18.39■□□□□ 0.53
CNOT9Q92600 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CNOT9Q92600 MKRN4P-201ENST00000444706 1521 ntBASIC18.39■□□□□ 0.53
CNOT9Q92600 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC18.39■□□□□ 0.53
CNOT9Q92600 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CNOT9Q92600 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
CNOT9Q92600 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC18.38■□□□□ 0.53
CNOT9Q92600 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CNOT9Q92600 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC18.38■□□□□ 0.53
CNOT9Q92600 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CNOT9Q92600 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CNOT9Q92600 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC18.38■□□□□ 0.53
CNOT9Q92600 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CNOT9Q92600 LSM12P1-201ENST00000411836 588 ntBASIC18.38■□□□□ 0.53
CNOT9Q92600 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC18.38■□□□□ 0.53
CNOT9Q92600 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC18.38■□□□□ 0.53
CNOT9Q92600 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC18.38■□□□□ 0.53
CNOT9Q92600 C2orf69P4-201ENST00000565394 541 ntBASIC18.38■□□□□ 0.53
CNOT9Q92600 MARS-234ENST00000630571 216 ntTSL 5 BASIC18.38■□□□□ 0.53
CNOT9Q92600 MARS-235ENST00000630803 183 ntTSL 3 BASIC18.38■□□□□ 0.53
CNOT9Q92600 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CNOT9Q92600 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC18.38■□□□□ 0.53
CNOT9Q92600 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
CNOT9Q92600 LBX2-AS1-202ENST00000603175 2083 ntBASIC18.38■□□□□ 0.53
CNOT9Q92600 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC18.38■□□□□ 0.53
CNOT9Q92600 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CNOT9Q92600 KRT8P17-201ENST00000453110 1448 ntBASIC18.38■□□□□ 0.53
CNOT9Q92600 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CNOT9Q92600 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CNOT9Q92600 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CNOT9Q92600 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
CNOT9Q92600 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC18.38■□□□□ 0.53
CNOT9Q92600 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CNOT9Q92600 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CNOT9Q92600 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CNOT9Q92600 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
CNOT9Q92600 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
CNOT9Q92600 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
CNOT9Q92600 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC18.37■□□□□ 0.53
CNOT9Q92600 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CNOT9Q92600 METTL15-202ENST00000403099 795 ntTSL 5 BASIC18.37■□□□□ 0.53
CNOT9Q92600 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC18.37■□□□□ 0.53
CNOT9Q92600 BRWD1-AS2-201ENST00000603064 1028 ntBASIC18.37■□□□□ 0.53
CNOT9Q92600 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
CNOT9Q92600 CD37-204ENST00000535669 1674 ntTSL 2 BASIC18.37■□□□□ 0.53
CNOT9Q92600 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
CNOT9Q92600 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
CNOT9Q92600 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CNOT9Q92600 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC18.37■□□□□ 0.53
CNOT9Q92600 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CNOT9Q92600 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CNOT9Q92600 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC18.37■□□□□ 0.53
CNOT9Q92600 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CNOT9Q92600 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CNOT9Q92600 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC18.36■□□□□ 0.53
CNOT9Q92600 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CNOT9Q92600 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC18.36■□□□□ 0.53
CNOT9Q92600 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CNOT9Q92600 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC18.36■□□□□ 0.53
CNOT9Q92600 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CNOT9Q92600 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CNOT9Q92600 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC18.36■□□□□ 0.53
CNOT9Q92600 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CNOT9Q92600 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC18.36■□□□□ 0.53
CNOT9Q92600 BX276092.2-201ENST00000417668 665 ntBASIC18.36■□□□□ 0.53
CNOT9Q92600 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CNOT9Q92600 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CNOT9Q92600 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
CNOT9Q92600 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC18.36■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 10.8 ms