Protein–RNA interactions for Protein: Q8WVD3

RNF138, E3 ubiquitin-protein ligase RNF138, humanhuman

Predictions only

Length 245 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF138Q8WVD3 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC18.14■□□□□ 0.49
RNF138Q8WVD3 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
RNF138Q8WVD3 FAM201B-201ENST00000458407 597 ntBASIC18.14■□□□□ 0.49
RNF138Q8WVD3 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
RNF138Q8WVD3 AL691432.2-201ENST00000607222 2038 ntBASIC18.14■□□□□ 0.49
RNF138Q8WVD3 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC18.14■□□□□ 0.49
RNF138Q8WVD3 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
RNF138Q8WVD3 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RNF138Q8WVD3 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
RNF138Q8WVD3 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
RNF138Q8WVD3 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RNF138Q8WVD3 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
RNF138Q8WVD3 TFP1-202ENST00000475455 1573 ntBASIC18.13■□□□□ 0.49
RNF138Q8WVD3 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC18.13■□□□□ 0.49
RNF138Q8WVD3 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
RNF138Q8WVD3 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
RNF138Q8WVD3 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC18.13■□□□□ 0.49
RNF138Q8WVD3 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
RNF138Q8WVD3 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC18.13■□□□□ 0.49
RNF138Q8WVD3 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC18.13■□□□□ 0.49
RNF138Q8WVD3 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC18.13■□□□□ 0.49
RNF138Q8WVD3 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC18.13■□□□□ 0.49
RNF138Q8WVD3 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
RNF138Q8WVD3 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RNF138Q8WVD3 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
RNF138Q8WVD3 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC18.13■□□□□ 0.49
RNF138Q8WVD3 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
RNF138Q8WVD3 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC18.12■□□□□ 0.49
RNF138Q8WVD3 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
RNF138Q8WVD3 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
RNF138Q8WVD3 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC18.12■□□□□ 0.49
RNF138Q8WVD3 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
RNF138Q8WVD3 PRORSD1P-201ENST00000295112 541 ntBASIC18.12■□□□□ 0.49
RNF138Q8WVD3 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
RNF138Q8WVD3 THEM4-205ENST00000489410 643 ntTSL 2 BASIC18.12■□□□□ 0.49
RNF138Q8WVD3 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC18.12■□□□□ 0.49
RNF138Q8WVD3 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC18.12■□□□□ 0.49
RNF138Q8WVD3 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
RNF138Q8WVD3 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC18.12■□□□□ 0.49
RNF138Q8WVD3 RN7SL471P-201ENST00000580476 299 ntBASIC18.12■□□□□ 0.49
RNF138Q8WVD3 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC18.12■□□□□ 0.49
RNF138Q8WVD3 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
RNF138Q8WVD3 MMD2-204ENST00000612910 778 ntTSL 5 BASIC18.12■□□□□ 0.49
RNF138Q8WVD3 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
RNF138Q8WVD3 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
RNF138Q8WVD3 AC018553.1-201ENST00000616682 1458 ntBASIC18.12■□□□□ 0.49
RNF138Q8WVD3 AC009237.14-201ENST00000609975 1594 ntBASIC18.12■□□□□ 0.49
RNF138Q8WVD3 GOLGA2P11-201ENST00000562660 1621 ntBASIC18.12■□□□□ 0.49
RNF138Q8WVD3 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
RNF138Q8WVD3 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
RNF138Q8WVD3 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC18.12■□□□□ 0.49
RNF138Q8WVD3 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC18.12■□□□□ 0.49
RNF138Q8WVD3 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC18.11■□□□□ 0.49
RNF138Q8WVD3 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RNF138Q8WVD3 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
RNF138Q8WVD3 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC18.11■□□□□ 0.49
RNF138Q8WVD3 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
RNF138Q8WVD3 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
RNF138Q8WVD3 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
RNF138Q8WVD3 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RNF138Q8WVD3 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
RNF138Q8WVD3 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
RNF138Q8WVD3 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC18.11■□□□□ 0.49
RNF138Q8WVD3 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC18.11■□□□□ 0.49
RNF138Q8WVD3 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC18.11■□□□□ 0.49
RNF138Q8WVD3 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
RNF138Q8WVD3 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC18.11■□□□□ 0.49
RNF138Q8WVD3 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC18.11■□□□□ 0.49
RNF138Q8WVD3 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC18.11■□□□□ 0.49
RNF138Q8WVD3 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC18.11■□□□□ 0.49
RNF138Q8WVD3 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
RNF138Q8WVD3 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
RNF138Q8WVD3 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
RNF138Q8WVD3 AP001271.2-201ENST00000624018 1556 ntBASIC18.11■□□□□ 0.49
RNF138Q8WVD3 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
RNF138Q8WVD3 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC18.11■□□□□ 0.49
RNF138Q8WVD3 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC18.11■□□□□ 0.49
RNF138Q8WVD3 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC18.11■□□□□ 0.49
RNF138Q8WVD3 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
RNF138Q8WVD3 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RNF138Q8WVD3 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RNF138Q8WVD3 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
RNF138Q8WVD3 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
RNF138Q8WVD3 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RNF138Q8WVD3 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RNF138Q8WVD3 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RNF138Q8WVD3 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
RNF138Q8WVD3 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
RNF138Q8WVD3 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
RNF138Q8WVD3 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
RNF138Q8WVD3 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RNF138Q8WVD3 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
RNF138Q8WVD3 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
RNF138Q8WVD3 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
RNF138Q8WVD3 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RNF138Q8WVD3 SERF2-207ENST00000409614 582 ntTSL 2 BASIC18.1■□□□□ 0.49
RNF138Q8WVD3 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC18.1■□□□□ 0.49
RNF138Q8WVD3 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC18.1■□□□□ 0.49
RNF138Q8WVD3 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC18.1■□□□□ 0.49
RNF138Q8WVD3 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 11.5 ms