Protein–RNA interactions for Protein: Q8TBC4

UBA3, NEDD8-activating enzyme E1 catalytic subunit, humanhuman

Predictions only

Length 463 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3Q8TBC4 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC21.18■□□□□ 0.98
UBA3Q8TBC4 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
UBA3Q8TBC4 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
UBA3Q8TBC4 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC21.18■□□□□ 0.98
UBA3Q8TBC4 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC21.18■□□□□ 0.98
UBA3Q8TBC4 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
UBA3Q8TBC4 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
UBA3Q8TBC4 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
UBA3Q8TBC4 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC21.17■□□□□ 0.98
UBA3Q8TBC4 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
UBA3Q8TBC4 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
UBA3Q8TBC4 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
UBA3Q8TBC4 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC21.17■□□□□ 0.98
UBA3Q8TBC4 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
UBA3Q8TBC4 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC21.17■□□□□ 0.98
UBA3Q8TBC4 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC21.17■□□□□ 0.98
UBA3Q8TBC4 AL390719.1-204ENST00000412397 1219 ntBASIC21.17■□□□□ 0.98
UBA3Q8TBC4 CD99P1-205ENST00000527459 561 ntBASIC21.17■□□□□ 0.98
UBA3Q8TBC4 BX119927.1-201ENST00000636596 1552 ntBASIC21.17■□□□□ 0.98
UBA3Q8TBC4 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
UBA3Q8TBC4 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC21.17■□□□□ 0.98
UBA3Q8TBC4 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC21.17■□□□□ 0.98
UBA3Q8TBC4 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
UBA3Q8TBC4 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
UBA3Q8TBC4 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC21.17■□□□□ 0.98
UBA3Q8TBC4 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
UBA3Q8TBC4 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
UBA3Q8TBC4 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC21.17■□□□□ 0.98
UBA3Q8TBC4 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
UBA3Q8TBC4 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
UBA3Q8TBC4 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
UBA3Q8TBC4 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
UBA3Q8TBC4 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
UBA3Q8TBC4 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC21.16■□□□□ 0.98
UBA3Q8TBC4 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
UBA3Q8TBC4 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC21.16■□□□□ 0.98
UBA3Q8TBC4 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC21.16■□□□□ 0.98
UBA3Q8TBC4 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
UBA3Q8TBC4 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC21.16■□□□□ 0.98
UBA3Q8TBC4 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC21.16■□□□□ 0.98
UBA3Q8TBC4 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC21.16■□□□□ 0.98
UBA3Q8TBC4 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC21.16■□□□□ 0.98
UBA3Q8TBC4 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC21.16■□□□□ 0.98
UBA3Q8TBC4 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC21.16■□□□□ 0.98
UBA3Q8TBC4 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC21.16■□□□□ 0.98
UBA3Q8TBC4 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
UBA3Q8TBC4 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
UBA3Q8TBC4 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
UBA3Q8TBC4 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC21.16■□□□□ 0.98
UBA3Q8TBC4 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
UBA3Q8TBC4 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
UBA3Q8TBC4 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
UBA3Q8TBC4 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
UBA3Q8TBC4 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC21.15■□□□□ 0.98
UBA3Q8TBC4 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
UBA3Q8TBC4 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC21.15■□□□□ 0.98
UBA3Q8TBC4 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC21.15■□□□□ 0.98
UBA3Q8TBC4 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
UBA3Q8TBC4 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC21.15■□□□□ 0.98
UBA3Q8TBC4 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
UBA3Q8TBC4 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
UBA3Q8TBC4 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC21.15■□□□□ 0.98
UBA3Q8TBC4 OR2A1-AS1-207ENST00000486094 819 ntBASIC21.15■□□□□ 0.98
UBA3Q8TBC4 HES2-206ENST00000489730 730 ntTSL 2 BASIC21.15■□□□□ 0.98
UBA3Q8TBC4 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
UBA3Q8TBC4 UNC93B5-201ENST00000530315 699 ntBASIC21.15■□□□□ 0.98
UBA3Q8TBC4 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC21.15■□□□□ 0.98
UBA3Q8TBC4 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
UBA3Q8TBC4 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC21.15■□□□□ 0.98
UBA3Q8TBC4 SOX15-203ENST00000570788 1093 ntBASIC21.15■□□□□ 0.98
UBA3Q8TBC4 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC21.15■□□□□ 0.98
UBA3Q8TBC4 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
UBA3Q8TBC4 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
UBA3Q8TBC4 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC21.15■□□□□ 0.98
UBA3Q8TBC4 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC21.15■□□□□ 0.98
UBA3Q8TBC4 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
UBA3Q8TBC4 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
UBA3Q8TBC4 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC21.14■□□□□ 0.98
UBA3Q8TBC4 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC21.14■□□□□ 0.98
UBA3Q8TBC4 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.98
UBA3Q8TBC4 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
UBA3Q8TBC4 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
UBA3Q8TBC4 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
UBA3Q8TBC4 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC21.14■□□□□ 0.97
UBA3Q8TBC4 GAS7-202ENST00000396115 929 ntTSL 5 BASIC21.14■□□□□ 0.97
UBA3Q8TBC4 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC21.14■□□□□ 0.97
UBA3Q8TBC4 MIR4651-201ENST00000582622 73 ntBASIC21.14■□□□□ 0.97
UBA3Q8TBC4 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
UBA3Q8TBC4 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC21.14■□□□□ 0.97
UBA3Q8TBC4 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC21.14■□□□□ 0.97
UBA3Q8TBC4 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
UBA3Q8TBC4 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
UBA3Q8TBC4 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC21.14■□□□□ 0.97
UBA3Q8TBC4 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
UBA3Q8TBC4 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC21.14■□□□□ 0.97
UBA3Q8TBC4 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
UBA3Q8TBC4 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC21.13■□□□□ 0.97
UBA3Q8TBC4 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
UBA3Q8TBC4 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
UBA3Q8TBC4 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 99.5 ms