Protein–RNA interactions for Protein: Q8NE35

CPEB3, Cytoplasmic polyadenylation element-binding protein 3, humanhuman

Known RBP Predictions only

Length 698 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPEB3Q8NE35 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
CPEB3Q8NE35 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CPEB3Q8NE35 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CPEB3Q8NE35 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC17.48■□□□□ 0.39
CPEB3Q8NE35 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CPEB3Q8NE35 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
CPEB3Q8NE35 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC17.48■□□□□ 0.39
CPEB3Q8NE35 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CPEB3Q8NE35 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CPEB3Q8NE35 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
CPEB3Q8NE35 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC17.47■□□□□ 0.39
CPEB3Q8NE35 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
CPEB3Q8NE35 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CPEB3Q8NE35 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC17.47■□□□□ 0.39
CPEB3Q8NE35 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC17.47■□□□□ 0.39
CPEB3Q8NE35 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CPEB3Q8NE35 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC17.47■□□□□ 0.39
CPEB3Q8NE35 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CPEB3Q8NE35 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CPEB3Q8NE35 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC17.47■□□□□ 0.39
CPEB3Q8NE35 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CPEB3Q8NE35 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CPEB3Q8NE35 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC17.47■□□□□ 0.39
CPEB3Q8NE35 SERP1-205ENST00000487153 657 ntTSL 4 BASIC17.47■□□□□ 0.39
CPEB3Q8NE35 EMC9-206ENST00000560403 872 ntTSL 2 BASIC17.47■□□□□ 0.39
CPEB3Q8NE35 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC17.47■□□□□ 0.39
CPEB3Q8NE35 AC083880.1-201ENST00000608266 535 ntBASIC17.47■□□□□ 0.39
CPEB3Q8NE35 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CPEB3Q8NE35 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
CPEB3Q8NE35 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC17.47■□□□□ 0.39
CPEB3Q8NE35 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC17.47■□□□□ 0.39
CPEB3Q8NE35 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC17.47■□□□□ 0.39
CPEB3Q8NE35 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC17.47■□□□□ 0.39
CPEB3Q8NE35 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
CPEB3Q8NE35 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CPEB3Q8NE35 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CPEB3Q8NE35 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CPEB3Q8NE35 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC17.47■□□□□ 0.39
CPEB3Q8NE35 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
CPEB3Q8NE35 KRT8P17-201ENST00000453110 1448 ntBASIC17.47■□□□□ 0.39
CPEB3Q8NE35 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC17.46■□□□□ 0.39
CPEB3Q8NE35 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
CPEB3Q8NE35 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CPEB3Q8NE35 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC17.46■□□□□ 0.39
CPEB3Q8NE35 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
CPEB3Q8NE35 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC17.46■□□□□ 0.39
CPEB3Q8NE35 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CPEB3Q8NE35 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
CPEB3Q8NE35 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC17.46■□□□□ 0.39
CPEB3Q8NE35 GATS-209ENST00000454084 1030 ntTSL 3 BASIC17.46■□□□□ 0.39
CPEB3Q8NE35 RGMA-211ENST00000557420 989 ntTSL 3 BASIC17.46■□□□□ 0.39
CPEB3Q8NE35 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC17.46■□□□□ 0.39
CPEB3Q8NE35 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC17.46■□□□□ 0.39
CPEB3Q8NE35 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CPEB3Q8NE35 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC17.46■□□□□ 0.39
CPEB3Q8NE35 MOK-233ENST00000524214 1539 ntTSL 2 BASIC17.46■□□□□ 0.39
CPEB3Q8NE35 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CPEB3Q8NE35 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
CPEB3Q8NE35 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
CPEB3Q8NE35 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
CPEB3Q8NE35 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC17.45■□□□□ 0.38
CPEB3Q8NE35 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CPEB3Q8NE35 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CPEB3Q8NE35 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
CPEB3Q8NE35 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CPEB3Q8NE35 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CPEB3Q8NE35 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CPEB3Q8NE35 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CPEB3Q8NE35 CRK-204ENST00000574295 1391 ntTSL 5 BASIC17.45■□□□□ 0.38
CPEB3Q8NE35 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CPEB3Q8NE35 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC17.45■□□□□ 0.38
CPEB3Q8NE35 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CPEB3Q8NE35 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC17.45■□□□□ 0.38
CPEB3Q8NE35 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC17.45■□□□□ 0.38
CPEB3Q8NE35 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
CPEB3Q8NE35 PCDHAC2-203ENST00000615316 3011 ntBASIC17.45■□□□□ 0.38
CPEB3Q8NE35 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC17.45■□□□□ 0.38
CPEB3Q8NE35 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CPEB3Q8NE35 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC17.45■□□□□ 0.38
CPEB3Q8NE35 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CPEB3Q8NE35 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
CPEB3Q8NE35 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CPEB3Q8NE35 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
CPEB3Q8NE35 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
CPEB3Q8NE35 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CPEB3Q8NE35 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
CPEB3Q8NE35 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CPEB3Q8NE35 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
CPEB3Q8NE35 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC17.44■□□□□ 0.38
CPEB3Q8NE35 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
CPEB3Q8NE35 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
CPEB3Q8NE35 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC17.44■□□□□ 0.38
CPEB3Q8NE35 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC17.44■□□□□ 0.38
CPEB3Q8NE35 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
CPEB3Q8NE35 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC17.44■□□□□ 0.38
CPEB3Q8NE35 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CPEB3Q8NE35 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CPEB3Q8NE35 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CPEB3Q8NE35 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC17.44■□□□□ 0.38
CPEB3Q8NE35 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms